RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 TMF1P82094 1093 aa14.87□□□□□ -0.03
RIMKLA-202ENST00000431473 CCER2I3L3R5 266 aa14.86□□□□□ -0.03
RIMKLA-202ENST00000431473 TSHZ2Q9NRE2 1034 aa14.86□□□□□ -0.03
RIMKLA-202ENST00000431473 EIF4G1Q04637 1599 aaKnown RBP14.85□□□□□ -0.03
RIMKLA-202ENST00000431473 RCAN3Q9UKA8 241 aa14.85□□□□□ -0.03
RIMKLA-202ENST00000431473 KIF27Q86VH2 1401 aa14.84□□□□□ -0.03
RIMKLA-202ENST00000431473 GOLGA6L3A6NEY3 463 aa14.83□□□□□ -0.04
RIMKLA-202ENST00000431473 ITPRIPQ8IWB1 547 aa14.82□□□□□ -0.04
RIMKLA-202ENST00000431473 IPO9Q96P70 1041 aaKnown RBP14.82□□□□□ -0.04
RIMKLA-202ENST00000431473 RB1CC1Q8TDY2 1594 aa14.82□□□□□ -0.04
RIMKLA-202ENST00000431473 HSPA5P11021 654 aaKnown RBP14.82□□□□□ -0.04
RIMKLA-202ENST00000431473 FOXD1Q16676 465 aa14.82□□□□□ -0.04
RIMKLA-202ENST00000431473 KTN1Q86UP2 1357 aaKnown RBP14.82□□□□□ -0.04
RIMKLA-202ENST00000431473 SAFB2Q14151 953 aaKnown RBP eCLIP14.82□□□□□ -0.04
RIMKLA-202ENST00000431473 KIAA1211Q6ZU35 1233 aa14.81□□□□□ -0.04
RIMKLA-202ENST00000431473 MORC1Q86VD1 984 aa14.81□□□□□ -0.04
RIMKLA-202ENST00000431473 MFAP1P55081 439 aaKnown RBP14.81□□□□□ -0.04
RIMKLA-202ENST00000431473 PTMSP20962 102 aa14.81□□□□□ -0.04
RIMKLA-202ENST00000431473 NOC3LQ8WTT2 800 aaKnown RBP14.8□□□□□ -0.04
RIMKLA-202ENST00000431473 TNNT3P45378 269 aaPredicted RBP14.8□□□□□ -0.04
RIMKLA-202ENST00000431473 SRPK2P78362 688 aaKnown RBP14.8□□□□□ -0.04
RIMKLA-202ENST00000431473 FOXD4L1Q9NU39 408 aa14.79□□□□□ -0.04
RIMKLA-202ENST00000431473 BAZ1BQ9UIG0 1483 aaKnown RBP14.78□□□□□ -0.04
RIMKLA-202ENST00000431473 TCERG1O14776 1098 aaKnown RBP14.78□□□□□ -0.04
RIMKLA-202ENST00000431473 SETD5Q9C0A6 1442 aa14.78□□□□□ -0.04
RIMKLA-202ENST00000431473 SYAP1Q96A49 352 aaPredicted RBP14.77□□□□□ -0.04
RIMKLA-202ENST00000431473 ARHGAP35Q9NRY4 1499 aa14.77□□□□□ -0.05
RIMKLA-202ENST00000431473 ISY1Q9ULR0 285 aaKnown RBP14.76□□□□□ -0.05
RIMKLA-202ENST00000431473 CFAP44Q96MT7 982 aa14.76□□□□□ -0.05
RIMKLA-202ENST00000431473 ROCK2O75116 1388 aaKnown RBP14.75□□□□□ -0.05
RIMKLA-202ENST00000431473 RTF1Q92541 710 aaKnown RBP14.74□□□□□ -0.05
RIMKLA-202ENST00000431473 HSP90AA2PQ14568 343 aaPredicted RBP14.74□□□□□ -0.05
RIMKLA-202ENST00000431473 FHAD1B1AJZ9 1412 aa14.74□□□□□ -0.05
RIMKLA-202ENST00000431473 IPO8O15397 1037 aaKnown RBP14.74□□□□□ -0.05
RIMKLA-202ENST00000431473 RWDD1Q9H446 243 aaPredicted RBP14.74□□□□□ -0.05
RIMKLA-202ENST00000431473 NOL8Q76FK4 1167 aaKnown RBP14.74□□□□□ -0.05
RIMKLA-202ENST00000431473 ABCC8Q09428 1581 aa14.74□□□□□ -0.05
RIMKLA-202ENST00000431473 HSP90B1P14625 803 aaKnown RBP14.73□□□□□ -0.05
RIMKLA-202ENST00000431473 TRIM6-TRIM34B2RNG4 842 aa14.72□□□□□ -0.05
RIMKLA-202ENST00000431473 FOXD4L5Q5VV16 416 aaPredicted RBP14.72□□□□□ -0.05
RIMKLA-202ENST00000431473 FOXD4L4Q8WXT5 416 aaPredicted RBP14.72□□□□□ -0.05
RIMKLA-202ENST00000431473 KANK1Q14678 1352 aa14.7□□□□□ -0.06
RIMKLA-202ENST00000431473 CALD1Q05682 793 aaKnown RBP14.7□□□□□ -0.06
RIMKLA-202ENST00000431473 STK26Q9P289 416 aa14.7□□□□□ -0.06
RIMKLA-202ENST00000431473 GOLGA6L1Q8N7Z2 621 aa14.69□□□□□ -0.06
RIMKLA-202ENST00000431473 PMFBP1Q8TBY8 1022 aa14.69□□□□□ -0.06
RIMKLA-202ENST00000431473 U2AF1L5P0DN76 240 aaPredicted RBP14.69□□□□□ -0.06
RIMKLA-202ENST00000431473 U2AF1Q01081 240 aaKnown RBP eCLIP14.69□□□□□ -0.06
RIMKLA-202ENST00000431473 CCDC146Q8IYE0 955 aa14.69□□□□□ -0.06
RIMKLA-202ENST00000431473 CREBRFQ8IUR6 639 aa14.68□□□□□ -0.06
RIMKLA-202ENST00000431473 TPM4P67936 248 aa14.68□□□□□ -0.06
RIMKLA-202ENST00000431473 RAB3GAP2Q9H2M9 1393 aa14.67□□□□□ -0.06
RIMKLA-202ENST00000431473 PDE4CQ08493 712 aa14.67□□□□□ -0.06
RIMKLA-202ENST00000431473 SMC4Q9NTJ3 1288 aa14.67□□□□□ -0.06
RIMKLA-202ENST00000431473 SOGA1O94964 1423 aa14.67□□□□□ -0.06
RIMKLA-202ENST00000431473 A0A0U1RQG5 324 aaPredicted RBP14.66□□□□□ -0.06
RIMKLA-202ENST00000431473 SLC4A3P48751 1232 aa14.66□□□□□ -0.06
RIMKLA-202ENST00000431473 RALBP1Q15311 655 aa14.66□□□□□ -0.06
RIMKLA-202ENST00000431473 CLUAP1Q96AJ1 413 aa14.66□□□□□ -0.06
RIMKLA-202ENST00000431473 HTATSF1O43719 755 aaKnown RBP14.65□□□□□ -0.06
RIMKLA-202ENST00000431473 PHF14O94880 888 aa14.65□□□□□ -0.06
RIMKLA-202ENST00000431473 RSPH6AQ9H0K4 717 aa14.65□□□□□ -0.06
RIMKLA-202ENST00000431473 PKD2Q13563 968 aa14.64□□□□□ -0.07
RIMKLA-202ENST00000431473 ZNF330Q9Y3S2 320 aaPredicted RBP14.63□□□□□ -0.07
RIMKLA-202ENST00000431473 FOXD4L6Q3SYB3 417 aaPredicted RBP14.63□□□□□ -0.07
RIMKLA-202ENST00000431473 FOXD4L3Q6VB84 417 aaPredicted RBP14.63□□□□□ -0.07
RIMKLA-202ENST00000431473 CHMP3Q9Y3E7 222 aa14.62□□□□□ -0.07
RIMKLA-202ENST00000431473 GPATCH3Q96I76 525 aa14.62□□□□□ -0.07
RIMKLA-202ENST00000431473 TIMELESSQ9UNS1 1208 aa14.62□□□□□ -0.07
RIMKLA-202ENST00000431473 GSE1Q14687 1217 aa14.61□□□□□ -0.07
RIMKLA-202ENST00000431473 CSPP1Q1MSJ5 1256 aa14.61□□□□□ -0.07
RIMKLA-202ENST00000431473 PAK3O75914 559 aaPredicted RBP14.61□□□□□ -0.07
RIMKLA-202ENST00000431473 VSIG10Q8N0Z9 540 aa14.61□□□□□ -0.07
RIMKLA-202ENST00000431473 DDX11L8A8MPP1 907 aa14.61□□□□□ -0.07
RIMKLA-202ENST00000431473 KANK4Q5T7N3 995 aaPredicted RBP14.61□□□□□ -0.07
RIMKLA-202ENST00000431473 VPS8Q8N3P4 1428 aa14.6□□□□□ -0.07
RIMKLA-202ENST00000431473 SLC4A10Q6U841 1118 aa14.6□□□□□ -0.07
RIMKLA-202ENST00000431473 HDGFL2Q7Z4V5 671 aaPredicted RBP14.59□□□□□ -0.07
RIMKLA-202ENST00000431473 ST18O60284 1047 aa14.59□□□□□ -0.07
RIMKLA-202ENST00000431473 MLECQ14165 292 aa14.59□□□□□ -0.07
RIMKLA-202ENST00000431473 CENPJQ9HC77 1338 aaPredicted RBP14.59□□□□□ -0.07
RIMKLA-202ENST00000431473 ERCC6Q03468 1493 aa14.58□□□□□ -0.08
RIMKLA-202ENST00000431473 PLIN1O60240 522 aa14.58□□□□□ -0.08
RIMKLA-202ENST00000431473 ANO8Q9HCE9 1232 aaPredicted RBP14.58□□□□□ -0.08
RIMKLA-202ENST00000431473 MPHOSPH9Q99550 1183 aa14.57□□□□□ -0.08
RIMKLA-202ENST00000431473 USP35Q9P2H5 1018 aa14.57□□□□□ -0.08
RIMKLA-202ENST00000431473 CUX2O14529 1486 aa14.57□□□□□ -0.08
RIMKLA-202ENST00000431473 GORABQ5T7V8 394 aa14.57□□□□□ -0.08
RIMKLA-202ENST00000431473 KIF16BQ96L93 1317 aa14.57□□□□□ -0.08
RIMKLA-202ENST00000431473 RASSF8Q8NHQ8 419 aa14.56□□□□□ -0.08
RIMKLA-202ENST00000431473 BAZ1AQ9NRL2 1556 aaPredicted RBP14.56□□□□□ -0.08
RIMKLA-202ENST00000431473 SPAG9O60271 1321 aaKnown RBP14.55□□□□□ -0.08
RIMKLA-202ENST00000431473 CCAR2Q8N163 923 aaKnown RBP14.55□□□□□ -0.08
RIMKLA-202ENST00000431473 EIF3AQ14152 1382 aaKnown RBP14.55□□□□□ -0.08
RIMKLA-202ENST00000431473 PDE4AP27815 886 aa14.55□□□□□ -0.08
RIMKLA-202ENST00000431473 STK31Q9BXU1 1019 aa14.54□□□□□ -0.08
RIMKLA-202ENST00000431473 PES1O00541 588 aaKnown RBP14.54□□□□□ -0.08
RIMKLA-202ENST00000431473 DDX49Q9Y6V7 483 aaKnown RBP14.54□□□□□ -0.08
RIMKLA-202ENST00000431473 CARMIL1Q5VZK9 1371 aa14.54□□□□□ -0.08
RIMKLA-202ENST00000431473 NACADO15069 1562 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms