RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 ATP1B4Q9UN42 357 aaPredicted RBP24.83■■□□□ 1.57
HDAC8-213ENST00000436675 SCAPERQ9BY12 1400 aa24.83■■□□□ 1.57
HDAC8-213ENST00000436675 MAGI2Q86UL8 1455 aa24.8■■□□□ 1.56
HDAC8-213ENST00000436675 CERKQ8TCT0 537 aa24.78■■□□□ 1.56
HDAC8-213ENST00000436675 PLCH2O75038 1416 aa24.78■■□□□ 1.56
HDAC8-213ENST00000436675 CEBPAP49715 358 aaPredicted RBP24.74■■□□□ 1.55
HDAC8-213ENST00000436675 MYO5CQ9NQX4 1742 aa24.73■■□□□ 1.55
HDAC8-213ENST00000436675 ATP10AO60312 1499 aa24.73■■□□□ 1.55
HDAC8-213ENST00000436675 EFCAB2Q5VUJ9 269 aa24.71■■□□□ 1.55
HDAC8-213ENST00000436675 ARHGEF12Q9NZN5 1544 aa24.71■■□□□ 1.55
HDAC8-213ENST00000436675 C9orf84Q5VXU9 1444 aa24.7■■□□□ 1.55
HDAC8-213ENST00000436675 UBTFP17480 764 aaKnown RBP24.69■■□□□ 1.54
HDAC8-213ENST00000436675 PREX1Q8TCU6 1659 aa24.69■■□□□ 1.54
HDAC8-213ENST00000436675 KIF14Q15058 1648 aa24.68■■□□□ 1.54
HDAC8-213ENST00000436675 MYT1LQ9UL68 1186 aa24.68■■□□□ 1.54
HDAC8-213ENST00000436675 AFAP1Q8N556 730 aa24.64■■□□□ 1.54
HDAC8-213ENST00000436675 CDK11AQ9UQ88 783 aaPredicted RBP24.63■■□□□ 1.53
HDAC8-213ENST00000436675 FMN1Q68DA7 1419 aa24.62■■□□□ 1.53
HDAC8-213ENST00000436675 ARHGAP5Q13017 1502 aa24.62■■□□□ 1.53
HDAC8-213ENST00000436675 STRCQ7RTU9 1775 aa24.6■■□□□ 1.53
HDAC8-213ENST00000436675 ZNF518AQ6AHZ1 1483 aa24.6■■□□□ 1.53
HDAC8-213ENST00000436675 ARHGAP35Q9NRY4 1499 aa24.6■■□□□ 1.53
HDAC8-213ENST00000436675 TROQ12816 1431 aaPredicted RBP24.57■■□□□ 1.52
HDAC8-213ENST00000436675 LRRIQ1Q96JM4 1722 aa24.57■■□□□ 1.52
HDAC8-213ENST00000436675 SETD1BQ9UPS6 1966 aaKnown RBP24.56■■□□□ 1.52
HDAC8-213ENST00000436675 UHRF1BP1Q6BDS2 1440 aa24.56■■□□□ 1.52
HDAC8-213ENST00000436675 KDM5CP41229 1560 aa24.55■■□□□ 1.52
HDAC8-213ENST00000436675 DIP2CQ9Y2E4 1556 aa24.55■■□□□ 1.52
HDAC8-213ENST00000436675 DMRT2Q9Y5R5 561 aa24.54■■□□□ 1.52
HDAC8-213ENST00000436675 CLIP1P30622 1438 aa24.53■■□□□ 1.52
HDAC8-213ENST00000436675 CDC42BPBQ9Y5S2 1711 aa24.53■■□□□ 1.52
HDAC8-213ENST00000436675 ABCA6Q8N139 1617 aa24.52■■□□□ 1.52
HDAC8-213ENST00000436675 C3P01024 1663 aa24.51■■□□□ 1.51
HDAC8-213ENST00000436675 DISP3Q9P2K9 1392 aa24.51■■□□□ 1.51
HDAC8-213ENST00000436675 ESF1Q9H501 851 aaKnown RBP24.49■■□□□ 1.51
HDAC8-213ENST00000436675 TRAPPC8Q9Y2L5 1435 aa24.47■■□□□ 1.51
HDAC8-213ENST00000436675 ILDR2Q71H61 639 aa24.47■■□□□ 1.51
HDAC8-213ENST00000436675 REREQ9P2R6 1566 aa24.46■■□□□ 1.51
HDAC8-213ENST00000436675 MLH3Q9UHC1 1453 aa24.45■■□□□ 1.5
HDAC8-213ENST00000436675 PREX2Q70Z35 1606 aa24.44■■□□□ 1.5
HDAC8-213ENST00000436675 ITSN2Q9NZM3 1697 aa24.43■■□□□ 1.5
HDAC8-213ENST00000436675 ABCC1P33527 1531 aa24.42■■□□□ 1.5
HDAC8-213ENST00000436675 PTPRTO14522 1441 aa24.4■■□□□ 1.5
HDAC8-213ENST00000436675 AGLP35573 1532 aa24.4■■□□□ 1.5
HDAC8-213ENST00000436675 KIDINS220Q9ULH0 1771 aa24.39■■□□□ 1.5
HDAC8-213ENST00000436675 CDC42BPAQ5VT25 1732 aa24.38■■□□□ 1.49
HDAC8-213ENST00000436675 ZNF777Q9ULD5 760 aaPredicted RBP24.37■■□□□ 1.49
HDAC8-213ENST00000436675 CCDC18Q5T9S5 1454 aa24.33■■□□□ 1.49
HDAC8-213ENST00000436675 LTBP4Q8N2S1 1624 aa24.33■■□□□ 1.49
HDAC8-213ENST00000436675 CASKIN1Q8WXD9 1431 aa24.33■■□□□ 1.49
HDAC8-213ENST00000436675 SOCS7O14512 581 aa24.32■■□□□ 1.48
HDAC8-213ENST00000436675 CHIC1Q5VXU3 224 aa24.32■■□□□ 1.48
HDAC8-213ENST00000436675 NCOA1Q15788 1441 aa24.32■■□□□ 1.48
HDAC8-213ENST00000436675 SPATA31D1Q6ZQQ2 1576 aa24.31■■□□□ 1.48
HDAC8-213ENST00000436675 SUPT6HQ7KZ85 1726 aaKnown RBP24.31■■□□□ 1.48
HDAC8-213ENST00000436675 CNTLNQ9NXG0 1405 aa24.31■■□□□ 1.48
HDAC8-213ENST00000436675 SAMD9LQ8IVG5 1584 aa24.3■■□□□ 1.48
HDAC8-213ENST00000436675 CAMSAP1Q5T5Y3 1602 aa24.28■■□□□ 1.48
HDAC8-213ENST00000436675 HNRNPMP52272 730 aaKnown RBP eCLIP24.28■■□□□ 1.48
HDAC8-213ENST00000436675 SYCP2Q9BX26 1530 aa24.26■■□□□ 1.47
HDAC8-213ENST00000436675 SPAG9O60271 1321 aaKnown RBP24.26■■□□□ 1.47
HDAC8-213ENST00000436675 NCKAP5LQ9HCH0 1330 aa24.26■■□□□ 1.47
HDAC8-213ENST00000436675 MROH2AA6NES4 1674 aa24.25■■□□□ 1.47
HDAC8-213ENST00000436675 ZMYM3Q14202 1370 aa24.25■■□□□ 1.47
HDAC8-213ENST00000436675 CLTCQ00610 1675 aaKnown RBP24.24■■□□□ 1.47
HDAC8-213ENST00000436675 NPATQ14207 1427 aa24.22■■□□□ 1.47
HDAC8-213ENST00000436675 GPATCH8Q9UKJ3 1502 aaKnown RBP24.21■■□□□ 1.47
HDAC8-213ENST00000436675 FYCO1Q9BQS8 1478 aa24.2■■□□□ 1.47
HDAC8-213ENST00000436675 ZNF335Q9H4Z2 1342 aaPredicted RBP24.2■■□□□ 1.46
HDAC8-213ENST00000436675 IQSEC2Q5JU85 1478 aa24.19■■□□□ 1.46
HDAC8-213ENST00000436675 ATP7AQ04656 1500 aa24.19■■□□□ 1.46
HDAC8-213ENST00000436675 GGT6Q6P531 493 aa24.18■■□□□ 1.46
HDAC8-213ENST00000436675 MYO3AQ8NEV4 1616 aa24.17■■□□□ 1.46
HDAC8-213ENST00000436675 UBAP1LF5GYI3 381 aa24.16■■□□□ 1.46
HDAC8-213ENST00000436675 CFDP1Q9UEE9 299 aaPredicted RBP24.16■■□□□ 1.46
HDAC8-213ENST00000436675 A2MP01023 1474 aa24.15■■□□□ 1.46
HDAC8-213ENST00000436675 INO80Q9ULG1 1556 aaPredicted RBP24.14■■□□□ 1.45
HDAC8-213ENST00000436675 PLXNC1O60486 1568 aa24.12■■□□□ 1.45
HDAC8-213ENST00000436675 ZNF142P52746 1687 aaPredicted RBP24.12■■□□□ 1.45
HDAC8-213ENST00000436675 PTPRKQ15262 1439 aa24.12■■□□□ 1.45
HDAC8-213ENST00000436675 CCNB3Q8WWL7 1395 aa24.12■■□□□ 1.45
HDAC8-213ENST00000436675 CEP170BQ9Y4F5 1589 aaPredicted RBP24.12■■□□□ 1.45
HDAC8-213ENST00000436675 KIAA1107Q9UPP5 1409 aa24.1■■□□□ 1.45
HDAC8-213ENST00000436675 PLEKHH2Q8IVE3 1493 aa24.1■■□□□ 1.45
HDAC8-213ENST00000436675 PKD2Q13563 968 aa24.09■■□□□ 1.45
HDAC8-213ENST00000436675 PLA2R1Q13018 1463 aa24.07■■□□□ 1.44
HDAC8-213ENST00000436675 ZNF644Q9H582 1327 aaPredicted RBP24.07■■□□□ 1.44
HDAC8-213ENST00000436675 ADGBQ8N7X0 1667 aa24.06■■□□□ 1.44
HDAC8-213ENST00000436675 TCOF1Q13428 1488 aaKnown RBP24.06■■□□□ 1.44
HDAC8-213ENST00000436675 MTUS2Q5JR59 1369 aa24.05■■□□□ 1.44
HDAC8-213ENST00000436675 PPP6R1Q9UPN7 881 aa24.05■■□□□ 1.44
HDAC8-213ENST00000436675 SCAF1Q9H7N4 1312 aaKnown RBP24.02■■□□□ 1.44
HDAC8-213ENST00000436675 DNMT1P26358 1616 aaKnown RBP23.99■■□□□ 1.43
HDAC8-213ENST00000436675 A2ML1A8K2U0 1454 aa23.99■■□□□ 1.43
HDAC8-213ENST00000436675 TIAM1Q13009 1591 aa23.99■■□□□ 1.43
HDAC8-213ENST00000436675 PIP4K2BP78356 416 aa23.97■■□□□ 1.43
HDAC8-213ENST00000436675 FBXO31Q5XUX0 539 aaPredicted RBP23.97■■□□□ 1.43
HDAC8-213ENST00000436675 MBD5Q9P267 1494 aa23.95■■□□□ 1.42
HDAC8-213ENST00000436675 POLR1AO95602 1720 aaPredicted RBP23.95■■□□□ 1.42
HDAC8-213ENST00000436675 KIF3BO15066 747 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms