RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 RGS3P49796 1198 aa19.28■□□□□ 0.68
TSC2-206ENST00000439117 CHAF1AQ13111 956 aaPredicted RBP19.27■□□□□ 0.68
TSC2-206ENST00000439117 TMF1P82094 1093 aa19.27■□□□□ 0.68
TSC2-206ENST00000439117 RAB3GAP2Q9H2M9 1393 aa19.26■□□□□ 0.67
TSC2-206ENST00000439117 NUP155O75694 1391 aa19.26■□□□□ 0.67
TSC2-206ENST00000439117 ZRSR1Q15695 479 aaKnown RBP19.25■□□□□ 0.67
TSC2-206ENST00000439117 CCDC18Q5T9S5 1454 aa19.25■□□□□ 0.67
TSC2-206ENST00000439117 MPHOSPH9Q99550 1183 aa19.25■□□□□ 0.67
TSC2-206ENST00000439117 RSPH4AQ5TD94 716 aa19.25■□□□□ 0.67
TSC2-206ENST00000439117 FOXD1Q16676 465 aa19.24■□□□□ 0.67
TSC2-206ENST00000439117 A0A0G2JS52 829 aa19.24■□□□□ 0.67
TSC2-206ENST00000439117 HAP1P54257 671 aaPredicted RBP19.24■□□□□ 0.67
TSC2-206ENST00000439117 CASC1Q6TDU7 716 aa19.24■□□□□ 0.67
TSC2-206ENST00000439117 FGD5Q6ZNL6 1462 aa19.23■□□□□ 0.67
TSC2-206ENST00000439117 NUDCQ9Y266 331 aa19.22■□□□□ 0.67
TSC2-206ENST00000439117 HNRNPMP52272 730 aaKnown RBP eCLIP19.22■□□□□ 0.671e-7■■■■□ 25.8
TSC2-206ENST00000439117 HSP90AB1P08238 724 aaKnown RBP19.21■□□□□ 0.67
TSC2-206ENST00000439117 IGF1RP08069 1367 aa19.2■□□□□ 0.66
TSC2-206ENST00000439117 IPO9Q96P70 1041 aaKnown RBP19.19■□□□□ 0.66
TSC2-206ENST00000439117 GAPVD1Q14C86 1478 aa19.19■□□□□ 0.66
TSC2-206ENST00000439117 RSPH6AQ9H0K4 717 aa19.19■□□□□ 0.66
TSC2-206ENST00000439117 SENP3-EIF4A1A0A087X0R7 540 aa19.18■□□□□ 0.66
TSC2-206ENST00000439117 KIF3BO15066 747 aa19.18■□□□□ 0.66
TSC2-206ENST00000439117 CC2D1BQ5T0F9 858 aaKnown RBP19.18■□□□□ 0.66
TSC2-206ENST00000439117 NRDCO43847 1150 aa19.18■□□□□ 0.66
TSC2-206ENST00000439117 USP35Q9P2H5 1018 aa19.18■□□□□ 0.66
TSC2-206ENST00000439117 PTPRGP23470 1445 aa19.18■□□□□ 0.66
TSC2-206ENST00000439117 SPAG9O60271 1321 aaKnown RBP19.18■□□□□ 0.66
TSC2-206ENST00000439117 TCERG1O14776 1098 aaKnown RBP19.18■□□□□ 0.66
TSC2-206ENST00000439117 LMOD2Q6P5Q4 547 aa19.18■□□□□ 0.66
TSC2-206ENST00000439117 MAPK8IP3Q9UPT6 1336 aa19.18■□□□□ 0.66
TSC2-206ENST00000439117 HSCBQ8IWL3 235 aa19.17■□□□□ 0.66
TSC2-206ENST00000439117 PLCB2Q00722 1185 aa19.16■□□□□ 0.66
TSC2-206ENST00000439117 FTSJ3Q8IY81 847 aaKnown RBP19.16■□□□□ 0.66
TSC2-206ENST00000439117 GOLGA6L6A8MZA4 724 aa19.16■□□□□ 0.66
TSC2-206ENST00000439117 HSPA5P11021 654 aaKnown RBP19.16■□□□□ 0.66
TSC2-206ENST00000439117 RAD54L2Q9Y4B4 1467 aa19.15■□□□□ 0.66
TSC2-206ENST00000439117 NEUROD2Q15784 382 aa19.15■□□□□ 0.66
TSC2-206ENST00000439117 PTMSP20962 102 aa19.15■□□□□ 0.66
TSC2-206ENST00000439117 SRPK2P78362 688 aaKnown RBP19.15■□□□□ 0.66
TSC2-206ENST00000439117 MS4A1P11836 297 aa19.13■□□□□ 0.65
TSC2-206ENST00000439117 SAFB2Q14151 953 aaKnown RBP eCLIP19.12■□□□□ 0.65
TSC2-206ENST00000439117 CHMP4BQ9H444 224 aaKnown RBP19.12■□□□□ 0.65
TSC2-206ENST00000439117 HSP90AA2PQ14568 343 aaPredicted RBP19.11■□□□□ 0.65
TSC2-206ENST00000439117 OSCARQ8IYS5 282 aa19.11■□□□□ 0.65
TSC2-206ENST00000439117 STK26Q9P289 416 aa19.09■□□□□ 0.65
TSC2-206ENST00000439117 U2SURPO15042 1029 aaKnown RBP19.09■□□□□ 0.65
TSC2-206ENST00000439117 GBP4Q96PP9 640 aa19.07■□□□□ 0.64
TSC2-206ENST00000439117 GOLGA6L3A6NEY3 463 aa19.06■□□□□ 0.64
TSC2-206ENST00000439117 ROCK2O75116 1388 aaKnown RBP19.06■□□□□ 0.64
TSC2-206ENST00000439117 WASHC2CQ9Y4E1 1318 aa19.05■□□□□ 0.64
TSC2-206ENST00000439117 KIAA2012Q0VF49 1180 aa19.05■□□□□ 0.64
TSC2-206ENST00000439117 MORC1Q86VD1 984 aa19.05■□□□□ 0.64
TSC2-206ENST00000439117 L3MBTL2Q969R5 705 aa19.04■□□□□ 0.64
TSC2-206ENST00000439117 VSIG10Q8N0Z9 540 aa19.03■□□□□ 0.64
TSC2-206ENST00000439117 CFTRP13569 1480 aa19.03■□□□□ 0.64
TSC2-206ENST00000439117 AQRO60306 1485 aaKnown RBP eCLIP19.03■□□□□ 0.641e-6■■■■■ 28.4
TSC2-206ENST00000439117 CYB5RLQ6IPT4 315 aa19.03■□□□□ 0.64
TSC2-206ENST00000439117 AMER1Q5JTC6 1135 aaPredicted RBP19.02■□□□□ 0.64
TSC2-206ENST00000439117 FANCIQ9NVI1 1328 aa19.02■□□□□ 0.64
TSC2-206ENST00000439117 CFAP44Q96MT7 982 aa19.02■□□□□ 0.64
TSC2-206ENST00000439117 FRAT1Q92837 279 aaPredicted RBP19.02■□□□□ 0.63
TSC2-206ENST00000439117 HDGFL2Q7Z4V5 671 aaPredicted RBP19■□□□□ 0.63
TSC2-206ENST00000439117 TPRNQ4KMQ1 711 aa19■□□□□ 0.63
TSC2-206ENST00000439117 TNNT3P45378 269 aaPredicted RBP18.99■□□□□ 0.63
TSC2-206ENST00000439117 SOX12O15370 315 aa18.97■□□□□ 0.63
TSC2-206ENST00000439117 KTN1Q86UP2 1357 aaKnown RBP18.97■□□□□ 0.63
TSC2-206ENST00000439117 GZF1Q9H116 711 aaPredicted RBP18.96■□□□□ 0.63
TSC2-206ENST00000439117 GOLGA6L4A6NEF3 574 aa18.96■□□□□ 0.63
TSC2-206ENST00000439117 SLKQ9H2G2 1235 aaPredicted RBP18.95■□□□□ 0.62
TSC2-206ENST00000439117 EIF3AQ14152 1382 aaKnown RBP18.95■□□□□ 0.62
TSC2-206ENST00000439117 GSE1Q14687 1217 aa18.94■□□□□ 0.62
TSC2-206ENST00000439117 GRIN2BQ13224 1484 aa18.93■□□□□ 0.62
TSC2-206ENST00000439117 SPRYD3Q8NCJ5 442 aa18.93■□□□□ 0.62
TSC2-206ENST00000439117 RCAN3Q9UKA8 241 aa18.92■□□□□ 0.62
TSC2-206ENST00000439117 NESP48681 1621 aa18.92■□□□□ 0.62
TSC2-206ENST00000439117 HMGXB3Q12766 1538 aa18.91■□□□□ 0.62
TSC2-206ENST00000439117 EID1Q9Y6B2 187 aa18.91■□□□□ 0.62
TSC2-206ENST00000439117 DRC7Q8IY82 874 aa18.91■□□□□ 0.62
TSC2-206ENST00000439117 CC2D2AQ9P2K1 1620 aa18.9■□□□□ 0.62
TSC2-206ENST00000439117 RALBP1Q15311 655 aa18.9■□□□□ 0.62
TSC2-206ENST00000439117 ARID3AQ99856 593 aa18.9■□□□□ 0.62
TSC2-206ENST00000439117 CCDC144AA2RUR9 1427 aa18.89■□□□□ 0.61
TSC2-206ENST00000439117 DHX57Q6P158 1386 aaKnown RBP18.89■□□□□ 0.61
TSC2-206ENST00000439117 SYAP1Q96A49 352 aaPredicted RBP18.89■□□□□ 0.61
TSC2-206ENST00000439117 NUTM2DQ5VT03 806 aaPredicted RBP18.88■□□□□ 0.61
TSC2-206ENST00000439117 MYOM3Q5VTT5 1437 aa18.87■□□□□ 0.61
TSC2-206ENST00000439117 MCCP23508 829 aa18.87■□□□□ 0.61
TSC2-206ENST00000439117 MRC2Q9UBG0 1479 aa18.86■□□□□ 0.61
TSC2-206ENST00000439117 TERF2IPQ9NYB0 399 aa18.84■□□□□ 0.61
TSC2-206ENST00000439117 PAK3O75914 559 aaPredicted RBP18.84■□□□□ 0.61
TSC2-206ENST00000439117 KIF21BO75037 1637 aa18.84■□□□□ 0.61
TSC2-206ENST00000439117 SYNJ1O43426 1573 aa18.83■□□□□ 0.61
TSC2-206ENST00000439117 U2AF1L5P0DN76 240 aaPredicted RBP18.82■□□□□ 0.6
TSC2-206ENST00000439117 U2AF1Q01081 240 aaKnown RBP eCLIP18.82■□□□□ 0.6
TSC2-206ENST00000439117 FGD6Q6ZV73 1430 aa18.82■□□□□ 0.6
TSC2-206ENST00000439117 CALD1Q05682 793 aaKnown RBP18.81■□□□□ 0.6
TSC2-206ENST00000439117 RTF1Q92541 710 aaKnown RBP18.81■□□□□ 0.6
TSC2-206ENST00000439117 IFT140Q96RY7 1462 aa18.81■□□□□ 0.6
TSC2-206ENST00000439117 CASKIN1Q8WXD9 1431 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms