RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 IPO9Q96P70 1041 aaKnown RBP9.79□□□□□ -0.84
GARNL3-205ENST00000435213 CHMP4BQ9H444 224 aaKnown RBP9.79□□□□□ -0.84
GARNL3-205ENST00000435213 HAP1P54257 671 aaPredicted RBP9.79□□□□□ -0.84
GARNL3-205ENST00000435213 FYCO1Q9BQS8 1478 aa9.77□□□□□ -0.85
GARNL3-205ENST00000435213 SAMD1Q6SPF0 538 aaPredicted RBP9.77□□□□□ -0.85
GARNL3-205ENST00000435213 C14orf37Q86TY3 774 aa9.76□□□□□ -0.85
GARNL3-205ENST00000435213 PPM1GO15355 546 aaPredicted RBP9.76□□□□□ -0.85
GARNL3-205ENST00000435213 BCCIPQ9P287 314 aaKnown RBP eCLIP9.76□□□□□ -0.85
GARNL3-205ENST00000435213 EFCAB5A4FU69 1503 aa9.76□□□□□ -0.85
GARNL3-205ENST00000435213 AQRO60306 1485 aaKnown RBP eCLIP9.76□□□□□ -0.85
GARNL3-205ENST00000435213 GSE1Q14687 1217 aa9.75□□□□□ -0.85
GARNL3-205ENST00000435213 ERCC6Q03468 1493 aa9.75□□□□□ -0.85
GARNL3-205ENST00000435213 TONSLQ96HA7 1378 aa9.75□□□□□ -0.85
GARNL3-205ENST00000435213 FANCD2Q9BXW9 1451 aa9.75□□□□□ -0.85
GARNL3-205ENST00000435213 PRDM4Q9UKN5 801 aa9.75□□□□□ -0.85
GARNL3-205ENST00000435213 PTPN23Q9H3S7 1636 aa9.74□□□□□ -0.85
GARNL3-205ENST00000435213 CENPJQ9HC77 1338 aaPredicted RBP9.74□□□□□ -0.85
GARNL3-205ENST00000435213 IGF1RP08069 1367 aa9.74□□□□□ -0.85
GARNL3-205ENST00000435213 CCDC18Q5T9S5 1454 aa9.74□□□□□ -0.85
GARNL3-205ENST00000435213 URB2Q14146 1524 aaKnown RBP9.74□□□□□ -0.85
GARNL3-205ENST00000435213 FAM50AQ14320 339 aaKnown RBP9.74□□□□□ -0.85
GARNL3-205ENST00000435213 UACAQ9BZF9 1416 aa9.74□□□□□ -0.85
GARNL3-205ENST00000435213 ABCA10Q8WWZ4 1543 aa9.74□□□□□ -0.85
GARNL3-205ENST00000435213 TOPBP1Q92547 1522 aa9.74□□□□□ -0.85
GARNL3-205ENST00000435213 GTF2E1P29083 439 aaPredicted RBP9.73□□□□□ -0.85
GARNL3-205ENST00000435213 CTTNBP2Q8WZ74 1663 aa9.73□□□□□ -0.85
GARNL3-205ENST00000435213 FGD5Q6ZNL6 1462 aa9.73□□□□□ -0.85
GARNL3-205ENST00000435213 CUL7Q14999 1698 aa9.72□□□□□ -0.85
GARNL3-205ENST00000435213 KDM5BQ9UGL1 1544 aa9.72□□□□□ -0.85
GARNL3-205ENST00000435213 CARMIL1Q5VZK9 1371 aa9.72□□□□□ -0.85
GARNL3-205ENST00000435213 CASKIN1Q8WXD9 1431 aa9.72□□□□□ -0.85
GARNL3-205ENST00000435213 NCOA2Q15596 1464 aa9.71□□□□□ -0.85
GARNL3-205ENST00000435213 HFM1A2PYH4 1435 aa9.71□□□□□ -0.85
GARNL3-205ENST00000435213 PBRM1Q86U86 1689 aa9.71□□□□□ -0.85
GARNL3-205ENST00000435213 RGS3P49796 1198 aa9.71□□□□□ -0.85
GARNL3-205ENST00000435213 FTSJ3Q8IY81 847 aaKnown RBP9.71□□□□□ -0.85
GARNL3-205ENST00000435213 HSP90B1P14625 803 aaKnown RBP9.7□□□□□ -0.86
GARNL3-205ENST00000435213 PPP4R2Q9NY27 417 aa9.7□□□□□ -0.86
GARNL3-205ENST00000435213 FGD6Q6ZV73 1430 aa9.7□□□□□ -0.86
GARNL3-205ENST00000435213 POLR1AO95602 1720 aaPredicted RBP9.7□□□□□ -0.86
GARNL3-205ENST00000435213 HNRNPUQ00839 825 aaKnown RBP eCLIP9.7□□□□□ -0.86
GARNL3-205ENST00000435213 TEX2Q8IWB9 1127 aa9.7□□□□□ -0.86
GARNL3-205ENST00000435213 STAC3Q96MF2 364 aa9.7□□□□□ -0.86
GARNL3-205ENST00000435213 ZFP91Q96JP5 570 aaPredicted RBP9.7□□□□□ -0.86
GARNL3-205ENST00000435213 HECW1Q76N89 1606 aa9.7□□□□□ -0.86
GARNL3-205ENST00000435213 CNKSR2Q8WXI2 1034 aa9.69□□□□□ -0.86
GARNL3-205ENST00000435213 HIRIP3Q9BW71 556 aaPredicted RBP9.69□□□□□ -0.86
GARNL3-205ENST00000435213 PDCL3Q9H2J4 239 aa9.69□□□□□ -0.86
GARNL3-205ENST00000435213 GCC2Q8IWJ2 1684 aa9.69□□□□□ -0.86
GARNL3-205ENST00000435213 MRC2Q9UBG0 1479 aa9.68□□□□□ -0.86
GARNL3-205ENST00000435213 CDK11BP21127 795 aaKnown RBP9.68□□□□□ -0.86
GARNL3-205ENST00000435213 PDS5BQ9NTI5 1447 aa9.68□□□□□ -0.86
GARNL3-205ENST00000435213 PNNQ9H307 717 aaKnown RBP9.68□□□□□ -0.86
GARNL3-205ENST00000435213 FBLN2P98095 1184 aa9.67□□□□□ -0.86
GARNL3-205ENST00000435213 CNTLNQ9NXG0 1405 aa9.67□□□□□ -0.86
GARNL3-205ENST00000435213 ARID4BQ4LE39 1312 aaPredicted RBP9.66□□□□□ -0.86
GARNL3-205ENST00000435213 AMER1Q5JTC6 1135 aaPredicted RBP9.66□□□□□ -0.86
GARNL3-205ENST00000435213 SUPT6HQ7KZ85 1726 aaKnown RBP9.66□□□□□ -0.86
GARNL3-205ENST00000435213 FBXO3Q9UK99 471 aa9.65□□□□□ -0.86
GARNL3-205ENST00000435213 LRRIQ1Q96JM4 1722 aa9.65□□□□□ -0.86
GARNL3-205ENST00000435213 POLA1P09884 1462 aaPredicted RBP9.65□□□□□ -0.86
GARNL3-205ENST00000435213 FHOD3Q2V2M9 1422 aa9.65□□□□□ -0.87
GARNL3-205ENST00000435213 NAIPQ13075 1403 aa9.64□□□□□ -0.87
GARNL3-205ENST00000435213 FMN1Q68DA7 1419 aa9.64□□□□□ -0.87
GARNL3-205ENST00000435213 SNAPC4Q5SXM2 1469 aa9.64□□□□□ -0.87
GARNL3-205ENST00000435213 CHRM1P11229 460 aaPredicted RBP9.63□□□□□ -0.87
GARNL3-205ENST00000435213 IRX6P78412 446 aaPredicted RBP9.63□□□□□ -0.87
GARNL3-205ENST00000435213 EHBP1L1Q8N3D4 1523 aa9.63□□□□□ -0.87
GARNL3-205ENST00000435213 ZBED9Q6R2W3 1325 aa9.62□□□□□ -0.87
GARNL3-205ENST00000435213 PTPRKQ15262 1439 aa9.62□□□□□ -0.87
GARNL3-205ENST00000435213 SECISBP2LQ93073 1101 aaKnown RBP9.62□□□□□ -0.87
GARNL3-205ENST00000435213 MYOM3Q5VTT5 1437 aa9.62□□□□□ -0.87
GARNL3-205ENST00000435213 SAMD9Q5K651 1589 aa9.62□□□□□ -0.87
GARNL3-205ENST00000435213 AKNAQ7Z591 1439 aa9.61□□□□□ -0.87
GARNL3-205ENST00000435213 NCOA1Q15788 1441 aa9.6□□□□□ -0.87
GARNL3-205ENST00000435213 LAS1LQ9Y4W2 734 aaKnown RBP9.6□□□□□ -0.87
GARNL3-205ENST00000435213 ADAMTS12P58397 1594 aa9.6□□□□□ -0.87
GARNL3-205ENST00000435213 HSPA5P11021 654 aaKnown RBP9.59□□□□□ -0.87
GARNL3-205ENST00000435213 FRAT1Q92837 279 aaPredicted RBP9.59□□□□□ -0.87
GARNL3-205ENST00000435213 ARHGEF11O15085 1522 aa9.59□□□□□ -0.87
GARNL3-205ENST00000435213 MTUS2Q5JR59 1369 aa9.59□□□□□ -0.87
GARNL3-205ENST00000435213 UGGT2Q9NYU1 1516 aa9.59□□□□□ -0.87
GARNL3-205ENST00000435213 TCOF1Q13428 1488 aaKnown RBP9.58□□□□□ -0.88
GARNL3-205ENST00000435213 TPM2P07951 284 aa9.58□□□□□ -0.88
GARNL3-205ENST00000435213 EIF4G2P78344 907 aaKnown RBP eCLIP9.58□□□□□ -0.88
GARNL3-205ENST00000435213 GRIN2BQ13224 1484 aa9.58□□□□□ -0.88
GARNL3-205ENST00000435213 SMAP1Q8IYB5 467 aaPredicted RBP9.57□□□□□ -0.88
GARNL3-205ENST00000435213 CCDC7Q96M83 1385 aa9.57□□□□□ -0.88
GARNL3-205ENST00000435213 IFT140Q96RY7 1462 aa9.57□□□□□ -0.88
GARNL3-205ENST00000435213 SMG6Q86US8 1419 aaKnown RBP9.57□□□□□ -0.88
GARNL3-205ENST00000435213 DENND4BO75064 1496 aaPredicted RBP9.57□□□□□ -0.88
GARNL3-205ENST00000435213 MAP7D2Q96T17 732 aa9.57□□□□□ -0.88
GARNL3-205ENST00000435213 RRAGDQ9NQL2 400 aaPredicted RBP9.57□□□□□ -0.88
GARNL3-205ENST00000435213 ATP1B4Q9UN42 357 aaPredicted RBP9.57□□□□□ -0.88
GARNL3-205ENST00000435213 CLCN1P35523 988 aa9.56□□□□□ -0.88
GARNL3-205ENST00000435213 TNNT2P45379 298 aaPredicted RBP9.56□□□□□ -0.88
GARNL3-205ENST00000435213 PRKRIP1Q9H875 184 aaPredicted RBP9.56□□□□□ -0.88
GARNL3-205ENST00000435213 EIF4G3O43432 1585 aaKnown RBP9.56□□□□□ -0.88
GARNL3-205ENST00000435213 P3H3Q8IVL6 736 aa9.56□□□□□ -0.88
GARNL3-205ENST00000435213 B4GALNT3Q6L9W6 998 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms