RNA–Protein interactions for RNA: ENST00000433669.1

LINC00954-201, long intergenic non-protein coding RNA 954, humanhuman

TSL 2 BASIC

Gene LINC00954, Length 2,472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-201ENST00000433669 PPP1R15AO75807 674 aaPredicted RBP17.55■□□□□ 0.4
LINC00954-201ENST00000433669 GPATCH8Q9UKJ3 1502 aaKnown RBP17.54■□□□□ 0.4
LINC00954-201ENST00000433669 YTHDC1Q96MU7 727 aaKnown RBP17.54■□□□□ 0.4
LINC00954-201ENST00000433669 DNMT1P26358 1616 aaKnown RBP17.54■□□□□ 0.4
LINC00954-201ENST00000433669 CENPBP07199 599 aaPredicted RBP17.54■□□□□ 0.4
LINC00954-201ENST00000433669 ITSN2Q9NZM3 1697 aa17.53■□□□□ 0.4
LINC00954-201ENST00000433669 ADCY10Q96PN6 1610 aa17.52■□□□□ 0.4
LINC00954-201ENST00000433669 CAMSAP2Q08AD1 1489 aa17.52■□□□□ 0.39
LINC00954-201ENST00000433669 ROCK1Q13464 1354 aa17.51■□□□□ 0.39
LINC00954-201ENST00000433669 ACIN1Q9UKV3 1341 aaKnown RBP17.5■□□□□ 0.39
LINC00954-201ENST00000433669 MPHOSPH9Q99550 1183 aa17.5■□□□□ 0.39
LINC00954-201ENST00000433669 FOXD1Q16676 465 aa17.46■□□□□ 0.39
LINC00954-201ENST00000433669 HIRIP3Q9BW71 556 aaPredicted RBP17.46■□□□□ 0.39
LINC00954-201ENST00000433669 SCAF1Q9H7N4 1312 aaKnown RBP17.45■□□□□ 0.38
LINC00954-201ENST00000433669 SHROOM2Q13796 1616 aa17.45■□□□□ 0.38
LINC00954-201ENST00000433669 CDC42BPAQ5VT25 1732 aa17.45■□□□□ 0.38
LINC00954-201ENST00000433669 DENND4BO75064 1496 aaPredicted RBP17.44■□□□□ 0.38
LINC00954-201ENST00000433669 ERCC6L2Q5T890 1561 aa17.44■□□□□ 0.38
LINC00954-201ENST00000433669 ABCC10Q5T3U5 1492 aa17.43■□□□□ 0.38
LINC00954-201ENST00000433669 NCOA1Q15788 1441 aa17.42■□□□□ 0.38
LINC00954-201ENST00000433669 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
LINC00954-201ENST00000433669 ANKRD30AQ9BXX3 1397 aa17.39■□□□□ 0.37
LINC00954-201ENST00000433669 ADGBQ8N7X0 1667 aa17.39■□□□□ 0.37
LINC00954-201ENST00000433669 HNRNPMP52272 730 aaKnown RBP eCLIP17.39■□□□□ 0.37
LINC00954-201ENST00000433669 DDX10Q13206 875 aaKnown RBP17.39■□□□□ 0.37
LINC00954-201ENST00000433669 TSPY4P0CV99 314 aa17.38■□□□□ 0.37
LINC00954-201ENST00000433669 TSPY10P0CW01 314 aa17.38■□□□□ 0.37
LINC00954-201ENST00000433669 CROCC2H7BZ55 1655 aa17.37■□□□□ 0.37
LINC00954-201ENST00000433669 KCNH8Q96L42 1107 aa17.36■□□□□ 0.37
LINC00954-201ENST00000433669 ADGRL2O95490 1459 aa17.35■□□□□ 0.37
LINC00954-201ENST00000433669 ABCC2Q92887 1545 aa17.34■□□□□ 0.37
LINC00954-201ENST00000433669 C9orf84Q5VXU9 1444 aa17.34■□□□□ 0.37
LINC00954-201ENST00000433669 CLASP1Q7Z460 1538 aa17.33■□□□□ 0.37
LINC00954-201ENST00000433669 ANKRD30BQ9BXX2 1392 aa17.33■□□□□ 0.36
LINC00954-201ENST00000433669 L3MBTL2Q969R5 705 aa17.32■□□□□ 0.36
LINC00954-201ENST00000433669 KDM5BQ9UGL1 1544 aa17.32■□□□□ 0.36
LINC00954-201ENST00000433669 ANKRD50Q9ULJ7 1429 aa17.32■□□□□ 0.36
LINC00954-201ENST00000433669 CDC42BPBQ9Y5S2 1711 aa17.32■□□□□ 0.36
LINC00954-201ENST00000433669 GTF3C3Q9Y5Q9 886 aa17.29■□□□□ 0.36
LINC00954-201ENST00000433669 PZPP20742 1482 aa17.29■□□□□ 0.36
LINC00954-201ENST00000433669 PREX2Q70Z35 1606 aa17.29■□□□□ 0.36
LINC00954-201ENST00000433669 SHANK2Q9UPX8 1470 aa17.29■□□□□ 0.36
LINC00954-201ENST00000433669 PKD2Q13563 968 aa17.28■□□□□ 0.36
LINC00954-201ENST00000433669 TTC37Q6PGP7 1564 aa17.28■□□□□ 0.36
LINC00954-201ENST00000433669 SAMD9LQ8IVG5 1584 aa17.28■□□□□ 0.36
LINC00954-201ENST00000433669 ARHGAP5Q13017 1502 aa17.28■□□□□ 0.36
LINC00954-201ENST00000433669 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.28■□□□□ 0.36
LINC00954-201ENST00000433669 MBD5Q9P267 1494 aa17.27■□□□□ 0.36
LINC00954-201ENST00000433669 RPRD2Q5VT52 1461 aaKnown RBP17.27■□□□□ 0.36
LINC00954-201ENST00000433669 NUP155O75694 1391 aa17.26■□□□□ 0.35
LINC00954-201ENST00000433669 KIF15Q9NS87 1388 aa17.26■□□□□ 0.35
LINC00954-201ENST00000433669 RSPH4AQ5TD94 716 aa17.26■□□□□ 0.35
LINC00954-201ENST00000433669 ARHGEF5Q12774 1597 aa17.25■□□□□ 0.35
LINC00954-201ENST00000433669 CCDC141Q6ZP82 1450 aa17.25■□□□□ 0.35
LINC00954-201ENST00000433669 ZCCHC11Q5TAX3 1644 aaKnown RBP17.24■□□□□ 0.35
LINC00954-201ENST00000433669 SLC24A1O60721 1099 aa17.24■□□□□ 0.35
LINC00954-201ENST00000433669 KIAA1107Q9UPP5 1409 aa17.23■□□□□ 0.35
LINC00954-201ENST00000433669 SYCP2Q9BX26 1530 aa17.22■□□□□ 0.35
LINC00954-201ENST00000433669 HSPA5P11021 654 aaKnown RBP17.22■□□□□ 0.35
LINC00954-201ENST00000433669 MYO5CQ9NQX4 1742 aa17.22■□□□□ 0.35
LINC00954-201ENST00000433669 EIF4G2P78344 907 aaKnown RBP eCLIP17.21■□□□□ 0.35
LINC00954-201ENST00000433669 UHRF1BP1LA0JNW5 1464 aa17.21■□□□□ 0.35
LINC00954-201ENST00000433669 NBPF8Q3BBV2 869 aa17.2■□□□□ 0.34
LINC00954-201ENST00000433669 TEX14Q8IWB6 1497 aa17.18■□□□□ 0.34
LINC00954-201ENST00000433669 ANP32CO43423 234 aa17.18■□□□□ 0.34
LINC00954-201ENST00000433669 EFCAB2Q5VUJ9 269 aa17.17■□□□□ 0.34
LINC00954-201ENST00000433669 PLCH2O75038 1416 aa17.16■□□□□ 0.34
LINC00954-201ENST00000433669 ZNF326Q5BKZ1 582 aaKnown RBP17.15■□□□□ 0.34
LINC00954-201ENST00000433669 PLEKHH2Q8IVE3 1493 aa17.14■□□□□ 0.34
LINC00954-201ENST00000433669 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.14■□□□□ 0.33
LINC00954-201ENST00000433669 WASHC2AQ641Q2 1341 aa17.12■□□□□ 0.33
LINC00954-201ENST00000433669 OSCARQ8IYS5 282 aa17.12■□□□□ 0.33
LINC00954-201ENST00000433669 ARHGEF12Q9NZN5 1544 aa17.12■□□□□ 0.33
LINC00954-201ENST00000433669 KDM5DQ9BY66 1539 aa17.11■□□□□ 0.33
LINC00954-201ENST00000433669 MAST1Q9Y2H9 1570 aa17.1■□□□□ 0.33
LINC00954-201ENST00000433669 FAM135AQ9P2D6 1515 aa17.08■□□□□ 0.33
LINC00954-201ENST00000433669 WDR7Q9Y4E6 1490 aa17.07■□□□□ 0.32
LINC00954-201ENST00000433669 KDM2AQ9Y2K7 1162 aa17.07■□□□□ 0.32
LINC00954-201ENST00000433669 C11orf95C9JLR9 678 aaPredicted RBP17.06■□□□□ 0.32
LINC00954-201ENST00000433669 TRAPPC8Q9Y2L5 1435 aa17.06■□□□□ 0.32
LINC00954-201ENST00000433669 AFAP1Q8N556 730 aa17.06■□□□□ 0.32
LINC00954-201ENST00000433669 CCER2I3L3R5 266 aa17.05■□□□□ 0.32
LINC00954-201ENST00000433669 PLXNC1O60486 1568 aa17.05■□□□□ 0.32
LINC00954-201ENST00000433669 ABCC1P33527 1531 aa17.05■□□□□ 0.32
LINC00954-201ENST00000433669 DCAF11Q8TEB1 546 aa17.04■□□□□ 0.32
LINC00954-201ENST00000433669 DUOX2Q9NRD8 1548 aa17.03■□□□□ 0.32
LINC00954-201ENST00000433669 SPAG9O60271 1321 aaKnown RBP17.03■□□□□ 0.32
LINC00954-201ENST00000433669 NPM1P06748 294 aaKnown RBP eCLIP17.03■□□□□ 0.32
LINC00954-201ENST00000433669 MYT1LQ9UL68 1186 aa17.02■□□□□ 0.31
LINC00954-201ENST00000433669 CCDC7Q96M83 1385 aa17.02■□□□□ 0.31
LINC00954-201ENST00000433669 SPATA31E1Q6ZUB1 1445 aa17.01■□□□□ 0.31
LINC00954-201ENST00000433669 ASXL2Q76L83 1435 aa17.01■□□□□ 0.31
LINC00954-201ENST00000433669 UNC13BO14795 1591 aa17.01■□□□□ 0.31
LINC00954-201ENST00000433669 RGL3Q3MIN7 710 aa16.99■□□□□ 0.31
LINC00954-201ENST00000433669 CCDC144AA2RUR9 1427 aa16.99■□□□□ 0.31
LINC00954-201ENST00000433669 FANCAO15360 1455 aa16.99■□□□□ 0.31
LINC00954-201ENST00000433669 ERBINQ96RT1 1412 aa16.99■□□□□ 0.31
LINC00954-201ENST00000433669 ARAP3Q8WWN8 1544 aa16.98■□□□□ 0.31
LINC00954-201ENST00000433669 USP47Q96K76 1375 aa16.98■□□□□ 0.31
LINC00954-201ENST00000433669 KIF7Q2M1P5 1343 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms