RNA–Protein interactions for RNA: ENST00000434453.1

LMBR1-209, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 2,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-209ENST00000434453 FOXD1Q16676 465 aa35.02■■■■□ 3.2
LMBR1-209ENST00000434453 PRG4Q92954 1404 aaPredicted RBP35■■■■□ 3.19
LMBR1-209ENST00000434453 SYNJ2O15056 1496 aa34.99■■■■□ 3.19
LMBR1-209ENST00000434453 HSPA5P11021 654 aaKnown RBP34.99■■■■□ 3.19
LMBR1-209ENST00000434453 TROQ12816 1431 aaPredicted RBP34.98■■■■□ 3.19
LMBR1-209ENST00000434453 PLB1Q6P1J6 1458 aa34.98■■■■□ 3.19
LMBR1-209ENST00000434453 ANKRD30BQ9BXX2 1392 aa34.98■■■■□ 3.19
LMBR1-209ENST00000434453 L3MBTL2Q969R5 705 aa34.97■■■■□ 3.19
LMBR1-209ENST00000434453 CDK11AQ9UQ88 783 aaPredicted RBP34.97■■■■□ 3.19
LMBR1-209ENST00000434453 WASHC2AQ641Q2 1341 aa34.96■■■■□ 3.19
LMBR1-209ENST00000434453 RPRD2Q5VT52 1461 aaKnown RBP34.93■■■■□ 3.18
LMBR1-209ENST00000434453 ADCY10Q96PN6 1610 aa34.92■■■■□ 3.18
LMBR1-209ENST00000434453 CHMP7Q8WUX9 453 aaPredicted RBP34.92■■■■□ 3.18
LMBR1-209ENST00000434453 KIF14Q15058 1648 aa34.92■■■■□ 3.18
LMBR1-209ENST00000434453 ITSN2Q9NZM3 1697 aa34.91■■■■□ 3.18
LMBR1-209ENST00000434453 CAMSAP2Q08AD1 1489 aa34.91■■■■□ 3.18
LMBR1-209ENST00000434453 TEX14Q8IWB6 1497 aa34.9■■■■□ 3.18
LMBR1-209ENST00000434453 GPATCH8Q9UKJ3 1502 aaKnown RBP34.88■■■■□ 3.17
LMBR1-209ENST00000434453 NUP160Q12769 1436 aa34.88■■■■□ 3.17
LMBR1-209ENST00000434453 EIF4G2P78344 907 aaKnown RBP eCLIP34.86■■■■□ 3.17
LMBR1-209ENST00000434453 ADGBQ8N7X0 1667 aa34.85■■■■□ 3.17
LMBR1-209ENST00000434453 CROCC2H7BZ55 1655 aa34.83■■■■□ 3.17
LMBR1-209ENST00000434453 PZPP20742 1482 aa34.82■■■■□ 3.16
LMBR1-209ENST00000434453 NCOA1Q15788 1441 aa34.82■■■■□ 3.16
LMBR1-209ENST00000434453 CFDP1Q9UEE9 299 aaPredicted RBP34.82■■■■□ 3.16
LMBR1-209ENST00000434453 NBPF8Q3BBV2 869 aa34.81■■■■□ 3.16
LMBR1-209ENST00000434453 SLC4A1APQ9BWU0 796 aaKnown RBP34.8■■■■□ 3.16
LMBR1-209ENST00000434453 JPH4Q96JJ6 628 aa34.79■■■■□ 3.16
LMBR1-209ENST00000434453 FBLN2P98095 1184 aa34.79■■■■□ 3.16
LMBR1-209ENST00000434453 FKBP8Q14318 412 aa34.79■■■■□ 3.16
LMBR1-209ENST00000434453 CARMIL2Q6F5E8 1435 aa34.79■■■■□ 3.16
LMBR1-209ENST00000434453 ADGRL2O95490 1459 aa34.77■■■■□ 3.16
LMBR1-209ENST00000434453 C11orf95C9JLR9 678 aaPredicted RBP34.76■■■■□ 3.16
LMBR1-209ENST00000434453 CNTLNQ9NXG0 1405 aa34.74■■■■□ 3.15
LMBR1-209ENST00000434453 ABCA8O94911 1581 aa34.72■■■■□ 3.15
LMBR1-209ENST00000434453 BCANQ96GW7 911 aa34.71■■■■□ 3.15
LMBR1-209ENST00000434453 TSHZ2Q9NRE2 1034 aa34.71■■■■□ 3.15
LMBR1-209ENST00000434453 CDC42BPAQ5VT25 1732 aa34.71■■■■□ 3.15
LMBR1-209ENST00000434453 CCDC7Q96M83 1385 aa34.7■■■■□ 3.15
LMBR1-209ENST00000434453 SPATA31E1Q6ZUB1 1445 aa34.7■■■■□ 3.14
LMBR1-209ENST00000434453 ZNF777Q9ULD5 760 aaPredicted RBP34.67■■■■□ 3.14
LMBR1-209ENST00000434453 POLR1AO95602 1720 aaPredicted RBP34.66■■■■□ 3.14
LMBR1-209ENST00000434453 ABCC10Q5T3U5 1492 aa34.65■■■■□ 3.14
LMBR1-209ENST00000434453 ATP10BO94823 1461 aa34.63■■■■□ 3.13
LMBR1-209ENST00000434453 MBD5Q9P267 1494 aa34.61■■■■□ 3.13
LMBR1-209ENST00000434453 KIAA1107Q9UPP5 1409 aa34.61■■■■□ 3.13
LMBR1-209ENST00000434453 ANKRD30AQ9BXX3 1397 aa34.6■■■■□ 3.13
LMBR1-209ENST00000434453 NEFLP07196 543 aa34.56■■■■□ 3.12
LMBR1-209ENST00000434453 HNRNPUQ00839 825 aaKnown RBP eCLIP34.56■■■■□ 3.12
LMBR1-209ENST00000434453 CCDC184Q52MB2 194 aa34.56■■■■□ 3.12
LMBR1-209ENST00000434453 ANKRD50Q9ULJ7 1429 aa34.55■■■■□ 3.12
LMBR1-209ENST00000434453 PLEKHD1A6NEE1 506 aa34.55■■■■□ 3.12
LMBR1-209ENST00000434453 KIF7Q2M1P5 1343 aa34.53■■■■□ 3.12
LMBR1-209ENST00000434453 SHANK2Q9UPX8 1470 aa34.53■■■■□ 3.12
LMBR1-209ENST00000434453 PRKRIP1Q9H875 184 aaPredicted RBP34.52■■■■□ 3.12
LMBR1-209ENST00000434453 PKD2Q13563 968 aa34.51■■■■□ 3.11
LMBR1-209ENST00000434453 C9orf84Q5VXU9 1444 aa34.49■■■■□ 3.11
LMBR1-209ENST00000434453 BCORL1Q5H9F3 1711 aa34.43■■■■□ 3.1
LMBR1-209ENST00000434453 KDM5DQ9BY66 1539 aa34.4■■■■□ 3.1
LMBR1-209ENST00000434453 ARHGEF5Q12774 1597 aa34.38■■■■□ 3.09
LMBR1-209ENST00000434453 NUP155O75694 1391 aa34.38■■■■□ 3.09
LMBR1-209ENST00000434453 KDM5CP41229 1560 aa34.37■■■■□ 3.09
LMBR1-209ENST00000434453 USP47Q96K76 1375 aa34.36■■■■□ 3.09
LMBR1-209ENST00000434453 CDC42BPBQ9Y5S2 1711 aa34.35■■■■□ 3.09
LMBR1-209ENST00000434453 PTPRGP23470 1445 aa34.35■■■■□ 3.09
LMBR1-209ENST00000434453 UHRF1BP1Q6BDS2 1440 aa34.33■■■■□ 3.09
LMBR1-209ENST00000434453 HNRNPMP52272 730 aaKnown RBP eCLIP34.32■■■■□ 3.081e-6■■■■□ 20.7
LMBR1-209ENST00000434453 SAMD9LQ8IVG5 1584 aa34.32■■■■□ 3.08
LMBR1-209ENST00000434453 MRS2Q9HD23 443 aa34.31■■■■□ 3.08
LMBR1-209ENST00000434453 KIF15Q9NS87 1388 aa34.31■■■■□ 3.08
LMBR1-209ENST00000434453 PREX2Q70Z35 1606 aa34.31■■■■□ 3.08
LMBR1-209ENST00000434453 TSPY4P0CV99 314 aa34.3■■■■□ 3.08
LMBR1-209ENST00000434453 TSPY10P0CW01 314 aa34.3■■■■□ 3.08
LMBR1-209ENST00000434453 ZNF326Q5BKZ1 582 aaKnown RBP34.3■■■■□ 3.08
LMBR1-209ENST00000434453 DHX29Q7Z478 1369 aaKnown RBP34.3■■■■□ 3.08
LMBR1-209ENST00000434453 MYT1Q01538 1121 aa34.29■■■■□ 3.08
LMBR1-209ENST00000434453 ARHGEF12Q9NZN5 1544 aa34.27■■■■□ 3.08
LMBR1-209ENST00000434453 CHD1O14646 1710 aa34.27■■■■□ 3.08
LMBR1-209ENST00000434453 RALGAPBQ86X10 1494 aa34.27■■■■□ 3.08
LMBR1-209ENST00000434453 FAM9BQ8IZU0 186 aa34.27■■■■□ 3.08
LMBR1-209ENST00000434453 CCDC141Q6ZP82 1450 aa34.23■■■■□ 3.07
LMBR1-209ENST00000434453 ZBED9Q6R2W3 1325 aa34.18■■■■□ 3.06
LMBR1-209ENST00000434453 SHROOM2Q13796 1616 aa34.18■■■■□ 3.06
LMBR1-209ENST00000434453 IRX6P78412 446 aaPredicted RBP34.18■■■■□ 3.06
LMBR1-209ENST00000434453 ARID4BQ4LE39 1312 aaPredicted RBP34.17■■■■□ 3.06
LMBR1-209ENST00000434453 TTC37Q6PGP7 1564 aa34.16■■■■□ 3.06
LMBR1-209ENST00000434453 FAM135AQ9P2D6 1515 aa34.15■■■■□ 3.06
LMBR1-209ENST00000434453 SYCP2Q9BX26 1530 aa34.12■■■■□ 3.05
LMBR1-209ENST00000434453 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.1■■■■□ 3.051e-6■■■□□ 16.9
LMBR1-209ENST00000434453 CARD11Q9BXL7 1154 aa34.1■■■■□ 3.05
LMBR1-209ENST00000434453 POLR3GLQ9BT43 218 aa34.08■■■■□ 3.05
LMBR1-209ENST00000434453 MAST1Q9Y2H9 1570 aa34.08■■■■□ 3.05
LMBR1-209ENST00000434453 RSPH4AQ5TD94 716 aa34.08■■■■□ 3.05
LMBR1-209ENST00000434453 ERCC6L2Q5T890 1561 aa34.07■■■■□ 3.04
LMBR1-209ENST00000434453 KDM2AQ9Y2K7 1162 aa34.06■■■■□ 3.04
LMBR1-209ENST00000434453 RBM19Q9Y4C8 960 aaKnown RBP34.06■■■■□ 3.04
LMBR1-209ENST00000434453 UNC13BO14795 1591 aa34.04■■■■□ 3.04
LMBR1-209ENST00000434453 ARHGAP5Q13017 1502 aa34.04■■■■□ 3.04
LMBR1-209ENST00000434453 DCAF11Q8TEB1 546 aa34.04■■■■□ 3.04
LMBR1-209ENST00000434453 ROCK2O75116 1388 aaKnown RBP34.03■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms