RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 SIGLEC1Q9BZZ2 1709 aa19.31■□□□□ 0.68
CHRNA1-207ENST00000435083 MAGI2Q86UL8 1455 aa19.31■□□□□ 0.68
CHRNA1-207ENST00000435083 PLCH2O75038 1416 aa19.3■□□□□ 0.68
CHRNA1-207ENST00000435083 UBTFP17480 764 aaKnown RBP19.29■□□□□ 0.68
CHRNA1-207ENST00000435083 EFCAB2Q5VUJ9 269 aa19.26■□□□□ 0.67
CHRNA1-207ENST00000435083 FER1L4A9Z1Z3 1794 aa19.25■□□□□ 0.67
CHRNA1-207ENST00000435083 CDK11AQ9UQ88 783 aaPredicted RBP19.24■□□□□ 0.67
CHRNA1-207ENST00000435083 FMN1Q68DA7 1419 aa19.24■□□□□ 0.67
CHRNA1-207ENST00000435083 MYO5CQ9NQX4 1742 aa19.23■□□□□ 0.67
CHRNA1-207ENST00000435083 ATP10AO60312 1499 aa19.23■□□□□ 0.67
CHRNA1-207ENST00000435083 C9orf84Q5VXU9 1444 aa19.2■□□□□ 0.66
CHRNA1-207ENST00000435083 ARHGAP35Q9NRY4 1499 aa19.2■□□□□ 0.66
CHRNA1-207ENST00000435083 KIF14Q15058 1648 aa19.19■□□□□ 0.66
CHRNA1-207ENST00000435083 MYT1LQ9UL68 1186 aa19.19■□□□□ 0.66
CHRNA1-207ENST00000435083 ARHGEF12Q9NZN5 1544 aa19.18■□□□□ 0.66
CHRNA1-207ENST00000435083 CEBPAP49715 358 aaPredicted RBP19.17■□□□□ 0.66
CHRNA1-207ENST00000435083 ARHGAP5Q13017 1502 aa19.17■□□□□ 0.66
CHRNA1-207ENST00000435083 CERKQ8TCT0 537 aa19.16■□□□□ 0.66
CHRNA1-207ENST00000435083 TROQ12816 1431 aaPredicted RBP19.16■□□□□ 0.66
CHRNA1-207ENST00000435083 AFAP1Q8N556 730 aa19.15■□□□□ 0.66
CHRNA1-207ENST00000435083 ZNF518AQ6AHZ1 1483 aa19.15■□□□□ 0.66
CHRNA1-207ENST00000435083 CLIP1P30622 1438 aa19.15■□□□□ 0.66
CHRNA1-207ENST00000435083 PREX1Q8TCU6 1659 aa19.13■□□□□ 0.65
CHRNA1-207ENST00000435083 LRRIQ1Q96JM4 1722 aa19.11■□□□□ 0.65
CHRNA1-207ENST00000435083 KDM5CP41229 1560 aa19.1■□□□□ 0.65
CHRNA1-207ENST00000435083 CHIC1Q5VXU3 224 aa19.08■□□□□ 0.65
CHRNA1-207ENST00000435083 DIP2CQ9Y2E4 1556 aa19.08■□□□□ 0.64
CHRNA1-207ENST00000435083 CDC42BPBQ9Y5S2 1711 aa19.08■□□□□ 0.64
CHRNA1-207ENST00000435083 UHRF1BP1Q6BDS2 1440 aa19.06■□□□□ 0.64
CHRNA1-207ENST00000435083 DMRT2Q9Y5R5 561 aa19.06■□□□□ 0.64
CHRNA1-207ENST00000435083 ABCA6Q8N139 1617 aa19.04■□□□□ 0.64
CHRNA1-207ENST00000435083 MLH3Q9UHC1 1453 aa19.04■□□□□ 0.64
CHRNA1-207ENST00000435083 ESF1Q9H501 851 aaKnown RBP19.04■□□□□ 0.64
CHRNA1-207ENST00000435083 TRAPPC8Q9Y2L5 1435 aa19.03■□□□□ 0.64
CHRNA1-207ENST00000435083 STRCQ7RTU9 1775 aa19.03■□□□□ 0.64
CHRNA1-207ENST00000435083 REREQ9P2R6 1566 aa19.03■□□□□ 0.64
CHRNA1-207ENST00000435083 PREX2Q70Z35 1606 aa19.03■□□□□ 0.64
CHRNA1-207ENST00000435083 SETD1BQ9UPS6 1966 aaKnown RBP19.03■□□□□ 0.64
CHRNA1-207ENST00000435083 CCDC18Q5T9S5 1454 aa19.01■□□□□ 0.63
CHRNA1-207ENST00000435083 CASKIN1Q8WXD9 1431 aa19.01■□□□□ 0.63
CHRNA1-207ENST00000435083 ABCC1P33527 1531 aa19.01■□□□□ 0.63
CHRNA1-207ENST00000435083 C3P01024 1663 aa19■□□□□ 0.63
CHRNA1-207ENST00000435083 ITSN2Q9NZM3 1697 aa19■□□□□ 0.63
CHRNA1-207ENST00000435083 AGLP35573 1532 aa18.98■□□□□ 0.63
CHRNA1-207ENST00000435083 ZNF777Q9ULD5 760 aaPredicted RBP18.97■□□□□ 0.63
CHRNA1-207ENST00000435083 KIDINS220Q9ULH0 1771 aa18.96■□□□□ 0.63
CHRNA1-207ENST00000435083 CDC42BPAQ5VT25 1732 aa18.96■□□□□ 0.63
CHRNA1-207ENST00000435083 PTPRTO14522 1441 aa18.93■□□□□ 0.62
CHRNA1-207ENST00000435083 CNTLNQ9NXG0 1405 aa18.92■□□□□ 0.62
CHRNA1-207ENST00000435083 FYCO1Q9BQS8 1478 aa18.91■□□□□ 0.62
CHRNA1-207ENST00000435083 SAMD9LQ8IVG5 1584 aa18.91■□□□□ 0.62
CHRNA1-207ENST00000435083 HNRNPMP52272 730 aaKnown RBP eCLIP18.9■□□□□ 0.62
CHRNA1-207ENST00000435083 SPAG9O60271 1321 aaKnown RBP18.9■□□□□ 0.62
CHRNA1-207ENST00000435083 DISP3Q9P2K9 1392 aa18.89■□□□□ 0.61
CHRNA1-207ENST00000435083 SYCP2Q9BX26 1530 aa18.88■□□□□ 0.61
CHRNA1-207ENST00000435083 SUPT6HQ7KZ85 1726 aaKnown RBP18.87■□□□□ 0.61
CHRNA1-207ENST00000435083 GPATCH8Q9UKJ3 1502 aaKnown RBP18.87■□□□□ 0.61
CHRNA1-207ENST00000435083 ZMYM3Q14202 1370 aa18.86■□□□□ 0.61
CHRNA1-207ENST00000435083 NCOA1Q15788 1441 aa18.85■□□□□ 0.61
CHRNA1-207ENST00000435083 MROH2AA6NES4 1674 aa18.85■□□□□ 0.61
CHRNA1-207ENST00000435083 CFDP1Q9UEE9 299 aaPredicted RBP18.85■□□□□ 0.61
CHRNA1-207ENST00000435083 NPATQ14207 1427 aa18.84■□□□□ 0.61
CHRNA1-207ENST00000435083 CAMSAP1Q5T5Y3 1602 aa18.83■□□□□ 0.61
CHRNA1-207ENST00000435083 LTBP4Q8N2S1 1624 aa18.83■□□□□ 0.61
CHRNA1-207ENST00000435083 ATP7AQ04656 1500 aa18.82■□□□□ 0.6
CHRNA1-207ENST00000435083 CCNB3Q8WWL7 1395 aa18.82■□□□□ 0.6
CHRNA1-207ENST00000435083 ILDR2Q71H61 639 aa18.81■□□□□ 0.6
CHRNA1-207ENST00000435083 KIAA1107Q9UPP5 1409 aa18.81■□□□□ 0.6
CHRNA1-207ENST00000435083 PLEKHH2Q8IVE3 1493 aa18.81■□□□□ 0.6
CHRNA1-207ENST00000435083 CLTCQ00610 1675 aaKnown RBP18.81■□□□□ 0.6
CHRNA1-207ENST00000435083 GGT6Q6P531 493 aa18.81■□□□□ 0.6
CHRNA1-207ENST00000435083 NCKAP5LQ9HCH0 1330 aa18.8■□□□□ 0.6
CHRNA1-207ENST00000435083 A2MP01023 1474 aa18.8■□□□□ 0.6
CHRNA1-207ENST00000435083 MTUS2Q5JR59 1369 aa18.79■□□□□ 0.6
CHRNA1-207ENST00000435083 INO80Q9ULG1 1556 aaPredicted RBP18.79■□□□□ 0.6
CHRNA1-207ENST00000435083 IQSEC2Q5JU85 1478 aa18.77■□□□□ 0.6
CHRNA1-207ENST00000435083 PLXNC1O60486 1568 aa18.77■□□□□ 0.6
CHRNA1-207ENST00000435083 MYO3AQ8NEV4 1616 aa18.74■□□□□ 0.59
CHRNA1-207ENST00000435083 ZNF335Q9H4Z2 1342 aaPredicted RBP18.74■□□□□ 0.59
CHRNA1-207ENST00000435083 ZNF644Q9H582 1327 aaPredicted RBP18.74■□□□□ 0.59
CHRNA1-207ENST00000435083 PTPRKQ15262 1439 aa18.74■□□□□ 0.59
CHRNA1-207ENST00000435083 SPATA31D1Q6ZQQ2 1576 aa18.74■□□□□ 0.59
CHRNA1-207ENST00000435083 SOCS7O14512 581 aa18.73■□□□□ 0.59
CHRNA1-207ENST00000435083 ZNF142P52746 1687 aaPredicted RBP18.73■□□□□ 0.59
CHRNA1-207ENST00000435083 ADGBQ8N7X0 1667 aa18.73■□□□□ 0.59
CHRNA1-207ENST00000435083 PKD2Q13563 968 aa18.72■□□□□ 0.59
CHRNA1-207ENST00000435083 PPP6R1Q9UPN7 881 aa18.72■□□□□ 0.59
CHRNA1-207ENST00000435083 CEP170BQ9Y4F5 1589 aaPredicted RBP18.72■□□□□ 0.59
CHRNA1-207ENST00000435083 PLA2R1Q13018 1463 aa18.7■□□□□ 0.58
CHRNA1-207ENST00000435083 UBAP1LF5GYI3 381 aa18.7■□□□□ 0.58
CHRNA1-207ENST00000435083 TIAM1Q13009 1591 aa18.7■□□□□ 0.58
CHRNA1-207ENST00000435083 TCOF1Q13428 1488 aaKnown RBP18.68■□□□□ 0.58
CHRNA1-207ENST00000435083 EHBP1L1Q8N3D4 1523 aa18.67■□□□□ 0.58
CHRNA1-207ENST00000435083 MBD5Q9P267 1494 aa18.67■□□□□ 0.58
CHRNA1-207ENST00000435083 RTEL1-TNFRSF6BF6WH68 1400 aa18.66■□□□□ 0.58
CHRNA1-207ENST00000435083 DHX29Q7Z478 1369 aaKnown RBP18.65■□□□□ 0.58
CHRNA1-207ENST00000435083 KIF3BO15066 747 aa18.64■□□□□ 0.58
CHRNA1-207ENST00000435083 A2ML1A8K2U0 1454 aa18.64■□□□□ 0.57
CHRNA1-207ENST00000435083 CEP162Q5TB80 1403 aa18.63■□□□□ 0.57
CHRNA1-207ENST00000435083 DNMT1P26358 1616 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms