RNA–Protein interactions for RNA: ENST00000437025.6

GABRA1-204, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-204ENST00000437025 C11orf95C9JLR9 678 aaPredicted RBP14.68□□□□□ -0.06
GABRA1-204ENST00000437025 PKD2Q13563 968 aa14.67□□□□□ -0.06
GABRA1-204ENST00000437025 PLEKHD1A6NEE1 506 aa14.66□□□□□ -0.06
GABRA1-204ENST00000437025 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.66□□□□□ -0.06
GABRA1-204ENST00000437025 ABCA5Q8WWZ7 1642 aa14.66□□□□□ -0.06
GABRA1-204ENST00000437025 IQGAP2Q13576 1575 aa14.66□□□□□ -0.06
GABRA1-204ENST00000437025 THOC2Q8NI27 1593 aaKnown RBP14.65□□□□□ -0.06
GABRA1-204ENST00000437025 SALL2Q9Y467 1007 aaPredicted RBP14.64□□□□□ -0.07
GABRA1-204ENST00000437025 PRG4Q92954 1404 aaPredicted RBP14.64□□□□□ -0.07
GABRA1-204ENST00000437025 TSPY4P0CV99 314 aa14.64□□□□□ -0.07
GABRA1-204ENST00000437025 TSPY10P0CW01 314 aa14.64□□□□□ -0.07
GABRA1-204ENST00000437025 JPH4Q96JJ6 628 aa14.64□□□□□ -0.07
GABRA1-204ENST00000437025 UGGT2Q9NYU1 1516 aa14.64□□□□□ -0.07
GABRA1-204ENST00000437025 MRC2Q9UBG0 1479 aa14.63□□□□□ -0.07
GABRA1-204ENST00000437025 SAMD9Q5K651 1589 aa14.63□□□□□ -0.07
GABRA1-204ENST00000437025 RGL3Q3MIN7 710 aa14.62□□□□□ -0.07
GABRA1-204ENST00000437025 PODXL2Q9NZ53 605 aa14.62□□□□□ -0.07
GABRA1-204ENST00000437025 HECW1Q76N89 1606 aa14.62□□□□□ -0.07
GABRA1-204ENST00000437025 PRKRIP1Q9H875 184 aaPredicted RBP14.61□□□□□ -0.07
GABRA1-204ENST00000437025 HNRNPMP52272 730 aaKnown RBP eCLIP14.6□□□□□ -0.07
GABRA1-204ENST00000437025 RBM19Q9Y4C8 960 aaKnown RBP14.6□□□□□ -0.07
GABRA1-204ENST00000437025 DAPK1P53355 1430 aa14.59□□□□□ -0.07
GABRA1-204ENST00000437025 CARD11Q9BXL7 1154 aa14.59□□□□□ -0.07
GABRA1-204ENST00000437025 B4GALNT3Q6L9W6 998 aa14.58□□□□□ -0.08
GABRA1-204ENST00000437025 CCDC7Q96M83 1385 aa14.58□□□□□ -0.08
GABRA1-204ENST00000437025 KIF7Q2M1P5 1343 aa14.58□□□□□ -0.08
GABRA1-204ENST00000437025 KDM6BO15054 1643 aa14.58□□□□□ -0.08
GABRA1-204ENST00000437025 MYT1LQ9UL68 1186 aa14.57□□□□□ -0.08
GABRA1-204ENST00000437025 MIA2Q96PC5 1412 aa14.57□□□□□ -0.08
GABRA1-204ENST00000437025 NUP155O75694 1391 aa14.57□□□□□ -0.08
GABRA1-204ENST00000437025 PLB1Q6P1J6 1458 aa14.57□□□□□ -0.08
GABRA1-204ENST00000437025 ABCC5O15440 1437 aa14.57□□□□□ -0.08
GABRA1-204ENST00000437025 DCAF11Q8TEB1 546 aa14.56□□□□□ -0.08
GABRA1-204ENST00000437025 LRRIQ1Q96JM4 1722 aa14.56□□□□□ -0.08
GABRA1-204ENST00000437025 TMC1Q8TDI8 760 aa14.56□□□□□ -0.08
GABRA1-204ENST00000437025 TARBP1Q13395 1621 aaKnown RBP14.56□□□□□ -0.08
GABRA1-204ENST00000437025 ANKRD30BQ9BXX2 1392 aa14.54□□□□□ -0.08
GABRA1-204ENST00000437025 CNTLNQ9NXG0 1405 aa14.53□□□□□ -0.08
GABRA1-204ENST00000437025 IFT140Q96RY7 1462 aa14.53□□□□□ -0.08
GABRA1-204ENST00000437025 KIAA0586Q9BVV6 1533 aa14.53□□□□□ -0.08
GABRA1-204ENST00000437025 ADAMTS12P58397 1594 aa14.53□□□□□ -0.08
GABRA1-204ENST00000437025 CARMIL2Q6F5E8 1435 aa14.52□□□□□ -0.08
GABRA1-204ENST00000437025 ANKRD30AQ9BXX3 1397 aa14.52□□□□□ -0.08
GABRA1-204ENST00000437025 NUP153P49790 1475 aaKnown RBP14.52□□□□□ -0.09
GABRA1-204ENST00000437025 WDR62O43379 1518 aa14.51□□□□□ -0.09
GABRA1-204ENST00000437025 ANP32EQ9BTT0 268 aa14.51□□□□□ -0.09
GABRA1-204ENST00000437025 TCOF1Q13428 1488 aaKnown RBP14.5□□□□□ -0.09
GABRA1-204ENST00000437025 PBRM1Q86U86 1689 aa14.5□□□□□ -0.09
GABRA1-204ENST00000437025 GRIN2AQ12879 1464 aa14.5□□□□□ -0.09
GABRA1-204ENST00000437025 USP47Q96K76 1375 aa14.5□□□□□ -0.09
GABRA1-204ENST00000437025 TROQ12816 1431 aaPredicted RBP14.49□□□□□ -0.09
GABRA1-204ENST00000437025 DENND4BO75064 1496 aaPredicted RBP14.48□□□□□ -0.09
GABRA1-204ENST00000437025 ST20-MTHFSA0A0A6YYL1 179 aa14.48□□□□□ -0.09
GABRA1-204ENST00000437025 DISP1Q96F81 1524 aa14.47□□□□□ -0.09
GABRA1-204ENST00000437025 ANKRD50Q9ULJ7 1429 aa14.46□□□□□ -0.09
GABRA1-204ENST00000437025 CAMSAP2Q08AD1 1489 aa14.46□□□□□ -0.1
GABRA1-204ENST00000437025 PPP4R2Q9NY27 417 aa14.46□□□□□ -0.1
GABRA1-204ENST00000437025 RPRD2Q5VT52 1461 aaKnown RBP14.45□□□□□ -0.1
GABRA1-204ENST00000437025 ARHGEF11O15085 1522 aa14.45□□□□□ -0.1
GABRA1-204ENST00000437025 ROCK1Q13464 1354 aa14.45□□□□□ -0.1
GABRA1-204ENST00000437025 AKNAQ7Z591 1439 aa14.44□□□□□ -0.1
GABRA1-204ENST00000437025 NCOA1Q15788 1441 aa14.44□□□□□ -0.1
GABRA1-204ENST00000437025 KIAA0556O60303 1618 aa14.43□□□□□ -0.1
GABRA1-204ENST00000437025 CCDC136Q96JN2 1154 aa14.43□□□□□ -0.1
GABRA1-204ENST00000437025 KDM5BQ9UGL1 1544 aa14.42□□□□□ -0.1
GABRA1-204ENST00000437025 CC2D1BQ5T0F9 858 aaKnown RBP14.41□□□□□ -0.1
GABRA1-204ENST00000437025 KIAA1107Q9UPP5 1409 aa14.41□□□□□ -0.1
GABRA1-204ENST00000437025 GPATCH8Q9UKJ3 1502 aaKnown RBP14.41□□□□□ -0.1
GABRA1-204ENST00000437025 KIF15Q9NS87 1388 aa14.41□□□□□ -0.1
GABRA1-204ENST00000437025 RAPGEF6Q8TEU7 1601 aa14.41□□□□□ -0.1
GABRA1-204ENST00000437025 ZBED9Q6R2W3 1325 aa14.4□□□□□ -0.1
GABRA1-204ENST00000437025 ROCK2O75116 1388 aaKnown RBP14.4□□□□□ -0.1
GABRA1-204ENST00000437025 PTPRGP23470 1445 aa14.4□□□□□ -0.1
GABRA1-204ENST00000437025 C9orf84Q5VXU9 1444 aa14.38□□□□□ -0.11
GABRA1-204ENST00000437025 GCC2Q8IWJ2 1684 aa14.38□□□□□ -0.11
GABRA1-204ENST00000437025 EIF4G3O43432 1585 aaKnown RBP14.38□□□□□ -0.11
GABRA1-204ENST00000437025 ANO8Q9HCE9 1232 aaPredicted RBP14.38□□□□□ -0.11
GABRA1-204ENST00000437025 SYNJ2O15056 1496 aa14.36□□□□□ -0.11
GABRA1-204ENST00000437025 PZPP20742 1482 aa14.36□□□□□ -0.11
GABRA1-204ENST00000437025 NBPF1Q3BBV0 1214 aa14.36□□□□□ -0.11
GABRA1-204ENST00000437025 TEX14Q8IWB6 1497 aa14.36□□□□□ -0.11
GABRA1-204ENST00000437025 KIF14Q15058 1648 aa14.35□□□□□ -0.11
GABRA1-204ENST00000437025 DNMT1P26358 1616 aaKnown RBP14.34□□□□□ -0.11
GABRA1-204ENST00000437025 NPM2Q86SE8 214 aaKnown RBP14.33□□□□□ -0.11
GABRA1-204ENST00000437025 NUDCQ9Y266 331 aa14.33□□□□□ -0.11
GABRA1-204ENST00000437025 SENP3Q9H4L4 574 aaPredicted RBP14.33□□□□□ -0.12
GABRA1-204ENST00000437025 MAGI1Q96QZ7 1491 aaPredicted RBP14.32□□□□□ -0.12
GABRA1-204ENST00000437025 ATP10BO94823 1461 aa14.31□□□□□ -0.12
GABRA1-204ENST00000437025 CEP170Q5SW79 1584 aa14.31□□□□□ -0.12
GABRA1-204ENST00000437025 CCDC144AA2RUR9 1427 aa14.3□□□□□ -0.12
GABRA1-204ENST00000437025 MSH5O43196 834 aa14.29□□□□□ -0.12
GABRA1-204ENST00000437025 CHGAP10645 457 aaKnown RBP14.29□□□□□ -0.12
GABRA1-204ENST00000437025 NBR1Q14596 966 aa14.28□□□□□ -0.12
GABRA1-204ENST00000437025 PKNOX2Q96KN3 472 aa14.28□□□□□ -0.12
GABRA1-204ENST00000437025 PNISRQ8TF01 805 aaKnown RBP14.28□□□□□ -0.12
GABRA1-204ENST00000437025 SPATA31E1Q6ZUB1 1445 aa14.27□□□□□ -0.12
GABRA1-204ENST00000437025 PLPPR3Q6T4P5 718 aa14.26□□□□□ -0.13
GABRA1-204ENST00000437025 MYBBP1AQ9BQG0 1328 aaKnown RBP14.26□□□□□ -0.13
GABRA1-204ENST00000437025 PANK3Q9H999 370 aa14.26□□□□□ -0.13
GABRA1-204ENST00000437025 DHX29Q7Z478 1369 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms