RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 FMN1Q68DA7 1419 aa30.48■■■□□ 2.47
UBXN1-203ENST00000436354 MLECQ14165 292 aa30.48■■■□□ 2.47
UBXN1-203ENST00000436354 ATP1B4Q9UN42 357 aaPredicted RBP30.48■■■□□ 2.47
UBXN1-203ENST00000436354 FER1L4A9Z1Z3 1794 aa30.48■■■□□ 2.47
UBXN1-203ENST00000436354 UBTFP17480 764 aaKnown RBP30.46■■■□□ 2.47
UBXN1-203ENST00000436354 EFCAB2Q5VUJ9 269 aa30.46■■■□□ 2.47
UBXN1-203ENST00000436354 CDK11AQ9UQ88 783 aaPredicted RBP30.46■■■□□ 2.47
UBXN1-203ENST00000436354 MYO5CQ9NQX4 1742 aa30.46■■■□□ 2.47
UBXN1-203ENST00000436354 ATP10AO60312 1499 aa30.44■■■□□ 2.46
UBXN1-203ENST00000436354 C9orf84Q5VXU9 1444 aa30.4■■■□□ 2.46
UBXN1-203ENST00000436354 EHMT2Q96KQ7 1210 aa30.39■■■□□ 2.46
UBXN1-203ENST00000436354 ARHGAP35Q9NRY4 1499 aa30.38■■■□□ 2.45
UBXN1-203ENST00000436354 ARHGEF12Q9NZN5 1544 aa30.38■■■□□ 2.45
UBXN1-203ENST00000436354 KIF14Q15058 1648 aa30.36■■■□□ 2.45
UBXN1-203ENST00000436354 ZNF518AQ6AHZ1 1483 aa30.35■■■□□ 2.45
UBXN1-203ENST00000436354 TROQ12816 1431 aaPredicted RBP30.33■■■□□ 2.45
UBXN1-203ENST00000436354 ARHGAP5Q13017 1502 aa30.32■■■□□ 2.44
UBXN1-203ENST00000436354 CLIP1P30622 1438 aa30.31■■■□□ 2.44
UBXN1-203ENST00000436354 PREX1Q8TCU6 1659 aa30.3■■■□□ 2.44
UBXN1-203ENST00000436354 CERKQ8TCT0 537 aa30.29■■■□□ 2.44
UBXN1-203ENST00000436354 KDM5CP41229 1560 aa30.28■■■□□ 2.44
UBXN1-203ENST00000436354 AFAP1Q8N556 730 aa30.27■■■□□ 2.44
UBXN1-203ENST00000436354 CEBPAP49715 358 aaPredicted RBP30.25■■■□□ 2.43
UBXN1-203ENST00000436354 MYT1LQ9UL68 1186 aa30.25■■■□□ 2.43
UBXN1-203ENST00000436354 LRRIQ1Q96JM4 1722 aa30.23■■■□□ 2.43
UBXN1-203ENST00000436354 DIP2CQ9Y2E4 1556 aa30.2■■■□□ 2.43
UBXN1-203ENST00000436354 CDC42BPBQ9Y5S2 1711 aa30.2■■■□□ 2.43
UBXN1-203ENST00000436354 REREQ9P2R6 1566 aa30.19■■■□□ 2.42
UBXN1-203ENST00000436354 DMRT2Q9Y5R5 561 aa30.17■■■□□ 2.42
UBXN1-203ENST00000436354 MLH3Q9UHC1 1453 aa30.17■■■□□ 2.42
UBXN1-203ENST00000436354 SETD1BQ9UPS6 1966 aaKnown RBP30.17■■■□□ 2.42
UBXN1-203ENST00000436354 UHRF1BP1Q6BDS2 1440 aa30.15■■■□□ 2.42
UBXN1-203ENST00000436354 PREX2Q70Z35 1606 aa30.14■■■□□ 2.42
UBXN1-203ENST00000436354 ABCA6Q8N139 1617 aa30.14■■■□□ 2.41
UBXN1-203ENST00000436354 CHIC1Q5VXU3 224 aa30.13■■■□□ 2.41
UBXN1-203ENST00000436354 STRCQ7RTU9 1775 aa30.13■■■□□ 2.41
UBXN1-203ENST00000436354 CCDC18Q5T9S5 1454 aa30.12■■■□□ 2.41
UBXN1-203ENST00000436354 ABCC1P33527 1531 aa30.11■■■□□ 2.41
UBXN1-203ENST00000436354 CASKIN1Q8WXD9 1431 aa30.1■■■□□ 2.41
UBXN1-203ENST00000436354 AGLP35573 1532 aa30.1■■■□□ 2.41
UBXN1-203ENST00000436354 ESF1Q9H501 851 aaKnown RBP30.09■■■□□ 2.41
UBXN1-203ENST00000436354 TRAPPC8Q9Y2L5 1435 aa30.09■■■□□ 2.41
UBXN1-203ENST00000436354 ITSN2Q9NZM3 1697 aa30.08■■■□□ 2.41
UBXN1-203ENST00000436354 C3P01024 1663 aa30.07■■■□□ 2.41
UBXN1-203ENST00000436354 CDC42BPAQ5VT25 1732 aa30.02■■■□□ 2.4
UBXN1-203ENST00000436354 KIDINS220Q9ULH0 1771 aa30.02■■■□□ 2.4
UBXN1-203ENST00000436354 PTPRTO14522 1441 aa29.98■■■□□ 2.39
UBXN1-203ENST00000436354 CNTLNQ9NXG0 1405 aa29.98■■■□□ 2.39
UBXN1-203ENST00000436354 FYCO1Q9BQS8 1478 aa29.96■■■□□ 2.39
UBXN1-203ENST00000436354 ZNF777Q9ULD5 760 aaPredicted RBP29.93■■■□□ 2.38
UBXN1-203ENST00000436354 SAMD9LQ8IVG5 1584 aa29.93■■■□□ 2.38
UBXN1-203ENST00000436354 MROH2AA6NES4 1674 aa29.88■■■□□ 2.37
UBXN1-203ENST00000436354 SPAG9O60271 1321 aaKnown RBP29.88■■■□□ 2.37
UBXN1-203ENST00000436354 SYCP2Q9BX26 1530 aa29.87■■■□□ 2.37
UBXN1-203ENST00000436354 GPATCH8Q9UKJ3 1502 aaKnown RBP29.87■■■□□ 2.37
UBXN1-203ENST00000436354 NPATQ14207 1427 aa29.86■■■□□ 2.37
UBXN1-203ENST00000436354 NCOA1Q15788 1441 aa29.86■■■□□ 2.37
UBXN1-203ENST00000436354 HNRNPMP52272 730 aaKnown RBP eCLIP29.84■■■□□ 2.37
UBXN1-203ENST00000436354 SUPT6HQ7KZ85 1726 aaKnown RBP29.83■■■□□ 2.37
UBXN1-203ENST00000436354 ZMYM3Q14202 1370 aa29.82■■■□□ 2.36
UBXN1-203ENST00000436354 DISP3Q9P2K9 1392 aa29.82■■■□□ 2.36
UBXN1-203ENST00000436354 LTBP4Q8N2S1 1624 aa29.82■■■□□ 2.36
UBXN1-203ENST00000436354 KIAA1107Q9UPP5 1409 aa29.81■■■□□ 2.36
UBXN1-203ENST00000436354 ATP7AQ04656 1500 aa29.81■■■□□ 2.36
UBXN1-203ENST00000436354 PLEKHH2Q8IVE3 1493 aa29.8■■■□□ 2.36
UBXN1-203ENST00000436354 CFDP1Q9UEE9 299 aaPredicted RBP29.8■■■□□ 2.36
UBXN1-203ENST00000436354 CAMSAP1Q5T5Y3 1602 aa29.78■■■□□ 2.36
UBXN1-203ENST00000436354 IQSEC2Q5JU85 1478 aa29.78■■■□□ 2.36
UBXN1-203ENST00000436354 INO80Q9ULG1 1556 aaPredicted RBP29.77■■■□□ 2.36
UBXN1-203ENST00000436354 CCNB3Q8WWL7 1395 aa29.77■■■□□ 2.36
UBXN1-203ENST00000436354 A2MP01023 1474 aa29.75■■■□□ 2.35
UBXN1-203ENST00000436354 PLXNC1O60486 1568 aa29.75■■■□□ 2.35
UBXN1-203ENST00000436354 CLTCQ00610 1675 aaKnown RBP29.75■■■□□ 2.35
UBXN1-203ENST00000436354 MTUS2Q5JR59 1369 aa29.71■■■□□ 2.35
UBXN1-203ENST00000436354 ILDR2Q71H61 639 aa29.7■■■□□ 2.35
UBXN1-203ENST00000436354 ZNF142P52746 1687 aaPredicted RBP29.69■■■□□ 2.34
UBXN1-203ENST00000436354 MYO3AQ8NEV4 1616 aa29.68■■■□□ 2.34
UBXN1-203ENST00000436354 GGT6Q6P531 493 aa29.68■■■□□ 2.34
UBXN1-203ENST00000436354 NCKAP5LQ9HCH0 1330 aa29.68■■■□□ 2.34
UBXN1-203ENST00000436354 ADGBQ8N7X0 1667 aa29.67■■■□□ 2.34
UBXN1-203ENST00000436354 PPP6R1Q9UPN7 881 aa29.67■■■□□ 2.34
UBXN1-203ENST00000436354 PTPRKQ15262 1439 aa29.66■■■□□ 2.34
UBXN1-203ENST00000436354 PLA2R1Q13018 1463 aa29.65■■■□□ 2.34
UBXN1-203ENST00000436354 SPATA31D1Q6ZQQ2 1576 aa29.64■■■□□ 2.34
UBXN1-203ENST00000436354 PKD2Q13563 968 aa29.64■■■□□ 2.34
UBXN1-203ENST00000436354 CEP170BQ9Y4F5 1589 aaPredicted RBP29.64■■■□□ 2.33
UBXN1-203ENST00000436354 SOCS7O14512 581 aa29.62■■■□□ 2.33
UBXN1-203ENST00000436354 ZNF335Q9H4Z2 1342 aaPredicted RBP29.6■■■□□ 2.33
UBXN1-203ENST00000436354 ZNF644Q9H582 1327 aaPredicted RBP29.59■■■□□ 2.33
UBXN1-203ENST00000436354 TCOF1Q13428 1488 aaKnown RBP29.59■■■□□ 2.33
UBXN1-203ENST00000436354 TIAM1Q13009 1591 aa29.59■■■□□ 2.33
UBXN1-203ENST00000436354 EHBP1L1Q8N3D4 1523 aa29.57■■■□□ 2.32
UBXN1-203ENST00000436354 MBD5Q9P267 1494 aa29.57■■■□□ 2.32
UBXN1-203ENST00000436354 RTEL1-TNFRSF6BF6WH68 1400 aa29.56■■■□□ 2.32
UBXN1-203ENST00000436354 UBAP1LF5GYI3 381 aa29.53■■■□□ 2.32
UBXN1-203ENST00000436354 CEP162Q5TB80 1403 aa29.52■■■□□ 2.32
UBXN1-203ENST00000436354 DHX29Q7Z478 1369 aaKnown RBP29.52■■■□□ 2.32
UBXN1-203ENST00000436354 A2ML1A8K2U0 1454 aa29.51■■■□□ 2.31
UBXN1-203ENST00000436354 DNMT1P26358 1616 aaKnown RBP29.49■■■□□ 2.31
UBXN1-203ENST00000436354 KIF3BO15066 747 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 340.9 ms