RNA–Protein interactions for RNA: ENST00000436441.5

SETX-202, Transcript of senataxin, humanhuman

APPRIS ALT2 TSL 5

Gene SETX, Length 5,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETX-202ENST00000436441 RCAN3Q9UKA8 241 aa12.41□□□□□ -0.42
SETX-202ENST00000436441 RB1CC1Q8TDY2 1594 aa12.39□□□□□ -0.43
SETX-202ENST00000436441 GZF1Q9H116 711 aaPredicted RBP12.39□□□□□ -0.43
SETX-202ENST00000436441 SLKQ9H2G2 1235 aaPredicted RBP12.39□□□□□ -0.43
SETX-202ENST00000436441 KIAA2012Q0VF49 1180 aa12.38□□□□□ -0.43
SETX-202ENST00000436441 LMOD2Q6P5Q4 547 aa12.37□□□□□ -0.43
SETX-202ENST00000436441 IPO8O15397 1037 aaKnown RBP12.37□□□□□ -0.43
SETX-202ENST00000436441 IPO9Q96P70 1041 aaKnown RBP12.37□□□□□ -0.43
SETX-202ENST00000436441 RWDD1Q9H446 243 aaPredicted RBP12.37□□□□□ -0.43
SETX-202ENST00000436441 KANK1Q14678 1352 aa12.36□□□□□ -0.43
SETX-202ENST00000436441 ARHGAP35Q9NRY4 1499 aa12.36□□□□□ -0.43
SETX-202ENST00000436441 AMER1Q5JTC6 1135 aaPredicted RBP12.35□□□□□ -0.43
SETX-202ENST00000436441 GOLGA6L3A6NEY3 463 aa12.35□□□□□ -0.43
SETX-202ENST00000436441 SRPK2P78362 688 aaKnown RBP12.35□□□□□ -0.43
SETX-202ENST00000436441 GOLGA2Q08379 1002 aa12.35□□□□□ -0.43
SETX-202ENST00000436441 RALBP1Q15311 655 aa12.35□□□□□ -0.43
SETX-202ENST00000436441 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.35□□□□□ -0.43
SETX-202ENST00000436441 VPS8Q8N3P4 1428 aa12.34□□□□□ -0.43
SETX-202ENST00000436441 APBB1O00213 710 aa12.34□□□□□ -0.43
SETX-202ENST00000436441 ITPRIPQ8IWB1 547 aa12.34□□□□□ -0.43
SETX-202ENST00000436441 KIAA1211Q6ZU35 1233 aa12.33□□□□□ -0.44
SETX-202ENST00000436441 SYAP1Q96A49 352 aaPredicted RBP12.33□□□□□ -0.44
SETX-202ENST00000436441 NPHP1O15259 732 aa12.32□□□□□ -0.44
SETX-202ENST00000436441 ARID3AQ99856 593 aa12.32□□□□□ -0.44
SETX-202ENST00000436441 SOGA1O94964 1423 aa12.32□□□□□ -0.44
SETX-202ENST00000436441 PMFBP1Q8TBY8 1022 aa12.32□□□□□ -0.44
SETX-202ENST00000436441 GNL2Q13823 731 aaKnown RBP12.32□□□□□ -0.44
SETX-202ENST00000436441 RTF1Q92541 710 aaKnown RBP12.32□□□□□ -0.44
SETX-202ENST00000436441 MFAP1P55081 439 aaKnown RBP12.31□□□□□ -0.44
SETX-202ENST00000436441 PKD2Q13563 968 aa12.31□□□□□ -0.44
SETX-202ENST00000436441 EIF4G1Q04637 1599 aaKnown RBP12.3□□□□□ -0.44
SETX-202ENST00000436441 CARMIL1Q5VZK9 1371 aa12.3□□□□□ -0.44
SETX-202ENST00000436441 RAB3GAP2Q9H2M9 1393 aa12.3□□□□□ -0.44
SETX-202ENST00000436441 SOX12O15370 315 aa12.3□□□□□ -0.44
SETX-202ENST00000436441 ROCK2O75116 1388 aaKnown RBP12.3□□□□□ -0.44
SETX-202ENST00000436441 FOXD1Q16676 465 aa12.3□□□□□ -0.44
SETX-202ENST00000436441 HTATSF1O43719 755 aaKnown RBP12.29□□□□□ -0.44
SETX-202ENST00000436441 CALD1Q05682 793 aaKnown RBP12.29□□□□□ -0.44
SETX-202ENST00000436441 SAFB2Q14151 953 aaKnown RBP eCLIP12.29□□□□□ -0.44
SETX-202ENST00000436441 U2AF1L5P0DN76 240 aaPredicted RBP12.28□□□□□ -0.44
SETX-202ENST00000436441 U2AF1Q01081 240 aaKnown RBP eCLIP12.28□□□□□ -0.44
SETX-202ENST00000436441 KANK4Q5T7N3 995 aaPredicted RBP12.27□□□□□ -0.44
SETX-202ENST00000436441 HDGFL2Q7Z4V5 671 aaPredicted RBP12.27□□□□□ -0.44
SETX-202ENST00000436441 CUX2O14529 1486 aa12.27□□□□□ -0.45
SETX-202ENST00000436441 BAZ1AQ9NRL2 1556 aaPredicted RBP12.26□□□□□ -0.45
SETX-202ENST00000436441 MPHOSPH9Q99550 1183 aa12.26□□□□□ -0.45
SETX-202ENST00000436441 TPM4P67936 248 aa12.24□□□□□ -0.45
SETX-202ENST00000436441 NACADO15069 1562 aa12.24□□□□□ -0.45
SETX-202ENST00000436441 SMC4Q9NTJ3 1288 aa12.24□□□□□ -0.45
SETX-202ENST00000436441 HDGFP51858 240 aaKnown RBP12.24□□□□□ -0.45
SETX-202ENST00000436441 PDE3BQ13370 1112 aa12.24□□□□□ -0.45
SETX-202ENST00000436441 CLSTN1O94985 981 aa12.24□□□□□ -0.45
SETX-202ENST00000436441 USP35Q9P2H5 1018 aa12.23□□□□□ -0.45
SETX-202ENST00000436441 TNNT3P45378 269 aaPredicted RBP12.22□□□□□ -0.45
SETX-202ENST00000436441 CSPP1Q1MSJ5 1256 aa12.22□□□□□ -0.45
SETX-202ENST00000436441 STK26Q9P289 416 aa12.22□□□□□ -0.45
SETX-202ENST00000436441 CENPJQ9HC77 1338 aaPredicted RBP12.22□□□□□ -0.45
SETX-202ENST00000436441 FOXD4L1Q9NU39 408 aa12.22□□□□□ -0.45
SETX-202ENST00000436441 EIF3AQ14152 1382 aaKnown RBP12.21□□□□□ -0.45
SETX-202ENST00000436441 NLRP13Q86W25 1043 aa12.21□□□□□ -0.45
SETX-202ENST00000436441 FMN1Q68DA7 1419 aa12.21□□□□□ -0.46
SETX-202ENST00000436441 DDX11L8A8MPP1 907 aa12.2□□□□□ -0.46
SETX-202ENST00000436441 TRIM6-TRIM34B2RNG4 842 aa12.2□□□□□ -0.46
SETX-202ENST00000436441 HMMRO75330 724 aa12.2□□□□□ -0.46
SETX-202ENST00000436441 NUP155O75694 1391 aa12.2□□□□□ -0.46
SETX-202ENST00000436441 CLUAP1Q96AJ1 413 aa12.2□□□□□ -0.46
SETX-202ENST00000436441 ISY1Q9ULR0 285 aaKnown RBP12.2□□□□□ -0.46
SETX-202ENST00000436441 PHF14O94880 888 aa12.19□□□□□ -0.46
SETX-202ENST00000436441 CCDC146Q8IYE0 955 aa12.19□□□□□ -0.46
SETX-202ENST00000436441 NOC3LQ8WTT2 800 aaKnown RBP12.19□□□□□ -0.46
SETX-202ENST00000436441 HSP90B1P14625 803 aaKnown RBP12.19□□□□□ -0.46
SETX-202ENST00000436441 GPATCH3Q96I76 525 aa12.19□□□□□ -0.46
SETX-202ENST00000436441 STK31Q9BXU1 1019 aa12.19□□□□□ -0.46
SETX-202ENST00000436441 RSPH6AQ9H0K4 717 aa12.19□□□□□ -0.46
SETX-202ENST00000436441 PHLDB1Q86UU1 1377 aa12.18□□□□□ -0.46
SETX-202ENST00000436441 HSP90AA2PQ14568 343 aaPredicted RBP12.18□□□□□ -0.46
SETX-202ENST00000436441 NOL8Q76FK4 1167 aaKnown RBP12.18□□□□□ -0.46
SETX-202ENST00000436441 ST18O60284 1047 aa12.18□□□□□ -0.46
SETX-202ENST00000436441 SPAG9O60271 1321 aaKnown RBP12.18□□□□□ -0.46
SETX-202ENST00000436441 GOLGA6L1Q8N7Z2 621 aa12.18□□□□□ -0.46
SETX-202ENST00000436441 ANKRD30AQ9BXX3 1397 aa12.17□□□□□ -0.46
SETX-202ENST00000436441 L3MBTL2Q969R5 705 aa12.17□□□□□ -0.46
SETX-202ENST00000436441 CCDC34Q96HJ3 373 aa12.17□□□□□ -0.46
SETX-202ENST00000436441 ERCC6Q03468 1493 aa12.16□□□□□ -0.46
SETX-202ENST00000436441 PDE4AP27815 886 aa12.16□□□□□ -0.46
SETX-202ENST00000436441 GSE1Q14687 1217 aa12.16□□□□□ -0.46
SETX-202ENST00000436441 CENPQQ7L2Z9 268 aaPredicted RBP12.16□□□□□ -0.46
SETX-202ENST00000436441 CECR2Q9BXF3 1484 aa12.16□□□□□ -0.46
SETX-202ENST00000436441 ABCC8Q09428 1581 aa12.16□□□□□ -0.46
SETX-202ENST00000436441 GGT6Q6P531 493 aa12.16□□□□□ -0.46
SETX-202ENST00000436441 CHMP4AQ9BY43 222 aa12.16□□□□□ -0.46
SETX-202ENST00000436441 FAM161AQ3B820 660 aa12.16□□□□□ -0.46
SETX-202ENST00000436441 KIF15Q9NS87 1388 aa12.16□□□□□ -0.46
SETX-202ENST00000436441 MLECQ14165 292 aa12.15□□□□□ -0.46
SETX-202ENST00000436441 MYBBP1AQ9BQG0 1328 aaKnown RBP12.14□□□□□ -0.47
SETX-202ENST00000436441 HDAC5Q9UQL6 1122 aa12.14□□□□□ -0.47
SETX-202ENST00000436441 KIF16BQ96L93 1317 aa12.14□□□□□ -0.47
SETX-202ENST00000436441 SLC4A10Q6U841 1118 aa12.13□□□□□ -0.47
SETX-202ENST00000436441 GORABQ5T7V8 394 aa12.13□□□□□ -0.47
SETX-202ENST00000436441 SLC4A3P48751 1232 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms