RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 UHRF1BP1LA0JNW5 1464 aa6.8□□□□□ -1.32
UBE4A-202ENST00000431736 A0A0G2JS52 829 aa6.79□□□□□ -1.32
UBE4A-202ENST00000431736 MYT1Q01538 1121 aa6.79□□□□□ -1.32
UBE4A-202ENST00000431736 CERKQ8TCT0 537 aa6.78□□□□□ -1.32
UBE4A-202ENST00000431736 EPRSP07814 1512 aaKnown RBP6.78□□□□□ -1.32
UBE4A-202ENST00000431736 PLEKHH2Q8IVE3 1493 aa6.78□□□□□ -1.32
UBE4A-202ENST00000431736 HNRNPMP52272 730 aaKnown RBP eCLIP6.77□□□□□ -1.33
UBE4A-202ENST00000431736 NEO1Q92859 1461 aa6.77□□□□□ -1.33
UBE4A-202ENST00000431736 PKD2Q13563 968 aa6.77□□□□□ -1.33
UBE4A-202ENST00000431736 RUSC2Q8N2Y8 1516 aa6.76□□□□□ -1.33
UBE4A-202ENST00000431736 CNTLNQ9NXG0 1405 aa6.76□□□□□ -1.33
UBE4A-202ENST00000431736 LMTK3Q96Q04 1460 aa6.75□□□□□ -1.33
UBE4A-202ENST00000431736 UGGT2Q9NYU1 1516 aa6.75□□□□□ -1.33
UBE4A-202ENST00000431736 AFAP1Q8N556 730 aa6.75□□□□□ -1.33
UBE4A-202ENST00000431736 EFCAB5A4FU69 1503 aa6.75□□□□□ -1.33
UBE4A-202ENST00000431736 ATF3P18847 181 aa6.74□□□□□ -1.33
UBE4A-202ENST00000431736 KDM4FA0A1W2PPD8 638 aa6.74□□□□□ -1.33
UBE4A-202ENST00000431736 CEBPAP49715 358 aaPredicted RBP6.74□□□□□ -1.33
UBE4A-202ENST00000431736 SF3B2Q13435 895 aaKnown RBP6.73□□□□□ -1.33
UBE4A-202ENST00000431736 KIAA0556O60303 1618 aa6.73□□□□□ -1.33
UBE4A-202ENST00000431736 ERCC6L2Q5T890 1561 aa6.73□□□□□ -1.33
UBE4A-202ENST00000431736 CHIC2Q9UKJ5 165 aa6.73□□□□□ -1.33
UBE4A-202ENST00000431736 CFAP74Q9C0B2 1584 aa6.73□□□□□ -1.33
UBE4A-202ENST00000431736 PROSER2Q86WR7 435 aaPredicted RBP6.73□□□□□ -1.33
UBE4A-202ENST00000431736 C9orf84Q5VXU9 1444 aa6.72□□□□□ -1.33
UBE4A-202ENST00000431736 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.72□□□□□ -1.33
UBE4A-202ENST00000431736 KDM5BQ9UGL1 1544 aa6.72□□□□□ -1.33
UBE4A-202ENST00000431736 TROQ12816 1431 aaPredicted RBP6.72□□□□□ -1.33
UBE4A-202ENST00000431736 HECW1Q76N89 1606 aa6.72□□□□□ -1.33
UBE4A-202ENST00000431736 MAGI3Q5TCQ9 1506 aa6.72□□□□□ -1.33
UBE4A-202ENST00000431736 SLC4A1APQ9BWU0 796 aaKnown RBP6.71□□□□□ -1.33
UBE4A-202ENST00000431736 CEP162Q5TB80 1403 aa6.71□□□□□ -1.34
UBE4A-202ENST00000431736 CCDC9Q9Y3X0 531 aaKnown RBP6.71□□□□□ -1.34
UBE4A-202ENST00000431736 ATP10AO60312 1499 aa6.71□□□□□ -1.34
UBE4A-202ENST00000431736 ZFYVE16Q7Z3T8 1539 aa6.71□□□□□ -1.34
UBE4A-202ENST00000431736 DIP2BQ9P265 1576 aa6.71□□□□□ -1.34
UBE4A-202ENST00000431736 ZNF518AQ6AHZ1 1483 aa6.71□□□□□ -1.34
UBE4A-202ENST00000431736 TXNDC2Q86VQ3 553 aa6.7□□□□□ -1.34
UBE4A-202ENST00000431736 LMOD2Q6P5Q4 547 aa6.7□□□□□ -1.34
UBE4A-202ENST00000431736 KIF14Q15058 1648 aa6.69□□□□□ -1.34
UBE4A-202ENST00000431736 ACIN1Q9UKV3 1341 aaKnown RBP6.69□□□□□ -1.34
UBE4A-202ENST00000431736 ATP10BO94823 1461 aa6.69□□□□□ -1.34
UBE4A-202ENST00000431736 MAGI2Q86UL8 1455 aa6.69□□□□□ -1.34
UBE4A-202ENST00000431736 RRP7BPQ9NSQ0 103 aa6.68□□□□□ -1.34
UBE4A-202ENST00000431736 GLI2P10070 1586 aa6.68□□□□□ -1.34
UBE4A-202ENST00000431736 ANKRD30AQ9BXX3 1397 aa6.68□□□□□ -1.34
UBE4A-202ENST00000431736 RAPGEF6Q8TEU7 1601 aa6.68□□□□□ -1.34
UBE4A-202ENST00000431736 PLCH2O75038 1416 aa6.68□□□□□ -1.34
UBE4A-202ENST00000431736 ADCY10Q96PN6 1610 aa6.67□□□□□ -1.34
UBE4A-202ENST00000431736 FAM135AQ9P2D6 1515 aa6.67□□□□□ -1.34
UBE4A-202ENST00000431736 PRXQ9BXM0 1461 aa6.67□□□□□ -1.34
UBE4A-202ENST00000431736 SHROOM2Q13796 1616 aa6.67□□□□□ -1.34
UBE4A-202ENST00000431736 TNRQ92752 1358 aa6.66□□□□□ -1.34
UBE4A-202ENST00000431736 DISP1Q96F81 1524 aa6.66□□□□□ -1.34
UBE4A-202ENST00000431736 ZCCHC11Q5TAX3 1644 aaKnown RBP6.66□□□□□ -1.34
UBE4A-202ENST00000431736 PLEKHG5O94827 1062 aa6.66□□□□□ -1.34
UBE4A-202ENST00000431736 NCKAP5LQ9HCH0 1330 aa6.65□□□□□ -1.34
UBE4A-202ENST00000431736 YEATS2Q9ULM3 1422 aa6.65□□□□□ -1.34
UBE4A-202ENST00000431736 CFAP43Q8NDM7 1665 aa6.65□□□□□ -1.35
UBE4A-202ENST00000431736 PTPRMP28827 1452 aa6.65□□□□□ -1.35
UBE4A-202ENST00000431736 CTTNBP2Q8WZ74 1663 aa6.65□□□□□ -1.35
UBE4A-202ENST00000431736 NUTM2BA6NNL0 878 aaPredicted RBP6.64□□□□□ -1.35
UBE4A-202ENST00000431736 NUTM2EB1AL46 878 aaPredicted RBP6.64□□□□□ -1.35
UBE4A-202ENST00000431736 NUTM2AQ8IVF1 878 aaPredicted RBP6.64□□□□□ -1.35
UBE4A-202ENST00000431736 TRAPPC8Q9Y2L5 1435 aa6.64□□□□□ -1.35
UBE4A-202ENST00000431736 NUTM2DQ5VT03 806 aaPredicted RBP6.64□□□□□ -1.35
UBE4A-202ENST00000431736 CASKIN1Q8WXD9 1431 aa6.63□□□□□ -1.35
UBE4A-202ENST00000431736 MSH6P52701 1360 aa6.63□□□□□ -1.35
UBE4A-202ENST00000431736 POGKQ9P215 609 aa6.63□□□□□ -1.35
UBE4A-202ENST00000431736 ARAP3Q8WWN8 1544 aa6.62□□□□□ -1.35
UBE4A-202ENST00000431736 ARHGAP35Q9NRY4 1499 aa6.62□□□□□ -1.35
UBE4A-202ENST00000431736 LOC105371045A0A1W2PR82 267 aa6.61□□□□□ -1.35
UBE4A-202ENST00000431736 ZMYM3Q14202 1370 aa6.61□□□□□ -1.35
UBE4A-202ENST00000431736 ZBTB7CA1YPR0 619 aa6.61□□□□□ -1.35
UBE4A-202ENST00000431736 NGLY1Q96IV0 654 aa6.61□□□□□ -1.35
UBE4A-202ENST00000431736 CDK13Q14004 1512 aaKnown RBP6.61□□□□□ -1.35
UBE4A-202ENST00000431736 PTPRKQ15262 1439 aa6.61□□□□□ -1.35
UBE4A-202ENST00000431736 SLC52A1Q9NWF4 448 aa6.6□□□□□ -1.35
UBE4A-202ENST00000431736 PPARGC1BQ86YN6 1023 aaKnown RBP6.6□□□□□ -1.35
UBE4A-202ENST00000431736 FYCO1Q9BQS8 1478 aa6.6□□□□□ -1.35
UBE4A-202ENST00000431736 KIF21BO75037 1637 aa6.6□□□□□ -1.35
UBE4A-202ENST00000431736 CADPS2Q86UW7 1296 aa6.59□□□□□ -1.35
UBE4A-202ENST00000431736 ABCA8O94911 1581 aa6.59□□□□□ -1.35
UBE4A-202ENST00000431736 A2MP01023 1474 aa6.59□□□□□ -1.35
UBE4A-202ENST00000431736 MYOM3Q5VTT5 1437 aa6.59□□□□□ -1.36
UBE4A-202ENST00000431736 NUP153P49790 1475 aaKnown RBP6.59□□□□□ -1.36
UBE4A-202ENST00000431736 ZNF772Q68DY9 489 aaPredicted RBP6.58□□□□□ -1.36
UBE4A-202ENST00000431736 HECW2Q9P2P5 1572 aa6.58□□□□□ -1.36
UBE4A-202ENST00000431736 VGFO15240 615 aaPredicted RBP6.57□□□□□ -1.36
UBE4A-202ENST00000431736 DHX29Q7Z478 1369 aaKnown RBP6.56□□□□□ -1.36
UBE4A-202ENST00000431736 CCDC141Q6ZP82 1450 aa6.56□□□□□ -1.36
UBE4A-202ENST00000431736 KIF15Q9NS87 1388 aa6.56□□□□□ -1.36
UBE4A-202ENST00000431736 PSME1Q06323 249 aa6.56□□□□□ -1.36
UBE4A-202ENST00000431736 EHBP1L1Q8N3D4 1523 aa6.56□□□□□ -1.36
UBE4A-202ENST00000431736 PCF11O94913 1555 aaKnown RBP6.56□□□□□ -1.36
UBE4A-202ENST00000431736 SLC26A8Q96RN1 970 aa6.55□□□□□ -1.36
UBE4A-202ENST00000431736 SOCS7O14512 581 aa6.55□□□□□ -1.36
UBE4A-202ENST00000431736 RIMS1Q86UR5 1692 aaKnown RBP6.55□□□□□ -1.36
UBE4A-202ENST00000431736 NUP155O75694 1391 aa6.54□□□□□ -1.36
UBE4A-202ENST00000431736 ZNF335Q9H4Z2 1342 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms