RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 SENP3-EIF4A1A0A087X0R7 540 aa23.03■■□□□ 1.28
TTC3-209ENST00000438055 CCDC184Q52MB2 194 aa23.03■■□□□ 1.28
TTC3-209ENST00000438055 ERCC6Q03468 1493 aa23.02■■□□□ 1.28
TTC3-209ENST00000438055 PKD2Q13563 968 aa23■■□□□ 1.27
TTC3-209ENST00000438055 DAPK1P53355 1430 aa23■■□□□ 1.27
TTC3-209ENST00000438055 PLEKHD1A6NEE1 506 aa22.99■■□□□ 1.27
TTC3-209ENST00000438055 KDM2AQ9Y2K7 1162 aa22.99■■□□□ 1.27
TTC3-209ENST00000438055 TCOF1Q13428 1488 aaKnown RBP22.99■■□□□ 1.27
TTC3-209ENST00000438055 PRG4Q92954 1404 aaPredicted RBP22.99■■□□□ 1.27
TTC3-209ENST00000438055 PRKRIP1Q9H875 184 aaPredicted RBP22.97■■□□□ 1.27
TTC3-209ENST00000438055 ADAMTS12P58397 1594 aa22.97■■□□□ 1.27
TTC3-209ENST00000438055 KDM6BO15054 1643 aa22.96■■□□□ 1.27
TTC3-209ENST00000438055 ABCC5O15440 1437 aa22.96■■□□□ 1.27
TTC3-209ENST00000438055 JPH4Q96JJ6 628 aa22.96■■□□□ 1.27
TTC3-209ENST00000438055 IFT140Q96RY7 1462 aa22.95■■□□□ 1.26
TTC3-209ENST00000438055 KIAA0586Q9BVV6 1533 aa22.95■■□□□ 1.26
TTC3-209ENST00000438055 CCDC7Q96M83 1385 aa22.95■■□□□ 1.26
TTC3-209ENST00000438055 ARHGEF11O15085 1522 aa22.94■■□□□ 1.26
TTC3-209ENST00000438055 WDR62O43379 1518 aa22.94■■□□□ 1.26
TTC3-209ENST00000438055 TSPY4P0CV99 314 aa22.94■■□□□ 1.26
TTC3-209ENST00000438055 TSPY10P0CW01 314 aa22.94■■□□□ 1.26
TTC3-209ENST00000438055 PBRM1Q86U86 1689 aa22.93■■□□□ 1.26
TTC3-209ENST00000438055 RBM19Q9Y4C8 960 aaKnown RBP22.93■■□□□ 1.26
TTC3-209ENST00000438055 ANKRD30BQ9BXX2 1392 aa22.93■■□□□ 1.26
TTC3-209ENST00000438055 CNTLNQ9NXG0 1405 aa22.92■■□□□ 1.26
TTC3-209ENST00000438055 KIF7Q2M1P5 1343 aa22.91■■□□□ 1.26
TTC3-209ENST00000438055 AKNAQ7Z591 1439 aa22.91■■□□□ 1.26
TTC3-209ENST00000438055 DENND4BO75064 1496 aaPredicted RBP22.89■■□□□ 1.26
TTC3-209ENST00000438055 NUP153P49790 1475 aaKnown RBP22.89■■□□□ 1.26
TTC3-209ENST00000438055 PLB1Q6P1J6 1458 aa22.88■■□□□ 1.25
TTC3-209ENST00000438055 ROCK1Q13464 1354 aa22.88■■□□□ 1.25
TTC3-209ENST00000438055 GRIN2AQ12879 1464 aa22.86■■□□□ 1.25
TTC3-209ENST00000438055 CARMIL2Q6F5E8 1435 aa22.86■■□□□ 1.25
TTC3-209ENST00000438055 KDM5BQ9UGL1 1544 aa22.85■■□□□ 1.25
TTC3-209ENST00000438055 NUP155O75694 1391 aa22.85■■□□□ 1.25
TTC3-209ENST00000438055 ANKRD30AQ9BXX3 1397 aa22.85■■□□□ 1.25
TTC3-209ENST00000438055 DISP1Q96F81 1524 aa22.85■■□□□ 1.25
TTC3-209ENST00000438055 TROQ12816 1431 aaPredicted RBP22.85■■□□□ 1.25
TTC3-209ENST00000438055 ANP32EQ9BTT0 268 aa22.84■■□□□ 1.25
TTC3-209ENST00000438055 CARD11Q9BXL7 1154 aa22.84■■□□□ 1.25
TTC3-209ENST00000438055 HNRNPMP52272 730 aaKnown RBP eCLIP22.83■■□□□ 1.253e-7■■■■□ 21.6
TTC3-209ENST00000438055 RPRD2Q5VT52 1461 aaKnown RBP22.83■■□□□ 1.24
TTC3-209ENST00000438055 ERICH6Q7L0X2 663 aa22.82■■□□□ 1.24
TTC3-209ENST00000438055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.82■■□□□ 1.245e-7■■□□□ 14
TTC3-209ENST00000438055 GCC2Q8IWJ2 1684 aa22.81■■□□□ 1.24
TTC3-209ENST00000438055 KIAA0556O60303 1618 aa22.8■■□□□ 1.24
TTC3-209ENST00000438055 B4GALNT3Q6L9W6 998 aa22.8■■□□□ 1.24
TTC3-209ENST00000438055 NCOA1Q15788 1441 aa22.79■■□□□ 1.24
TTC3-209ENST00000438055 DCAF11Q8TEB1 546 aa22.79■■□□□ 1.24
TTC3-209ENST00000438055 RGL3Q3MIN7 710 aa22.79■■□□□ 1.24
TTC3-209ENST00000438055 TMC1Q8TDI8 760 aa22.79■■□□□ 1.24
TTC3-209ENST00000438055 CAMSAP2Q08AD1 1489 aa22.78■■□□□ 1.24
TTC3-209ENST00000438055 USP47Q96K76 1375 aa22.78■■□□□ 1.24
TTC3-209ENST00000438055 RAPGEF6Q8TEU7 1601 aa22.76■■□□□ 1.23
TTC3-209ENST00000438055 ANKRD50Q9ULJ7 1429 aa22.76■■□□□ 1.23
TTC3-209ENST00000438055 PPP4R2Q9NY27 417 aa22.75■■□□□ 1.23
TTC3-209ENST00000438055 SALL2Q9Y467 1007 aaPredicted RBP22.74■■□□□ 1.23
TTC3-209ENST00000438055 GPATCH8Q9UKJ3 1502 aaKnown RBP22.73■■□□□ 1.23
TTC3-209ENST00000438055 KIAA1107Q9UPP5 1409 aa22.72■■□□□ 1.23
TTC3-209ENST00000438055 ZBED9Q6R2W3 1325 aa22.71■■□□□ 1.23
TTC3-209ENST00000438055 DNMT1P26358 1616 aaKnown RBP22.7■■□□□ 1.23
TTC3-209ENST00000438055 TEX14Q8IWB6 1497 aa22.7■■□□□ 1.22
TTC3-209ENST00000438055 ST20-MTHFSA0A0A6YYL1 179 aa22.69■■□□□ 1.22
TTC3-209ENST00000438055 EIF4G3O43432 1585 aaKnown RBP22.68■■□□□ 1.22
TTC3-209ENST00000438055 SYNJ2O15056 1496 aa22.67■■□□□ 1.22
TTC3-209ENST00000438055 PZPP20742 1482 aa22.67■■□□□ 1.22
TTC3-209ENST00000438055 MAGI1Q96QZ7 1491 aaPredicted RBP22.64■■□□□ 1.22
TTC3-209ENST00000438055 KIF15Q9NS87 1388 aa22.63■■□□□ 1.21
TTC3-209ENST00000438055 C9orf84Q5VXU9 1444 aa22.63■■□□□ 1.21
TTC3-209ENST00000438055 PTPRGP23470 1445 aa22.61■■□□□ 1.21
TTC3-209ENST00000438055 KIF14Q15058 1648 aa22.61■■□□□ 1.21
TTC3-209ENST00000438055 SPATA31E1Q6ZUB1 1445 aa22.59■■□□□ 1.21
TTC3-209ENST00000438055 CCDC136Q96JN2 1154 aa22.59■■□□□ 1.21
TTC3-209ENST00000438055 ROCK2O75116 1388 aaKnown RBP22.59■■□□□ 1.21
TTC3-209ENST00000438055 MYT1LQ9UL68 1186 aa22.58■■□□□ 1.21
TTC3-209ENST00000438055 ERICH6BQ5W0A0 696 aa22.58■■□□□ 1.21
TTC3-209ENST00000438055 CEP170Q5SW79 1584 aa22.57■■□□□ 1.2
TTC3-209ENST00000438055 NUDCQ9Y266 331 aa22.54■■□□□ 1.2
TTC3-209ENST00000438055 ATP10BO94823 1461 aa22.54■■□□□ 1.2
TTC3-209ENST00000438055 CC2D1BQ5T0F9 858 aaKnown RBP22.5■■□□□ 1.19
TTC3-209ENST00000438055 ITSN2Q9NZM3 1697 aa22.5■■□□□ 1.19
TTC3-209ENST00000438055 DHX29Q7Z478 1369 aaKnown RBP22.49■■□□□ 1.19
TTC3-209ENST00000438055 NBPF1Q3BBV0 1214 aa22.49■■□□□ 1.19
TTC3-209ENST00000438055 PNISRQ8TF01 805 aaKnown RBP22.48■■□□□ 1.19
TTC3-209ENST00000438055 CCDC144AA2RUR9 1427 aa22.47■■□□□ 1.19
TTC3-209ENST00000438055 NUP160Q12769 1436 aa22.47■■□□□ 1.19
TTC3-209ENST00000438055 ADGRL2O95490 1459 aa22.47■■□□□ 1.19
TTC3-209ENST00000438055 ARID4BQ4LE39 1312 aaPredicted RBP22.46■■□□□ 1.19
TTC3-209ENST00000438055 MSH5O43196 834 aa22.46■■□□□ 1.19
TTC3-209ENST00000438055 MYBBP1AQ9BQG0 1328 aaKnown RBP22.43■■□□□ 1.18
TTC3-209ENST00000438055 RALBP1Q15311 655 aa22.43■■□□□ 1.18
TTC3-209ENST00000438055 RSPH4AQ5TD94 716 aa22.43■■□□□ 1.18
TTC3-209ENST00000438055 KTN1Q86UP2 1357 aaKnown RBP22.39■■□□□ 1.17
TTC3-209ENST00000438055 FANCIQ9NVI1 1328 aa22.38■■□□□ 1.17
TTC3-209ENST00000438055 ADGBQ8N7X0 1667 aa22.37■■□□□ 1.17
TTC3-209ENST00000438055 SMG6Q86US8 1419 aaKnown RBP22.37■■□□□ 1.17
TTC3-209ENST00000438055 ABCC10Q5T3U5 1492 aa22.37■■□□□ 1.17
TTC3-209ENST00000438055 NLRP13Q86W25 1043 aa22.37■■□□□ 1.17
TTC3-209ENST00000438055 RALGAPBQ86X10 1494 aa22.37■■□□□ 1.17
TTC3-209ENST00000438055 MBD5Q9P267 1494 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms