RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 FOXD1Q16676 465 aa21.08■□□□□ 0.96
RFTN1-203ENST00000432519 AKNAQ7Z591 1439 aa21.07■□□□□ 0.96
RFTN1-203ENST00000432519 GPATCH8Q9UKJ3 1502 aaKnown RBP21.05■□□□□ 0.96
RFTN1-203ENST00000432519 DNMT1P26358 1616 aaKnown RBP21.05■□□□□ 0.96
RFTN1-203ENST00000432519 ZNF777Q9ULD5 760 aaPredicted RBP21.05■□□□□ 0.96
RFTN1-203ENST00000432519 ABCA8O94911 1581 aa21.04■□□□□ 0.96
RFTN1-203ENST00000432519 CFDP1Q9UEE9 299 aaPredicted RBP21.04■□□□□ 0.96
RFTN1-203ENST00000432519 KDM5BQ9UGL1 1544 aa21.03■□□□□ 0.96
RFTN1-203ENST00000432519 ATP10BO94823 1461 aa21.03■□□□□ 0.96
RFTN1-203ENST00000432519 MPHOSPH9Q99550 1183 aa21.02■□□□□ 0.96
RFTN1-203ENST00000432519 CAMSAP2Q08AD1 1489 aa21.02■□□□□ 0.95
RFTN1-203ENST00000432519 DDX10Q13206 875 aaKnown RBP21.01■□□□□ 0.95
RFTN1-203ENST00000432519 CHD1O14646 1710 aa21.01■□□□□ 0.95
RFTN1-203ENST00000432519 KCNH8Q96L42 1107 aa20.99■□□□□ 0.95
RFTN1-203ENST00000432519 ROCK1Q13464 1354 aa20.98■□□□□ 0.95
RFTN1-203ENST00000432519 ADCY10Q96PN6 1610 aa20.98■□□□□ 0.95
RFTN1-203ENST00000432519 PLEKHD1A6NEE1 506 aa20.97■□□□□ 0.95
RFTN1-203ENST00000432519 PTPRGP23470 1445 aa20.96■□□□□ 0.95
RFTN1-203ENST00000432519 ITSN2Q9NZM3 1697 aa20.94■□□□□ 0.94
RFTN1-203ENST00000432519 ABCC10Q5T3U5 1492 aa20.93■□□□□ 0.94
RFTN1-203ENST00000432519 ERCC6L2Q5T890 1561 aa20.92■□□□□ 0.94
RFTN1-203ENST00000432519 CDC42BPAQ5VT25 1732 aa20.92■□□□□ 0.94
RFTN1-203ENST00000432519 NCOA1Q15788 1441 aa20.92■□□□□ 0.94
RFTN1-203ENST00000432519 L3MBTL2Q969R5 705 aa20.88■□□□□ 0.93
RFTN1-203ENST00000432519 SLC4A1APQ9BWU0 796 aaKnown RBP20.88■□□□□ 0.93
RFTN1-203ENST00000432519 ANKRD30BQ9BXX2 1392 aa20.87■□□□□ 0.93
RFTN1-203ENST00000432519 CROCC2H7BZ55 1655 aa20.85■□□□□ 0.93
RFTN1-203ENST00000432519 PZPP20742 1482 aa20.84■□□□□ 0.93
RFTN1-203ENST00000432519 SHROOM2Q13796 1616 aa20.83■□□□□ 0.93
RFTN1-203ENST00000432519 HNRNPMP52272 730 aaKnown RBP eCLIP20.83■□□□□ 0.92
RFTN1-203ENST00000432519 ADGBQ8N7X0 1667 aa20.82■□□□□ 0.92
RFTN1-203ENST00000432519 ADGRL2O95490 1459 aa20.82■□□□□ 0.92
RFTN1-203ENST00000432519 RPRD2Q5VT52 1461 aaKnown RBP20.79■□□□□ 0.92
RFTN1-203ENST00000432519 ANKRD30AQ9BXX3 1397 aa20.78■□□□□ 0.92
RFTN1-203ENST00000432519 NBPF8Q3BBV2 869 aa20.78■□□□□ 0.92
RFTN1-203ENST00000432519 C9orf84Q5VXU9 1444 aa20.77■□□□□ 0.92
RFTN1-203ENST00000432519 HSPA5P11021 654 aaKnown RBP20.77■□□□□ 0.92
RFTN1-203ENST00000432519 ANKRD50Q9ULJ7 1429 aa20.77■□□□□ 0.92
RFTN1-203ENST00000432519 CDC42BPBQ9Y5S2 1711 aa20.76■□□□□ 0.91
RFTN1-203ENST00000432519 TEX14Q8IWB6 1497 aa20.76■□□□□ 0.91
RFTN1-203ENST00000432519 MBD5Q9P267 1494 aa20.75■□□□□ 0.91
RFTN1-203ENST00000432519 SAMD9LQ8IVG5 1584 aa20.74■□□□□ 0.91
RFTN1-203ENST00000432519 PKD2Q13563 968 aa20.73■□□□□ 0.91
RFTN1-203ENST00000432519 TTC37Q6PGP7 1564 aa20.72■□□□□ 0.91
RFTN1-203ENST00000432519 WASHC2AQ641Q2 1341 aa20.72■□□□□ 0.91
RFTN1-203ENST00000432519 TSPY4P0CV99 314 aa20.71■□□□□ 0.91
RFTN1-203ENST00000432519 TSPY10P0CW01 314 aa20.71■□□□□ 0.91
RFTN1-203ENST00000432519 SHANK2Q9UPX8 1470 aa20.7■□□□□ 0.9
RFTN1-203ENST00000432519 PREX2Q70Z35 1606 aa20.7■□□□□ 0.9
RFTN1-203ENST00000432519 ABCC2Q92887 1545 aa20.69■□□□□ 0.9
RFTN1-203ENST00000432519 C11orf95C9JLR9 678 aaPredicted RBP20.69■□□□□ 0.9
RFTN1-203ENST00000432519 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.69■□□□□ 0.9
RFTN1-203ENST00000432519 CLASP1Q7Z460 1538 aa20.69■□□□□ 0.9
RFTN1-203ENST00000432519 KIAA1107Q9UPP5 1409 aa20.68■□□□□ 0.9
RFTN1-203ENST00000432519 NUP155O75694 1391 aa20.68■□□□□ 0.9
RFTN1-203ENST00000432519 KIF15Q9NS87 1388 aa20.68■□□□□ 0.9
RFTN1-203ENST00000432519 EIF4G2P78344 907 aaKnown RBP eCLIP20.67■□□□□ 0.9
RFTN1-203ENST00000432519 ARHGEF5Q12774 1597 aa20.65■□□□□ 0.9
RFTN1-203ENST00000432519 ANP32CO43423 234 aa20.65■□□□□ 0.9
RFTN1-203ENST00000432519 SYCP2Q9BX26 1530 aa20.65■□□□□ 0.9
RFTN1-203ENST00000432519 CCDC141Q6ZP82 1450 aa20.63■□□□□ 0.89
RFTN1-203ENST00000432519 ARHGAP5Q13017 1502 aa20.63■□□□□ 0.89
RFTN1-203ENST00000432519 ZNF326Q5BKZ1 582 aaKnown RBP20.6■□□□□ 0.89
RFTN1-203ENST00000432519 ZCCHC11Q5TAX3 1644 aaKnown RBP20.59■□□□□ 0.89
RFTN1-203ENST00000432519 ARHGEF12Q9NZN5 1544 aa20.58■□□□□ 0.88
RFTN1-203ENST00000432519 SPATA31E1Q6ZUB1 1445 aa20.57■□□□□ 0.88
RFTN1-203ENST00000432519 CCER2I3L3R5 266 aa20.57■□□□□ 0.88
RFTN1-203ENST00000432519 MYO5CQ9NQX4 1742 aa20.55■□□□□ 0.88
RFTN1-203ENST00000432519 KDM5DQ9BY66 1539 aa20.55■□□□□ 0.88
RFTN1-203ENST00000432519 CCDC7Q96M83 1385 aa20.53■□□□□ 0.88
RFTN1-203ENST00000432519 RSPH4AQ5TD94 716 aa20.51■□□□□ 0.87
RFTN1-203ENST00000432519 UHRF1BP1LA0JNW5 1464 aa20.51■□□□□ 0.87
RFTN1-203ENST00000432519 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.51■□□□□ 0.87
RFTN1-203ENST00000432519 FAM135AQ9P2D6 1515 aa20.5■□□□□ 0.87
RFTN1-203ENST00000432519 PLCH2O75038 1416 aa20.5■□□□□ 0.87
RFTN1-203ENST00000432519 KIF7Q2M1P5 1343 aa20.49■□□□□ 0.87
RFTN1-203ENST00000432519 PLEKHH2Q8IVE3 1493 aa20.49■□□□□ 0.87
RFTN1-203ENST00000432519 KDM2AQ9Y2K7 1162 aa20.48■□□□□ 0.87
RFTN1-203ENST00000432519 CNTLNQ9NXG0 1405 aa20.47■□□□□ 0.87
RFTN1-203ENST00000432519 CCDC184Q52MB2 194 aa20.47■□□□□ 0.87
RFTN1-203ENST00000432519 MAST1Q9Y2H9 1570 aa20.47■□□□□ 0.87
RFTN1-203ENST00000432519 SUPT16HQ9Y5B9 1047 aaKnown RBP20.46■□□□□ 0.87
RFTN1-203ENST00000432519 TRAPPC8Q9Y2L5 1435 aa20.46■□□□□ 0.87
RFTN1-203ENST00000432519 USP47Q96K76 1375 aa20.44■□□□□ 0.86
RFTN1-203ENST00000432519 EFCAB2Q5VUJ9 269 aa20.44■□□□□ 0.86
RFTN1-203ENST00000432519 BCORL1Q5H9F3 1711 aa20.44■□□□□ 0.86
RFTN1-203ENST00000432519 DCAF11Q8TEB1 546 aa20.43■□□□□ 0.86
RFTN1-203ENST00000432519 PLA2R1Q13018 1463 aa20.43■□□□□ 0.86
RFTN1-203ENST00000432519 AFAP1Q8N556 730 aa20.42■□□□□ 0.86
RFTN1-203ENST00000432519 PLXNC1O60486 1568 aa20.41■□□□□ 0.86
RFTN1-203ENST00000432519 ABCC1P33527 1531 aa20.41■□□□□ 0.86
RFTN1-203ENST00000432519 UNC13BO14795 1591 aa20.4■□□□□ 0.86
RFTN1-203ENST00000432519 UHRF1BP1Q6BDS2 1440 aa20.4■□□□□ 0.86
RFTN1-203ENST00000432519 KDM5CP41229 1560 aa20.39■□□□□ 0.85
RFTN1-203ENST00000432519 RGL3Q3MIN7 710 aa20.39■□□□□ 0.85
RFTN1-203ENST00000432519 POLR3GLQ9BT43 218 aa20.39■□□□□ 0.85
RFTN1-203ENST00000432519 PRKRIP1Q9H875 184 aaPredicted RBP20.38■□□□□ 0.85
RFTN1-203ENST00000432519 POLR1AO95602 1720 aaPredicted RBP20.37■□□□□ 0.85
RFTN1-203ENST00000432519 RALGAPBQ86X10 1494 aa20.37■□□□□ 0.85
RFTN1-203ENST00000432519 CARD11Q9BXL7 1154 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms