RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 FYCO1Q9BQS8 1478 aa15.5■□□□□ 0.07
PDLIM5-206ENST00000437932 PRKRIP1Q9H875 184 aaPredicted RBP15.49■□□□□ 0.07
PDLIM5-206ENST00000437932 PLPPR3Q6T4P5 718 aa15.49■□□□□ 0.07
PDLIM5-206ENST00000437932 TOPBP1Q92547 1522 aa15.49■□□□□ 0.07
PDLIM5-206ENST00000437932 UACAQ9BZF9 1416 aa15.49■□□□□ 0.07
PDLIM5-206ENST00000437932 ROCK2O75116 1388 aaKnown RBP15.49■□□□□ 0.07
PDLIM5-206ENST00000437932 MAPKBP1O60336 1514 aa15.47■□□□□ 0.07
PDLIM5-206ENST00000437932 NOP58Q9Y2X3 529 aaKnown RBP15.47■□□□□ 0.07
PDLIM5-206ENST00000437932 KNSTRNQ9Y448 316 aa15.45■□□□□ 0.06
PDLIM5-206ENST00000437932 ST20-MTHFSA0A0A6YYL1 179 aa15.45■□□□□ 0.06
PDLIM5-206ENST00000437932 KIF7Q2M1P5 1343 aa15.44■□□□□ 0.06
PDLIM5-206ENST00000437932 CDK13Q14004 1512 aaKnown RBP15.44■□□□□ 0.06
PDLIM5-206ENST00000437932 NBPF8Q3BBV2 869 aa15.44■□□□□ 0.06
PDLIM5-206ENST00000437932 RTN4Q9NQC3 1192 aaKnown RBP15.43■□□□□ 0.06
PDLIM5-206ENST00000437932 RGS3P49796 1198 aa15.43■□□□□ 0.06
PDLIM5-206ENST00000437932 PLIN1O60240 522 aa15.42■□□□□ 0.06
PDLIM5-206ENST00000437932 SLC24A1O60721 1099 aa15.41■□□□□ 0.06
PDLIM5-206ENST00000437932 ANKRD30AQ9BXX3 1397 aa15.41■□□□□ 0.06
PDLIM5-206ENST00000437932 C11orf95C9JLR9 678 aaPredicted RBP15.4■□□□□ 0.06
PDLIM5-206ENST00000437932 USP47Q96K76 1375 aa15.4■□□□□ 0.06
PDLIM5-206ENST00000437932 CCDC7Q96M83 1385 aa15.4■□□□□ 0.06
PDLIM5-206ENST00000437932 NUDCQ9Y266 331 aa15.39■□□□□ 0.05
PDLIM5-206ENST00000437932 JPH4Q96JJ6 628 aa15.38■□□□□ 0.05
PDLIM5-206ENST00000437932 CCDC146Q8IYE0 955 aa15.38■□□□□ 0.05
PDLIM5-206ENST00000437932 DNMBPQ6XZF7 1577 aa15.37■□□□□ 0.05
PDLIM5-206ENST00000437932 CNTLNQ9NXG0 1405 aa15.37■□□□□ 0.05
PDLIM5-206ENST00000437932 PTPRKQ15262 1439 aa15.37■□□□□ 0.05
PDLIM5-206ENST00000437932 DEKP35659 375 aaKnown RBP15.36■□□□□ 0.05
PDLIM5-206ENST00000437932 SAFB2Q14151 953 aaKnown RBP eCLIP15.36■□□□□ 0.05
PDLIM5-206ENST00000437932 FRAT1Q92837 279 aaPredicted RBP15.36■□□□□ 0.05
PDLIM5-206ENST00000437932 RCAN3Q9UKA8 241 aa15.36■□□□□ 0.05
PDLIM5-206ENST00000437932 KTN1Q86UP2 1357 aaKnown RBP15.35■□□□□ 0.05
PDLIM5-206ENST00000437932 NUTM2DQ5VT03 806 aaPredicted RBP15.35■□□□□ 0.05
PDLIM5-206ENST00000437932 STAG3Q9UJ98 1225 aa15.35■□□□□ 0.05
PDLIM5-206ENST00000437932 HFM1A2PYH4 1435 aa15.35■□□□□ 0.05
PDLIM5-206ENST00000437932 TMF1P82094 1093 aa15.35■□□□□ 0.05
PDLIM5-206ENST00000437932 NAIPQ13075 1403 aa15.35■□□□□ 0.05
PDLIM5-206ENST00000437932 EFCAB5A4FU69 1503 aa15.34■□□□□ 0.05
PDLIM5-206ENST00000437932 NEFMP07197 916 aa15.33■□□□□ 0.05
PDLIM5-206ENST00000437932 CARMIL2Q6F5E8 1435 aa15.33■□□□□ 0.05
PDLIM5-206ENST00000437932 EXOC6Q8TAG9 804 aa15.33■□□□□ 0.05
PDLIM5-206ENST00000437932 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.33■□□□□ 0.04
PDLIM5-206ENST00000437932 SUPT6HQ7KZ85 1726 aaKnown RBP15.33■□□□□ 0.04
PDLIM5-206ENST00000437932 EHBP1L1Q8N3D4 1523 aa15.32■□□□□ 0.04
PDLIM5-206ENST00000437932 ZBED9Q6R2W3 1325 aa15.32■□□□□ 0.04
PDLIM5-206ENST00000437932 PRG4Q92954 1404 aaPredicted RBP15.32■□□□□ 0.04
PDLIM5-206ENST00000437932 PTPN23Q9H3S7 1636 aa15.31■□□□□ 0.04
PDLIM5-206ENST00000437932 AKNAQ7Z591 1439 aa15.31■□□□□ 0.04
PDLIM5-206ENST00000437932 PANK3Q9H999 370 aa15.31■□□□□ 0.04
PDLIM5-206ENST00000437932 ABCA10Q8WWZ4 1543 aa15.31■□□□□ 0.04
PDLIM5-206ENST00000437932 PPM1GO15355 546 aaPredicted RBP15.3■□□□□ 0.04
PDLIM5-206ENST00000437932 NPM1P06748 294 aaKnown RBP eCLIP15.28■□□□□ 0.04
PDLIM5-206ENST00000437932 URB2Q14146 1524 aaKnown RBP15.28■□□□□ 0.04
PDLIM5-206ENST00000437932 RALBP1Q15311 655 aa15.26■□□□□ 0.03
PDLIM5-206ENST00000437932 KIF15Q9NS87 1388 aa15.26■□□□□ 0.03
PDLIM5-206ENST00000437932 SLC4A3P48751 1232 aa15.26■□□□□ 0.03
PDLIM5-206ENST00000437932 SPRYD3Q8NCJ5 442 aa15.26■□□□□ 0.03
PDLIM5-206ENST00000437932 MYBBP1AQ9BQG0 1328 aaKnown RBP15.25■□□□□ 0.03
PDLIM5-206ENST00000437932 DAPK1P53355 1430 aa15.25■□□□□ 0.03
PDLIM5-206ENST00000437932 EIF5BO60841 1220 aaKnown RBP15.25■□□□□ 0.03
PDLIM5-206ENST00000437932 EPRSP07814 1512 aaKnown RBP15.25■□□□□ 0.03
PDLIM5-206ENST00000437932 PLEKHG5O94827 1062 aa15.24■□□□□ 0.03
PDLIM5-206ENST00000437932 HECW1Q76N89 1606 aa15.24■□□□□ 0.03
PDLIM5-206ENST00000437932 CDCA7LQ96GN5 454 aa15.23■□□□□ 0.03
PDLIM5-206ENST00000437932 MSH5O43196 834 aa15.23■□□□□ 0.03
PDLIM5-206ENST00000437932 NBPF1Q3BBV0 1214 aa15.23■□□□□ 0.03
PDLIM5-206ENST00000437932 SNAPC4Q5SXM2 1469 aa15.22■□□□□ 0.03
PDLIM5-206ENST00000437932 GGT6Q6P531 493 aa15.22■□□□□ 0.03
PDLIM5-206ENST00000437932 CUL7Q14999 1698 aa15.22■□□□□ 0.03
PDLIM5-206ENST00000437932 CCDC144AA2RUR9 1427 aa15.22■□□□□ 0.03
PDLIM5-206ENST00000437932 RRP1P56182 461 aaKnown RBP15.22■□□□□ 0.03
PDLIM5-206ENST00000437932 CRBNQ96SW2 442 aa15.22■□□□□ 0.03
PDLIM5-206ENST00000437932 STK26Q9P289 416 aa15.22■□□□□ 0.03
PDLIM5-206ENST00000437932 RRP7AQ9Y3A4 280 aaKnown RBP15.21■□□□□ 0.03
PDLIM5-206ENST00000437932 U2SURPO15042 1029 aaKnown RBP15.2■□□□□ 0.02
PDLIM5-206ENST00000437932 GRIN2BQ13224 1484 aa15.2■□□□□ 0.02
PDLIM5-206ENST00000437932 UPF2Q9HAU5 1272 aaKnown RBP15.2■□□□□ 0.02
PDLIM5-206ENST00000437932 ANKRD50Q9ULJ7 1429 aa15.2■□□□□ 0.02
PDLIM5-206ENST00000437932 MAP3K1Q13233 1512 aa15.19■□□□□ 0.02
PDLIM5-206ENST00000437932 SKAP1Q86WV1 359 aa15.19■□□□□ 0.02
PDLIM5-206ENST00000437932 DDRGK1Q96HY6 314 aa15.19■□□□□ 0.02
PDLIM5-206ENST00000437932 IPO9Q96P70 1041 aaKnown RBP15.19■□□□□ 0.02
PDLIM5-206ENST00000437932 KIF3BO15066 747 aa15.18■□□□□ 0.02
PDLIM5-206ENST00000437932 NLRP13Q86W25 1043 aa15.18■□□□□ 0.02
PDLIM5-206ENST00000437932 THOC2Q8NI27 1593 aaKnown RBP15.18■□□□□ 0.02
PDLIM5-206ENST00000437932 ERICH6BQ5W0A0 696 aa15.18■□□□□ 0.02
PDLIM5-206ENST00000437932 CFAP43Q8NDM7 1665 aa15.18■□□□□ 0.02
PDLIM5-206ENST00000437932 CDCA8Q53HL2 280 aa15.18■□□□□ 0.02
PDLIM5-206ENST00000437932 MORC1Q86VD1 984 aa15.16■□□□□ 0.02
PDLIM5-206ENST00000437932 HSP90AA1P07900 732 aaKnown RBP15.16■□□□□ 0.02
PDLIM5-206ENST00000437932 CTTNBP2Q8WZ74 1663 aa15.16■□□□□ 0.02
PDLIM5-206ENST00000437932 IQGAP2Q13576 1575 aa15.16■□□□□ 0.02
PDLIM5-206ENST00000437932 PTPRGP23470 1445 aa15.15■□□□□ 0.02
PDLIM5-206ENST00000437932 ABCC5O15440 1437 aa15.15■□□□□ 0.02
PDLIM5-206ENST00000437932 FTSJ3Q8IY81 847 aaKnown RBP15.15■□□□□ 0.02
PDLIM5-206ENST00000437932 PLB1Q6P1J6 1458 aa15.14■□□□□ 0.01
PDLIM5-206ENST00000437932 PAK3O75914 559 aaPredicted RBP15.14■□□□□ 0.01
PDLIM5-206ENST00000437932 ZNF608Q9ULD9 1512 aaPredicted RBP15.14■□□□□ 0.01
PDLIM5-206ENST00000437932 MRC2Q9UBG0 1479 aa15.14■□□□□ 0.01
PDLIM5-206ENST00000437932 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms