RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 SOCS7O14512 581 aa18.86■□□□□ 0.61
IRF1-204ENST00000439555 DMRT2Q9Y5R5 561 aa18.86■□□□□ 0.61
IRF1-204ENST00000439555 FMN1Q68DA7 1419 aa18.83■□□□□ 0.61
IRF1-204ENST00000439555 HECW1Q76N89 1606 aa18.83■□□□□ 0.61
IRF1-204ENST00000439555 STRCQ7RTU9 1775 aa18.83■□□□□ 0.6
IRF1-204ENST00000439555 YEATS2Q9ULM3 1422 aa18.82■□□□□ 0.6
IRF1-204ENST00000439555 ARHGEF12Q9NZN5 1544 aa18.81■□□□□ 0.6
IRF1-204ENST00000439555 EHMT2Q96KQ7 1210 aa18.81■□□□□ 0.6
IRF1-204ENST00000439555 ARHGAP35Q9NRY4 1499 aa18.8■□□□□ 0.6
IRF1-204ENST00000439555 ILDR2Q71H61 639 aa18.8■□□□□ 0.6
IRF1-204ENST00000439555 DISP3Q9P2K9 1392 aa18.8■□□□□ 0.6
IRF1-204ENST00000439555 PLPPR3Q6T4P5 718 aa18.79■□□□□ 0.6
IRF1-204ENST00000439555 ATP10AO60312 1499 aa18.78■□□□□ 0.6
IRF1-204ENST00000439555 PLCH2O75038 1416 aa18.76■□□□□ 0.59
IRF1-204ENST00000439555 MLECQ14165 292 aa18.76■□□□□ 0.59
IRF1-204ENST00000439555 CDK11AQ9UQ88 783 aaPredicted RBP18.76■□□□□ 0.59
IRF1-204ENST00000439555 SCAPERQ9BY12 1400 aa18.75■□□□□ 0.59
IRF1-204ENST00000439555 C9orf84Q5VXU9 1444 aa18.74■□□□□ 0.59
IRF1-204ENST00000439555 MYO5CQ9NQX4 1742 aa18.71■□□□□ 0.59
IRF1-204ENST00000439555 ATP1B4Q9UN42 357 aaPredicted RBP18.71■□□□□ 0.59
IRF1-204ENST00000439555 PTPRTO14522 1441 aa18.71■□□□□ 0.59
IRF1-204ENST00000439555 CDK13Q14004 1512 aaKnown RBP18.69■□□□□ 0.58
IRF1-204ENST00000439555 UHRF1BP1Q6BDS2 1440 aa18.69■□□□□ 0.58
IRF1-204ENST00000439555 EFCAB2Q5VUJ9 269 aa18.69■□□□□ 0.58
IRF1-204ENST00000439555 CEBPAP49715 358 aaPredicted RBP18.68■□□□□ 0.58
IRF1-204ENST00000439555 IQSEC2Q5JU85 1478 aa18.68■□□□□ 0.58
IRF1-204ENST00000439555 SPATA31D1Q6ZQQ2 1576 aa18.67■□□□□ 0.58
IRF1-204ENST00000439555 REREQ9P2R6 1566 aa18.66■□□□□ 0.58
IRF1-204ENST00000439555 ZNF518AQ6AHZ1 1483 aa18.65■□□□□ 0.58
IRF1-204ENST00000439555 C3P01024 1663 aa18.64■□□□□ 0.57
IRF1-204ENST00000439555 TROQ12816 1431 aaPredicted RBP18.64■□□□□ 0.57
IRF1-204ENST00000439555 KDM5CP41229 1560 aa18.64■□□□□ 0.57
IRF1-204ENST00000439555 CASKIN1Q8WXD9 1431 aa18.63■□□□□ 0.57
IRF1-204ENST00000439555 LTBP4Q8N2S1 1624 aa18.62■□□□□ 0.57
IRF1-204ENST00000439555 CLIP1P30622 1438 aa18.61■□□□□ 0.57
IRF1-204ENST00000439555 TRAPPC8Q9Y2L5 1435 aa18.58■□□□□ 0.57
IRF1-204ENST00000439555 AGLP35573 1532 aa18.58■□□□□ 0.56
IRF1-204ENST00000439555 CCDC18Q5T9S5 1454 aa18.58■□□□□ 0.56
IRF1-204ENST00000439555 DIP2CQ9Y2E4 1556 aa18.57■□□□□ 0.56
IRF1-204ENST00000439555 AFAP1Q8N556 730 aa18.57■□□□□ 0.56
IRF1-204ENST00000439555 MLH3Q9UHC1 1453 aa18.57■□□□□ 0.56
IRF1-204ENST00000439555 CDC42BPBQ9Y5S2 1711 aa18.54■□□□□ 0.56
IRF1-204ENST00000439555 KIF14Q15058 1648 aa18.54■□□□□ 0.56
IRF1-204ENST00000439555 FYCO1Q9BQS8 1478 aa18.53■□□□□ 0.56
IRF1-204ENST00000439555 ESF1Q9H501 851 aaKnown RBP18.53■□□□□ 0.56
IRF1-204ENST00000439555 ABCA6Q8N139 1617 aa18.52■□□□□ 0.56
IRF1-204ENST00000439555 NCOA1Q15788 1441 aa18.52■□□□□ 0.56
IRF1-204ENST00000439555 CNTLNQ9NXG0 1405 aa18.52■□□□□ 0.56
IRF1-204ENST00000439555 ARHGAP5Q13017 1502 aa18.52■□□□□ 0.56
IRF1-204ENST00000439555 MROH2AA6NES4 1674 aa18.51■□□□□ 0.55
IRF1-204ENST00000439555 MYT1LQ9UL68 1186 aa18.49■□□□□ 0.55
IRF1-204ENST00000439555 NPATQ14207 1427 aa18.48■□□□□ 0.55
IRF1-204ENST00000439555 KIDINS220Q9ULH0 1771 aa18.47■□□□□ 0.55
IRF1-204ENST00000439555 ITSN2Q9NZM3 1697 aa18.46■□□□□ 0.55
IRF1-204ENST00000439555 LRRIQ1Q96JM4 1722 aa18.46■□□□□ 0.55
IRF1-204ENST00000439555 CAMSAP1Q5T5Y3 1602 aa18.45■□□□□ 0.54
IRF1-204ENST00000439555 PREX2Q70Z35 1606 aa18.45■□□□□ 0.54
IRF1-204ENST00000439555 SUPT6HQ7KZ85 1726 aaKnown RBP18.43■□□□□ 0.54
IRF1-204ENST00000439555 ABCC1P33527 1531 aa18.43■□□□□ 0.54
IRF1-204ENST00000439555 PKD2Q13563 968 aa18.41■□□□□ 0.54
IRF1-204ENST00000439555 ZNF142P52746 1687 aaPredicted RBP18.41■□□□□ 0.54
IRF1-204ENST00000439555 ZMYM3Q14202 1370 aa18.4■□□□□ 0.54
IRF1-204ENST00000439555 PLA2R1Q13018 1463 aa18.39■□□□□ 0.54
IRF1-204ENST00000439555 UBAP1LF5GYI3 381 aa18.39■□□□□ 0.53
IRF1-204ENST00000439555 CDC42BPAQ5VT25 1732 aa18.39■□□□□ 0.53
IRF1-204ENST00000439555 CEP162Q5TB80 1403 aa18.39■□□□□ 0.53
IRF1-204ENST00000439555 MTUS2Q5JR59 1369 aa18.37■□□□□ 0.53
IRF1-204ENST00000439555 GPATCH8Q9UKJ3 1502 aaKnown RBP18.37■□□□□ 0.53
IRF1-204ENST00000439555 ZNF335Q9H4Z2 1342 aaPredicted RBP18.35■□□□□ 0.53
IRF1-204ENST00000439555 NCKAP5LQ9HCH0 1330 aa18.35■□□□□ 0.53
IRF1-204ENST00000439555 TCOF1Q13428 1488 aaKnown RBP18.34■□□□□ 0.53
IRF1-204ENST00000439555 CFDP1Q9UEE9 299 aaPredicted RBP18.34■□□□□ 0.53
IRF1-204ENST00000439555 CLTCQ00610 1675 aaKnown RBP18.34■□□□□ 0.53
IRF1-204ENST00000439555 SAMD9LQ8IVG5 1584 aa18.34■□□□□ 0.53
IRF1-204ENST00000439555 KIAA1107Q9UPP5 1409 aa18.33■□□□□ 0.53
IRF1-204ENST00000439555 CCNB3Q8WWL7 1395 aa18.33■□□□□ 0.53
IRF1-204ENST00000439555 PPP6R1Q9UPN7 881 aa18.33■□□□□ 0.52
IRF1-204ENST00000439555 MYO3AQ8NEV4 1616 aa18.33■□□□□ 0.52
IRF1-204ENST00000439555 ZNF777Q9ULD5 760 aaPredicted RBP18.32■□□□□ 0.52
IRF1-204ENST00000439555 CEP170BQ9Y4F5 1589 aaPredicted RBP18.31■□□□□ 0.52
IRF1-204ENST00000439555 PLEKHH2Q8IVE3 1493 aa18.31■□□□□ 0.52
IRF1-204ENST00000439555 PTPRKQ15262 1439 aa18.29■□□□□ 0.52
IRF1-204ENST00000439555 LOC105371045A0A1W2PR82 267 aa18.28■□□□□ 0.52
IRF1-204ENST00000439555 HNRNPMP52272 730 aaKnown RBP eCLIP18.28■□□□□ 0.52
IRF1-204ENST00000439555 PLXNC1O60486 1568 aa18.28■□□□□ 0.52
IRF1-204ENST00000439555 SPAG9O60271 1321 aaKnown RBP18.27■□□□□ 0.52
IRF1-204ENST00000439555 EHBP1L1Q8N3D4 1523 aa18.26■□□□□ 0.51
IRF1-204ENST00000439555 MED1Q15648 1581 aaPredicted RBP18.25■□□□□ 0.51
IRF1-204ENST00000439555 TOM1O60784 492 aa18.25■□□□□ 0.51
IRF1-204ENST00000439555 POLR1AO95602 1720 aaPredicted RBP18.25■□□□□ 0.51
IRF1-204ENST00000439555 ADGBQ8N7X0 1667 aa18.25■□□□□ 0.51
IRF1-204ENST00000439555 CPS1P31327 1500 aa18.24■□□□□ 0.51
IRF1-204ENST00000439555 ATP7AQ04656 1500 aa18.24■□□□□ 0.51
IRF1-204ENST00000439555 DNMT1P26358 1616 aaKnown RBP18.24■□□□□ 0.51
IRF1-204ENST00000439555 INO80Q9ULG1 1556 aaPredicted RBP18.23■□□□□ 0.51
IRF1-204ENST00000439555 A2MP01023 1474 aa18.23■□□□□ 0.51
IRF1-204ENST00000439555 SYCP2Q9BX26 1530 aa18.23■□□□□ 0.51
IRF1-204ENST00000439555 A2ML1A8K2U0 1454 aa18.22■□□□□ 0.51
IRF1-204ENST00000439555 HSPA1LP34931 641 aa18.22■□□□□ 0.51
IRF1-204ENST00000439555 VPS8Q8N3P4 1428 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms