RNA–Protein interactions for RNA: ENST00000433419.2

CCDC144CP-202, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

BASIC

Gene CCDC144CP, Length 5,227 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-202ENST00000433419 CSB-PGBD3P0DP91 1061 aa14.1□□□□□ -0.15
CCDC144CP-202ENST00000433419 RTF1Q92541 710 aaKnown RBP14.09□□□□□ -0.15
CCDC144CP-202ENST00000433419 CASC1Q6TDU7 716 aa14.08□□□□□ -0.15
CCDC144CP-202ENST00000433419 KANK4Q5T7N3 995 aaPredicted RBP14.07□□□□□ -0.16
CCDC144CP-202ENST00000433419 MPHOSPH9Q99550 1183 aa14.06□□□□□ -0.16
CCDC144CP-202ENST00000433419 GOLGA2Q08379 1002 aa14.06□□□□□ -0.16
CCDC144CP-202ENST00000433419 WIZO95785 1651 aa14.06□□□□□ -0.16
CCDC144CP-202ENST00000433419 SENP3-EIF4A1A0A087X0R7 540 aa14.06□□□□□ -0.16
CCDC144CP-202ENST00000433419 CDK11BP21127 795 aaKnown RBP14.06□□□□□ -0.16
CCDC144CP-202ENST00000433419 CHMP4AQ9BY43 222 aa14.06□□□□□ -0.16
CCDC144CP-202ENST00000433419 SMARCA4P51532 1647 aa14.06□□□□□ -0.16
CCDC144CP-202ENST00000433419 FHOD3Q2V2M9 1422 aa14.05□□□□□ -0.16
CCDC144CP-202ENST00000433419 OS9Q13438 667 aaPredicted RBP14.05□□□□□ -0.16
CCDC144CP-202ENST00000433419 EIF3AQ14152 1382 aaKnown RBP14.04□□□□□ -0.16
CCDC144CP-202ENST00000433419 NBR1Q14596 966 aa14.04□□□□□ -0.16
CCDC144CP-202ENST00000433419 CCDC9Q9Y3X0 531 aaKnown RBP14.04□□□□□ -0.16
CCDC144CP-202ENST00000433419 TERF2IPQ9NYB0 399 aa14.03□□□□□ -0.16
CCDC144CP-202ENST00000433419 AEBP2Q6ZN18 517 aaPredicted RBP14.02□□□□□ -0.16
CCDC144CP-202ENST00000433419 NGDNQ8NEJ9 315 aaKnown RBP14.02□□□□□ -0.16
CCDC144CP-202ENST00000433419 FRAT1Q92837 279 aaPredicted RBP14.02□□□□□ -0.17
CCDC144CP-202ENST00000433419 BECN1Q14457 450 aa14.01□□□□□ -0.17
CCDC144CP-202ENST00000433419 ROCK2O75116 1388 aaKnown RBP14.01□□□□□ -0.17
CCDC144CP-202ENST00000433419 SUPT16HQ9Y5B9 1047 aaKnown RBP14.01□□□□□ -0.17
CCDC144CP-202ENST00000433419 CALD1Q05682 793 aaKnown RBP14□□□□□ -0.17
CCDC144CP-202ENST00000433419 FAM69CQ0P6D2 419 aa14□□□□□ -0.17
CCDC144CP-202ENST00000433419 FOXD1Q16676 465 aa14□□□□□ -0.17
CCDC144CP-202ENST00000433419 NCLP19338 710 aaKnown RBP14□□□□□ -0.17
CCDC144CP-202ENST00000433419 GAPVD1Q14C86 1478 aa13.98□□□□□ -0.17
CCDC144CP-202ENST00000433419 NCAPD3P42695 1498 aa13.97□□□□□ -0.17
CCDC144CP-202ENST00000433419 VGFO15240 615 aaPredicted RBP13.97□□□□□ -0.17
CCDC144CP-202ENST00000433419 KTN1Q86UP2 1357 aaKnown RBP13.96□□□□□ -0.17
CCDC144CP-202ENST00000433419 TMX4Q9H1E5 349 aaPredicted RBP13.95□□□□□ -0.18
CCDC144CP-202ENST00000433419 HSPA5P11021 654 aaKnown RBP13.95□□□□□ -0.18
CCDC144CP-202ENST00000433419 U2AF1L5P0DN76 240 aaPredicted RBP13.95□□□□□ -0.18
CCDC144CP-202ENST00000433419 U2AF1Q01081 240 aaKnown RBP eCLIP13.95□□□□□ -0.18
CCDC144CP-202ENST00000433419 GOLGA6L22H0YM25 854 aa13.94□□□□□ -0.18
CCDC144CP-202ENST00000433419 UACAQ9BZF9 1416 aa13.93□□□□□ -0.18
CCDC144CP-202ENST00000433419 FGD1P98174 961 aa13.93□□□□□ -0.18
CCDC144CP-202ENST00000433419 RAB3GAP2Q9H2M9 1393 aa13.93□□□□□ -0.18
CCDC144CP-202ENST00000433419 ZRSR1Q15695 479 aaKnown RBP13.93□□□□□ -0.18
CCDC144CP-202ENST00000433419 DDRGK1Q96HY6 314 aa13.93□□□□□ -0.18
CCDC144CP-202ENST00000433419 NUTM2DQ5VT03 806 aaPredicted RBP13.92□□□□□ -0.18
CCDC144CP-202ENST00000433419 KCNJ4P48050 445 aa13.92□□□□□ -0.18
CCDC144CP-202ENST00000433419 IPO8O15397 1037 aaKnown RBP13.92□□□□□ -0.18
CCDC144CP-202ENST00000433419 AMPHP49418 695 aa13.91□□□□□ -0.18
CCDC144CP-202ENST00000433419 FGD5Q6ZNL6 1462 aa13.91□□□□□ -0.18
CCDC144CP-202ENST00000433419 ZNF330Q9Y3S2 320 aaPredicted RBP13.91□□□□□ -0.18
CCDC144CP-202ENST00000433419 HDAC5Q9UQL6 1122 aa13.9□□□□□ -0.18
CCDC144CP-202ENST00000433419 RALBP1Q15311 655 aa13.9□□□□□ -0.18
CCDC144CP-202ENST00000433419 CCDC144AA2RUR9 1427 aa13.89□□□□□ -0.19
CCDC144CP-202ENST00000433419 ANP32EQ9BTT0 268 aa13.88□□□□□ -0.19
CCDC144CP-202ENST00000433419 PPP4R2Q9NY27 417 aa13.88□□□□□ -0.19
CCDC144CP-202ENST00000433419 TRAK1Q9UPV9 953 aa13.88□□□□□ -0.19
CCDC144CP-202ENST00000433419 NUTM2FA1L443 756 aa13.87□□□□□ -0.19
CCDC144CP-202ENST00000433419 STK31Q9BXU1 1019 aa13.87□□□□□ -0.19
CCDC144CP-202ENST00000433419 IGF1RP08069 1367 aa13.87□□□□□ -0.19
CCDC144CP-202ENST00000433419 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.87□□□□□ -0.19
CCDC144CP-202ENST00000433419 L3MBTL2Q969R5 705 aa13.87□□□□□ -0.19
CCDC144CP-202ENST00000433419 CFAP44Q96MT7 982 aa13.85□□□□□ -0.19
CCDC144CP-202ENST00000433419 LMOD3Q0VAK6 560 aa13.85□□□□□ -0.19
CCDC144CP-202ENST00000433419 RAD54L2Q9Y4B4 1467 aa13.84□□□□□ -0.19
CCDC144CP-202ENST00000433419 CCER2I3L3R5 266 aa13.84□□□□□ -0.19
CCDC144CP-202ENST00000433419 AQRO60306 1485 aaKnown RBP eCLIP13.84□□□□□ -0.19
CCDC144CP-202ENST00000433419 RGS3P49796 1198 aa13.83□□□□□ -0.2
CCDC144CP-202ENST00000433419 GRIN2BQ13224 1484 aa13.83□□□□□ -0.2
CCDC144CP-202ENST00000433419 EVA1CP58658 441 aa13.82□□□□□ -0.2
CCDC144CP-202ENST00000433419 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.82□□□□□ -0.2
CCDC144CP-202ENST00000433419 LTV1Q96GA3 475 aaPredicted RBP13.82□□□□□ -0.2
CCDC144CP-202ENST00000433419 EVC2Q86UK5 1308 aa13.81□□□□□ -0.2
CCDC144CP-202ENST00000433419 NAP1L2Q9ULW6 460 aaPredicted RBP13.8□□□□□ -0.2
CCDC144CP-202ENST00000433419 GTF2E1P29083 439 aaPredicted RBP13.8□□□□□ -0.2
CCDC144CP-202ENST00000433419 COG3Q96JB2 828 aa13.79□□□□□ -0.2
CCDC144CP-202ENST00000433419 MCCP23508 829 aa13.79□□□□□ -0.2
CCDC144CP-202ENST00000433419 STAC3Q96MF2 364 aa13.79□□□□□ -0.2
CCDC144CP-202ENST00000433419 MYOM3Q5VTT5 1437 aa13.79□□□□□ -0.2
CCDC144CP-202ENST00000433419 ISY1Q9ULR0 285 aaKnown RBP13.79□□□□□ -0.2
CCDC144CP-202ENST00000433419 TAF7LQ5H9L4 462 aa13.78□□□□□ -0.2
CCDC144CP-202ENST00000433419 B4GALNT3Q6L9W6 998 aa13.78□□□□□ -0.2
CCDC144CP-202ENST00000433419 GORABQ5T7V8 394 aa13.77□□□□□ -0.21
CCDC144CP-202ENST00000433419 MRC2Q9UBG0 1479 aa13.77□□□□□ -0.21
CCDC144CP-202ENST00000433419 ATF3P18847 181 aa13.77□□□□□ -0.21
CCDC144CP-202ENST00000433419 G3V3G9 751 aa13.76□□□□□ -0.21
CCDC144CP-202ENST00000433419 TULP1O00294 542 aaPredicted RBP13.76□□□□□ -0.21
CCDC144CP-202ENST00000433419 DCAF8Q5TAQ9 597 aa13.76□□□□□ -0.21
CCDC144CP-202ENST00000433419 NLRP13Q86W25 1043 aa13.76□□□□□ -0.21
CCDC144CP-202ENST00000433419 PSME1Q06323 249 aa13.76□□□□□ -0.21
CCDC144CP-202ENST00000433419 MEX3CQ5U5Q3 659 aaKnown RBP13.75□□□□□ -0.21
CCDC144CP-202ENST00000433419 TAOK2Q9UL54 1235 aa13.75□□□□□ -0.21
CCDC144CP-202ENST00000433419 KIAA1211Q6ZU35 1233 aa13.75□□□□□ -0.21
CCDC144CP-202ENST00000433419 C1orf141Q5JVX7 400 aa13.75□□□□□ -0.21
CCDC144CP-202ENST00000433419 CGNL1Q0VF96 1302 aa13.74□□□□□ -0.21
CCDC144CP-202ENST00000433419 IFT140Q96RY7 1462 aa13.74□□□□□ -0.21
CCDC144CP-202ENST00000433419 MINK1Q8N4C8 1332 aaPredicted RBP13.74□□□□□ -0.21
CCDC144CP-202ENST00000433419 CHMP3Q9Y3E7 222 aa13.74□□□□□ -0.21
CCDC144CP-202ENST00000433419 HMMRO75330 724 aa13.73□□□□□ -0.21
CCDC144CP-202ENST00000433419 PRG4Q92954 1404 aaPredicted RBP13.73□□□□□ -0.21
CCDC144CP-202ENST00000433419 ST20-MTHFSA0A0A6YYL1 179 aa13.72□□□□□ -0.21
CCDC144CP-202ENST00000433419 KIF15Q9NS87 1388 aa13.72□□□□□ -0.21
CCDC144CP-202ENST00000433419 RUSC2Q8N2Y8 1516 aa13.72□□□□□ -0.21
CCDC144CP-202ENST00000433419 PHLDB1Q86UU1 1377 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms