RNA–Protein interactions for RNA: ENST00000439445.5

CCDC66-207, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 709 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-207ENST00000439445 EHMT2Q96KQ7 1210 aa16.35■□□□□ 0.21
CCDC66-207ENST00000439445 FRMPD1Q5SYB0 1578 aa16.34■□□□□ 0.21
CCDC66-207ENST00000439445 DENND4BO75064 1496 aaPredicted RBP16.34■□□□□ 0.21
CCDC66-207ENST00000439445 AKNAQ7Z591 1439 aa16.33■□□□□ 0.2
CCDC66-207ENST00000439445 EFCAB5A4FU69 1503 aa16.33■□□□□ 0.2
CCDC66-207ENST00000439445 FANCAO15360 1455 aa16.32■□□□□ 0.2
CCDC66-207ENST00000439445 UBTFP17480 764 aaKnown RBP16.32■□□□□ 0.2
CCDC66-207ENST00000439445 APLP2Q06481 763 aa16.32■□□□□ 0.2
CCDC66-207ENST00000439445 SPINK5Q9NQ38 1064 aaPredicted RBP16.32■□□□□ 0.2
CCDC66-207ENST00000439445 ATP1B4Q9UN42 357 aaPredicted RBP16.32■□□□□ 0.2
CCDC66-207ENST00000439445 BCORL1Q5H9F3 1711 aa16.31■□□□□ 0.2
CCDC66-207ENST00000439445 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.31■□□□□ 0.2
CCDC66-207ENST00000439445 CAPN15O75808 1086 aa16.31■□□□□ 0.2
CCDC66-207ENST00000439445 CFAP74Q9C0B2 1584 aa16.29■□□□□ 0.2
CCDC66-207ENST00000439445 RICTORQ6R327 1708 aa16.28■□□□□ 0.2
CCDC66-207ENST00000439445 MADDQ8WXG6 1647 aa16.28■□□□□ 0.2
CCDC66-207ENST00000439445 MYCNP04198 464 aaPredicted RBP16.28■□□□□ 0.2
CCDC66-207ENST00000439445 CDK13Q14004 1512 aaKnown RBP16.28■□□□□ 0.2
CCDC66-207ENST00000439445 TTC37Q6PGP7 1564 aa16.27■□□□□ 0.2
CCDC66-207ENST00000439445 SAMD1Q6SPF0 538 aaPredicted RBP16.27■□□□□ 0.2
CCDC66-207ENST00000439445 ARHGEF40Q8TER5 1519 aa16.26■□□□□ 0.19
CCDC66-207ENST00000439445 FOXD4L1Q9NU39 408 aa16.26■□□□□ 0.19
CCDC66-207ENST00000439445 PLCH2O75038 1416 aa16.23■□□□□ 0.19
CCDC66-207ENST00000439445 POGZQ7Z3K3 1410 aa16.23■□□□□ 0.19
CCDC66-207ENST00000439445 CDK11AQ9UQ88 783 aaPredicted RBP16.23■□□□□ 0.19
CCDC66-207ENST00000439445 RIMS1Q86UR5 1692 aaKnown RBP16.23■□□□□ 0.19
CCDC66-207ENST00000439445 FMN1Q68DA7 1419 aa16.22■□□□□ 0.19
CCDC66-207ENST00000439445 SCAPERQ9BY12 1400 aa16.22■□□□□ 0.19
CCDC66-207ENST00000439445 YEATS2Q9ULM3 1422 aa16.22■□□□□ 0.19
CCDC66-207ENST00000439445 MLECQ14165 292 aa16.22■□□□□ 0.19
CCDC66-207ENST00000439445 EFCAB2Q5VUJ9 269 aa16.22■□□□□ 0.19
CCDC66-207ENST00000439445 FBXO41Q8TF61 875 aa16.22■□□□□ 0.19
CCDC66-207ENST00000439445 ZMYM4Q5VZL5 1548 aa16.22■□□□□ 0.19
CCDC66-207ENST00000439445 ZFYVE16Q7Z3T8 1539 aa16.22■□□□□ 0.19
CCDC66-207ENST00000439445 MAGI2Q86UL8 1455 aa16.21■□□□□ 0.19
CCDC66-207ENST00000439445 PCF11O94913 1555 aaKnown RBP16.21■□□□□ 0.18
CCDC66-207ENST00000439445 HECW1Q76N89 1606 aa16.19■□□□□ 0.18
CCDC66-207ENST00000439445 LMTK3Q96Q04 1460 aa16.19■□□□□ 0.18
CCDC66-207ENST00000439445 ARHGAP35Q9NRY4 1499 aa16.19■□□□□ 0.18
CCDC66-207ENST00000439445 HSPA2P54652 639 aa16.18■□□□□ 0.18
CCDC66-207ENST00000439445 SIGLEC1Q9BZZ2 1709 aa16.16■□□□□ 0.18
CCDC66-207ENST00000439445 MYO5CQ9NQX4 1742 aa16.16■□□□□ 0.18
CCDC66-207ENST00000439445 ATP10AO60312 1499 aa16.14■□□□□ 0.17
CCDC66-207ENST00000439445 TROQ12816 1431 aaPredicted RBP16.13■□□□□ 0.17
CCDC66-207ENST00000439445 KIF14Q15058 1648 aa16.13■□□□□ 0.17
CCDC66-207ENST00000439445 ZNF219Q9P2Y4 722 aaPredicted RBP16.13■□□□□ 0.17
CCDC66-207ENST00000439445 MYT1LQ9UL68 1186 aa16.13■□□□□ 0.17
CCDC66-207ENST00000439445 DSG3P32926 999 aa16.12■□□□□ 0.17
CCDC66-207ENST00000439445 AFAP1Q8N556 730 aa16.12■□□□□ 0.17
CCDC66-207ENST00000439445 CLIP1P30622 1438 aa16.11■□□□□ 0.17
CCDC66-207ENST00000439445 FER1L4A9Z1Z3 1794 aa16.11■□□□□ 0.17
CCDC66-207ENST00000439445 ARHGAP5Q13017 1502 aa16.11■□□□□ 0.17
CCDC66-207ENST00000439445 C9orf84Q5VXU9 1444 aa16.11■□□□□ 0.17
CCDC66-207ENST00000439445 ZNF518AQ6AHZ1 1483 aa16.09■□□□□ 0.17
CCDC66-207ENST00000439445 CEBPAP49715 358 aaPredicted RBP16.08■□□□□ 0.16
CCDC66-207ENST00000439445 LRRIQ1Q96JM4 1722 aa16.08■□□□□ 0.16
CCDC66-207ENST00000439445 ZBTB22O15209 634 aa16.07■□□□□ 0.16
CCDC66-207ENST00000439445 ARHGEF12Q9NZN5 1544 aa16.06■□□□□ 0.16
CCDC66-207ENST00000439445 CDC42BPBQ9Y5S2 1711 aa16.04■□□□□ 0.16
CCDC66-207ENST00000439445 CASKIN1Q8WXD9 1431 aa16.03■□□□□ 0.16
CCDC66-207ENST00000439445 KDM5CP41229 1560 aa16.03■□□□□ 0.16
CCDC66-207ENST00000439445 CCDC18Q5T9S5 1454 aa16.02■□□□□ 0.15
CCDC66-207ENST00000439445 CERKQ8TCT0 537 aa16.01■□□□□ 0.15
CCDC66-207ENST00000439445 PREX1Q8TCU6 1659 aa16■□□□□ 0.15
CCDC66-207ENST00000439445 MLH3Q9UHC1 1453 aa16■□□□□ 0.15
CCDC66-207ENST00000439445 ESF1Q9H501 851 aaKnown RBP16■□□□□ 0.15
CCDC66-207ENST00000439445 TRAPPC8Q9Y2L5 1435 aa16■□□□□ 0.15
CCDC66-207ENST00000439445 DIP2CQ9Y2E4 1556 aa16■□□□□ 0.15
CCDC66-207ENST00000439445 SETD1BQ9UPS6 1966 aaKnown RBP15.99■□□□□ 0.15
CCDC66-207ENST00000439445 PREX2Q70Z35 1606 aa15.99■□□□□ 0.15
CCDC66-207ENST00000439445 ZNF777Q9ULD5 760 aaPredicted RBP15.99■□□□□ 0.15
CCDC66-207ENST00000439445 ABCA6Q8N139 1617 aa15.97■□□□□ 0.15
CCDC66-207ENST00000439445 UHRF1BP1Q6BDS2 1440 aa15.96■□□□□ 0.15
CCDC66-207ENST00000439445 ABCC1P33527 1531 aa15.96■□□□□ 0.15
CCDC66-207ENST00000439445 REREQ9P2R6 1566 aa15.96■□□□□ 0.14
CCDC66-207ENST00000439445 CDC42BPAQ5VT25 1732 aa15.95■□□□□ 0.14
CCDC66-207ENST00000439445 ABCB7O75027 752 aa15.95■□□□□ 0.14
CCDC66-207ENST00000439445 FYCO1Q9BQS8 1478 aa15.95■□□□□ 0.14
CCDC66-207ENST00000439445 ITSN2Q9NZM3 1697 aa15.95■□□□□ 0.14
CCDC66-207ENST00000439445 AGLP35573 1532 aa15.94■□□□□ 0.14
CCDC66-207ENST00000439445 KIDINS220Q9ULH0 1771 aa15.92■□□□□ 0.14
CCDC66-207ENST00000439445 HNRNPMP52272 730 aaKnown RBP eCLIP15.92■□□□□ 0.14
CCDC66-207ENST00000439445 C3P01024 1663 aa15.92■□□□□ 0.14
CCDC66-207ENST00000439445 STRCQ7RTU9 1775 aa15.91■□□□□ 0.14
CCDC66-207ENST00000439445 SPAG9O60271 1321 aaKnown RBP15.91■□□□□ 0.14
CCDC66-207ENST00000439445 GPATCH8Q9UKJ3 1502 aaKnown RBP15.89■□□□□ 0.13
CCDC66-207ENST00000439445 CFDP1Q9UEE9 299 aaPredicted RBP15.89■□□□□ 0.13
CCDC66-207ENST00000439445 SAMD9LQ8IVG5 1584 aa15.88■□□□□ 0.13
CCDC66-207ENST00000439445 CNTLNQ9NXG0 1405 aa15.87■□□□□ 0.13
CCDC66-207ENST00000439445 SYCP2Q9BX26 1530 aa15.87■□□□□ 0.13
CCDC66-207ENST00000439445 CCNB3Q8WWL7 1395 aa15.87■□□□□ 0.13
CCDC66-207ENST00000439445 MTUS2Q5JR59 1369 aa15.86■□□□□ 0.13
CCDC66-207ENST00000439445 SUPT6HQ7KZ85 1726 aaKnown RBP15.84■□□□□ 0.13
CCDC66-207ENST00000439445 ZMYM3Q14202 1370 aa15.84■□□□□ 0.13
CCDC66-207ENST00000439445 PTPRTO14522 1441 aa15.84■□□□□ 0.13
CCDC66-207ENST00000439445 KIAA1107Q9UPP5 1409 aa15.84■□□□□ 0.13
CCDC66-207ENST00000439445 PLEKHH2Q8IVE3 1493 aa15.84■□□□□ 0.13
CCDC66-207ENST00000439445 GGT6Q6P531 493 aa15.82■□□□□ 0.12
CCDC66-207ENST00000439445 ATP7AQ04656 1500 aa15.82■□□□□ 0.12
CCDC66-207ENST00000439445 MROH2AA6NES4 1674 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms