RNA–Protein interactions for RNA: ENST00000439009.1

LINC00578-201, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-201ENST00000439009 SIGLEC1Q9BZZ2 1709 aa13.22□□□□□ -0.29
LINC00578-201ENST00000439009 MLECQ14165 292 aa13.21□□□□□ -0.29
LINC00578-201ENST00000439009 ARHGEF12Q9NZN5 1544 aa13.21□□□□□ -0.29
LINC00578-201ENST00000439009 CDK13Q14004 1512 aaKnown RBP13.2□□□□□ -0.3
LINC00578-201ENST00000439009 C9orf84Q5VXU9 1444 aa13.2□□□□□ -0.3
LINC00578-201ENST00000439009 CDK11AQ9UQ88 783 aaPredicted RBP13.19□□□□□ -0.3
LINC00578-201ENST00000439009 PLPPR3Q6T4P5 718 aa13.18□□□□□ -0.3
LINC00578-201ENST00000439009 FMN1Q68DA7 1419 aa13.18□□□□□ -0.3
LINC00578-201ENST00000439009 DMRT2Q9Y5R5 561 aa13.17□□□□□ -0.3
LINC00578-201ENST00000439009 CEBPAP49715 358 aaPredicted RBP13.16□□□□□ -0.3
LINC00578-201ENST00000439009 AFAP1Q8N556 730 aa13.15□□□□□ -0.3
LINC00578-201ENST00000439009 ZNF518AQ6AHZ1 1483 aa13.15□□□□□ -0.3
LINC00578-201ENST00000439009 TROQ12816 1431 aaPredicted RBP13.14□□□□□ -0.31
LINC00578-201ENST00000439009 ARHGAP35Q9NRY4 1499 aa13.14□□□□□ -0.31
LINC00578-201ENST00000439009 KDM5CP41229 1560 aa13.12□□□□□ -0.31
LINC00578-201ENST00000439009 UBTFP17480 764 aaKnown RBP13.12□□□□□ -0.31
LINC00578-201ENST00000439009 ATP1B4Q9UN42 357 aaPredicted RBP13.12□□□□□ -0.31
LINC00578-201ENST00000439009 FER1L4A9Z1Z3 1794 aa13.12□□□□□ -0.31
LINC00578-201ENST00000439009 MLH3Q9UHC1 1453 aa13.11□□□□□ -0.31
LINC00578-201ENST00000439009 REREQ9P2R6 1566 aa13.11□□□□□ -0.31
LINC00578-201ENST00000439009 UHRF1BP1Q6BDS2 1440 aa13.1□□□□□ -0.31
LINC00578-201ENST00000439009 PTPRTO14522 1441 aa13.09□□□□□ -0.31
LINC00578-201ENST00000439009 CLIP1P30622 1438 aa13.09□□□□□ -0.31
LINC00578-201ENST00000439009 PREX1Q8TCU6 1659 aa13.08□□□□□ -0.31
LINC00578-201ENST00000439009 AGLP35573 1532 aa13.08□□□□□ -0.31
LINC00578-201ENST00000439009 KIF14Q15058 1648 aa13.08□□□□□ -0.32
LINC00578-201ENST00000439009 ARHGAP5Q13017 1502 aa13.08□□□□□ -0.32
LINC00578-201ENST00000439009 MYO5CQ9NQX4 1742 aa13.08□□□□□ -0.32
LINC00578-201ENST00000439009 SETD1BQ9UPS6 1966 aaKnown RBP13.07□□□□□ -0.32
LINC00578-201ENST00000439009 DIP2CQ9Y2E4 1556 aa13.07□□□□□ -0.32
LINC00578-201ENST00000439009 TRAPPC8Q9Y2L5 1435 aa13.06□□□□□ -0.32
LINC00578-201ENST00000439009 STRCQ7RTU9 1775 aa13.06□□□□□ -0.32
LINC00578-201ENST00000439009 MYT1LQ9UL68 1186 aa13.04□□□□□ -0.32
LINC00578-201ENST00000439009 CNTLNQ9NXG0 1405 aa13.04□□□□□ -0.32
LINC00578-201ENST00000439009 ILDR2Q71H61 639 aa13.03□□□□□ -0.32
LINC00578-201ENST00000439009 CASKIN1Q8WXD9 1431 aa13.03□□□□□ -0.32
LINC00578-201ENST00000439009 EHMT2Q96KQ7 1210 aa13.02□□□□□ -0.33
LINC00578-201ENST00000439009 ESF1Q9H501 851 aaKnown RBP13.02□□□□□ -0.33
LINC00578-201ENST00000439009 SOCS7O14512 581 aa13.01□□□□□ -0.33
LINC00578-201ENST00000439009 DISP3Q9P2K9 1392 aa13.01□□□□□ -0.33
LINC00578-201ENST00000439009 NCOA1Q15788 1441 aa13.01□□□□□ -0.33
LINC00578-201ENST00000439009 ABCC1P33527 1531 aa13.01□□□□□ -0.33
LINC00578-201ENST00000439009 ABCA6Q8N139 1617 aa13.01□□□□□ -0.33
LINC00578-201ENST00000439009 LTBP4Q8N2S1 1624 aa13□□□□□ -0.33
LINC00578-201ENST00000439009 IQSEC2Q5JU85 1478 aa13□□□□□ -0.33
LINC00578-201ENST00000439009 CCDC18Q5T9S5 1454 aa13□□□□□ -0.33
LINC00578-201ENST00000439009 NPATQ14207 1427 aa13□□□□□ -0.33
LINC00578-201ENST00000439009 CHIC1Q5VXU3 224 aa13□□□□□ -0.33
LINC00578-201ENST00000439009 CDC42BPBQ9Y5S2 1711 aa12.99□□□□□ -0.33
LINC00578-201ENST00000439009 C3P01024 1663 aa12.98□□□□□ -0.33
LINC00578-201ENST00000439009 PREX2Q70Z35 1606 aa12.98□□□□□ -0.33
LINC00578-201ENST00000439009 ZMYM3Q14202 1370 aa12.97□□□□□ -0.33
LINC00578-201ENST00000439009 LRRIQ1Q96JM4 1722 aa12.96□□□□□ -0.33
LINC00578-201ENST00000439009 KIDINS220Q9ULH0 1771 aa12.96□□□□□ -0.34
LINC00578-201ENST00000439009 KIAA1107Q9UPP5 1409 aa12.96□□□□□ -0.34
LINC00578-201ENST00000439009 SAMD9LQ8IVG5 1584 aa12.95□□□□□ -0.34
LINC00578-201ENST00000439009 SPAG9O60271 1321 aaKnown RBP12.95□□□□□ -0.34
LINC00578-201ENST00000439009 GPATCH8Q9UKJ3 1502 aaKnown RBP12.95□□□□□ -0.34
LINC00578-201ENST00000439009 PPP6R1Q9UPN7 881 aa12.95□□□□□ -0.34
LINC00578-201ENST00000439009 ITSN2Q9NZM3 1697 aa12.94□□□□□ -0.34
LINC00578-201ENST00000439009 HNRNPMP52272 730 aaKnown RBP eCLIP12.93□□□□□ -0.34
LINC00578-201ENST00000439009 PKD2Q13563 968 aa12.93□□□□□ -0.34
LINC00578-201ENST00000439009 FYCO1Q9BQS8 1478 aa12.92□□□□□ -0.34
LINC00578-201ENST00000439009 ZNF777Q9ULD5 760 aaPredicted RBP12.92□□□□□ -0.34
LINC00578-201ENST00000439009 NCKAP5LQ9HCH0 1330 aa12.91□□□□□ -0.34
LINC00578-201ENST00000439009 CAMSAP1Q5T5Y3 1602 aa12.91□□□□□ -0.34
LINC00578-201ENST00000439009 PLA2R1Q13018 1463 aa12.91□□□□□ -0.34
LINC00578-201ENST00000439009 PLEKHH2Q8IVE3 1493 aa12.91□□□□□ -0.34
LINC00578-201ENST00000439009 MROH2AA6NES4 1674 aa12.9□□□□□ -0.34
LINC00578-201ENST00000439009 PTPRKQ15262 1439 aa12.9□□□□□ -0.34
LINC00578-201ENST00000439009 CFDP1Q9UEE9 299 aaPredicted RBP12.9□□□□□ -0.34
LINC00578-201ENST00000439009 CDC42BPAQ5VT25 1732 aa12.9□□□□□ -0.34
LINC00578-201ENST00000439009 ZNF335Q9H4Z2 1342 aaPredicted RBP12.89□□□□□ -0.35
LINC00578-201ENST00000439009 A2MP01023 1474 aa12.89□□□□□ -0.35
LINC00578-201ENST00000439009 TCOF1Q13428 1488 aaKnown RBP12.89□□□□□ -0.35
LINC00578-201ENST00000439009 PLXNC1O60486 1568 aa12.89□□□□□ -0.35
LINC00578-201ENST00000439009 SYCP2Q9BX26 1530 aa12.88□□□□□ -0.35
LINC00578-201ENST00000439009 ATP7AQ04656 1500 aa12.88□□□□□ -0.35
LINC00578-201ENST00000439009 SPATA31D1Q6ZQQ2 1576 aa12.86□□□□□ -0.35
LINC00578-201ENST00000439009 CCNB3Q8WWL7 1395 aa12.86□□□□□ -0.35
LINC00578-201ENST00000439009 UBAP1LF5GYI3 381 aa12.86□□□□□ -0.35
LINC00578-201ENST00000439009 GGT6Q6P531 493 aa12.86□□□□□ -0.35
LINC00578-201ENST00000439009 INO80Q9ULG1 1556 aaPredicted RBP12.86□□□□□ -0.35
LINC00578-201ENST00000439009 RTEL1-TNFRSF6BF6WH68 1400 aa12.85□□□□□ -0.35
LINC00578-201ENST00000439009 MBD5Q9P267 1494 aa12.85□□□□□ -0.35
LINC00578-201ENST00000439009 DHX29Q7Z478 1369 aaKnown RBP12.83□□□□□ -0.36
LINC00578-201ENST00000439009 CEP170BQ9Y4F5 1589 aaPredicted RBP12.83□□□□□ -0.36
LINC00578-201ENST00000439009 ZNF644Q9H582 1327 aaPredicted RBP12.83□□□□□ -0.36
LINC00578-201ENST00000439009 ZNF142P52746 1687 aaPredicted RBP12.83□□□□□ -0.36
LINC00578-201ENST00000439009 A2ML1A8K2U0 1454 aa12.82□□□□□ -0.36
LINC00578-201ENST00000439009 MTUS2Q5JR59 1369 aa12.81□□□□□ -0.36
LINC00578-201ENST00000439009 SUPT6HQ7KZ85 1726 aaKnown RBP12.81□□□□□ -0.36
LINC00578-201ENST00000439009 MYO3AQ8NEV4 1616 aa12.8□□□□□ -0.36
LINC00578-201ENST00000439009 CLTCQ00610 1675 aaKnown RBP12.8□□□□□ -0.36
LINC00578-201ENST00000439009 RSPH4AQ5TD94 716 aa12.79□□□□□ -0.36
LINC00578-201ENST00000439009 FBXO31Q5XUX0 539 aaPredicted RBP12.78□□□□□ -0.36
LINC00578-201ENST00000439009 CEP162Q5TB80 1403 aa12.78□□□□□ -0.36
LINC00578-201ENST00000439009 DNMT1P26358 1616 aaKnown RBP12.77□□□□□ -0.36
LINC00578-201ENST00000439009 TNRQ92752 1358 aa12.77□□□□□ -0.37
LINC00578-201ENST00000439009 FAM135AQ9P2D6 1515 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms