RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 ABCC5O15440 1437 aa24.4■■□□□ 1.5
USHBP1-203ENST00000431146 GCC2Q8IWJ2 1684 aa24.4■■□□□ 1.5
USHBP1-203ENST00000431146 MYT1Q01538 1121 aa24.39■■□□□ 1.49
USHBP1-203ENST00000431146 KDM6BO15054 1643 aa24.39■■□□□ 1.49
USHBP1-203ENST00000431146 SIN3AQ96ST3 1273 aa24.37■■□□□ 1.49
USHBP1-203ENST00000431146 ZNF316A6NFI3 1004 aaPredicted RBP24.35■■□□□ 1.49
USHBP1-203ENST00000431146 NEUROD1Q13562 356 aa24.34■■□□□ 1.49
USHBP1-203ENST00000431146 AKNAQ7Z591 1439 aa24.34■■□□□ 1.49
USHBP1-203ENST00000431146 ZCCHC11Q5TAX3 1644 aaKnown RBP24.3■■□□□ 1.48
USHBP1-203ENST00000431146 ROCK1Q13464 1354 aa24.28■■□□□ 1.48
USHBP1-203ENST00000431146 TRIM52Q96A61 297 aa24.28■■□□□ 1.48
USHBP1-203ENST00000431146 TTC37Q6PGP7 1564 aa24.27■■□□□ 1.48
USHBP1-203ENST00000431146 CROCC2H7BZ55 1655 aa24.27■■□□□ 1.48
USHBP1-203ENST00000431146 KCNH8Q96L42 1107 aa24.26■■□□□ 1.47
USHBP1-203ENST00000431146 CDC42BPBQ9Y5S2 1711 aa24.26■■□□□ 1.47
USHBP1-203ENST00000431146 UHRF1BP1LA0JNW5 1464 aa24.26■■□□□ 1.47
USHBP1-203ENST00000431146 DIEXFQ68CQ4 756 aaKnown RBP24.25■■□□□ 1.47
USHBP1-203ENST00000431146 OSCARQ8IYS5 282 aa24.25■■□□□ 1.47
USHBP1-203ENST00000431146 PREX2Q70Z35 1606 aa24.24■■□□□ 1.47
USHBP1-203ENST00000431146 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.23■■□□□ 1.47
USHBP1-203ENST00000431146 ADGBQ8N7X0 1667 aa24.23■■□□□ 1.47
USHBP1-203ENST00000431146 KDM5BQ9UGL1 1544 aa24.22■■□□□ 1.47
USHBP1-203ENST00000431146 HNRNPMP52272 730 aaKnown RBP eCLIP24.2■■□□□ 1.47
USHBP1-203ENST00000431146 NCOA1Q15788 1441 aa24.2■■□□□ 1.46
USHBP1-203ENST00000431146 SAMD9LQ8IVG5 1584 aa24.19■■□□□ 1.46
USHBP1-203ENST00000431146 DENND4BO75064 1496 aaPredicted RBP24.18■■□□□ 1.46
USHBP1-203ENST00000431146 ARHGAP5Q13017 1502 aa24.16■■□□□ 1.46
USHBP1-203ENST00000431146 MYO5CQ9NQX4 1742 aa24.16■■□□□ 1.46
USHBP1-203ENST00000431146 ADGRL2O95490 1459 aa24.15■■□□□ 1.46
USHBP1-203ENST00000431146 MPHOSPH9Q99550 1183 aa24.14■■□□□ 1.45
USHBP1-203ENST00000431146 C9orf84Q5VXU9 1444 aa24.14■■□□□ 1.45
USHBP1-203ENST00000431146 ANKRD30AQ9BXX3 1397 aa24.13■■□□□ 1.45
USHBP1-203ENST00000431146 MBD5Q9P267 1494 aa24.13■■□□□ 1.45
USHBP1-203ENST00000431146 FOXD1Q16676 465 aa24.12■■□□□ 1.45
USHBP1-203ENST00000431146 TSPY4P0CV99 314 aa24.1■■□□□ 1.45
USHBP1-203ENST00000431146 TSPY10P0CW01 314 aa24.1■■□□□ 1.45
USHBP1-203ENST00000431146 SHANK2Q9UPX8 1470 aa24.1■■□□□ 1.45
USHBP1-203ENST00000431146 ARHGEF5Q12774 1597 aa24.1■■□□□ 1.45
USHBP1-203ENST00000431146 SYCP2Q9BX26 1530 aa24.1■■□□□ 1.45
USHBP1-203ENST00000431146 TONSLQ96HA7 1378 aa24.07■■□□□ 1.44
USHBP1-203ENST00000431146 TIMELESSQ9UNS1 1208 aa24.07■■□□□ 1.44
USHBP1-203ENST00000431146 CCDC141Q6ZP82 1450 aa24.07■■□□□ 1.44
USHBP1-203ENST00000431146 ANKRD50Q9ULJ7 1429 aa24.05■■□□□ 1.44
USHBP1-203ENST00000431146 SLC4A1APQ9BWU0 796 aaKnown RBP24.04■■□□□ 1.44
USHBP1-203ENST00000431146 PPP1R15AO75807 674 aaPredicted RBP24.03■■□□□ 1.44
USHBP1-203ENST00000431146 PLCH2O75038 1416 aa24.03■■□□□ 1.44
USHBP1-203ENST00000431146 WDR7Q9Y4E6 1490 aa24.03■■□□□ 1.44
USHBP1-203ENST00000431146 KIF15Q9NS87 1388 aa24.01■■□□□ 1.43
USHBP1-203ENST00000431146 PZPP20742 1482 aa24■■□□□ 1.43
USHBP1-203ENST00000431146 ARHGEF12Q9NZN5 1544 aa23.99■■□□□ 1.43
USHBP1-203ENST00000431146 ACIN1Q9UKV3 1341 aaKnown RBP23.98■■□□□ 1.43
USHBP1-203ENST00000431146 RSPH4AQ5TD94 716 aa23.97■■□□□ 1.43
USHBP1-203ENST00000431146 EFCAB2Q5VUJ9 269 aa23.97■■□□□ 1.43
USHBP1-203ENST00000431146 ASXL2Q76L83 1435 aa23.96■■□□□ 1.43
USHBP1-203ENST00000431146 KIAA1107Q9UPP5 1409 aa23.95■■□□□ 1.43
USHBP1-203ENST00000431146 PLEKHH2Q8IVE3 1493 aa23.95■■□□□ 1.42
USHBP1-203ENST00000431146 ANKRD30BQ9BXX2 1392 aa23.95■■□□□ 1.42
USHBP1-203ENST00000431146 ABCC1P33527 1531 aa23.92■■□□□ 1.42
USHBP1-203ENST00000431146 MAST1Q9Y2H9 1570 aa23.91■■□□□ 1.42
USHBP1-203ENST00000431146 NUP155O75694 1391 aa23.91■■□□□ 1.42
USHBP1-203ENST00000431146 NPM1P06748 294 aaKnown RBP eCLIP23.9■■□□□ 1.42
USHBP1-203ENST00000431146 ABCA9Q8IUA7 1624 aa23.9■■□□□ 1.42
USHBP1-203ENST00000431146 PKD2Q13563 968 aa23.89■■□□□ 1.41
USHBP1-203ENST00000431146 TRAPPC8Q9Y2L5 1435 aa23.88■■□□□ 1.41
USHBP1-203ENST00000431146 HIRIP3Q9BW71 556 aaPredicted RBP23.87■■□□□ 1.41
USHBP1-203ENST00000431146 MIER1Q8N108 512 aa23.86■■□□□ 1.41
USHBP1-203ENST00000431146 ARAP3Q8WWN8 1544 aa23.85■■□□□ 1.41
USHBP1-203ENST00000431146 RPRD2Q5VT52 1461 aaKnown RBP23.85■■□□□ 1.41
USHBP1-203ENST00000431146 FANCAO15360 1455 aa23.84■■□□□ 1.41
USHBP1-203ENST00000431146 PLXNC1O60486 1568 aa23.84■■□□□ 1.41
USHBP1-203ENST00000431146 L3MBTL2Q969R5 705 aa23.84■■□□□ 1.41
USHBP1-203ENST00000431146 AFAP1Q8N556 730 aa23.83■■□□□ 1.4
USHBP1-203ENST00000431146 KDM5DQ9BY66 1539 aa23.82■■□□□ 1.4
USHBP1-203ENST00000431146 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.78■■□□□ 1.4
USHBP1-203ENST00000431146 TEX14Q8IWB6 1497 aa23.77■■□□□ 1.4
USHBP1-203ENST00000431146 SPAG9O60271 1321 aaKnown RBP23.76■■□□□ 1.39
USHBP1-203ENST00000431146 DUOX2Q9NRD8 1548 aa23.76■■□□□ 1.39
USHBP1-203ENST00000431146 FAM135AQ9P2D6 1515 aa23.76■■□□□ 1.39
USHBP1-203ENST00000431146 CYB5RLQ6IPT4 315 aa23.75■■□□□ 1.39
USHBP1-203ENST00000431146 ADGRL1O94910 1474 aa23.75■■□□□ 1.39
USHBP1-203ENST00000431146 UNC13BO14795 1591 aa23.74■■□□□ 1.39
USHBP1-203ENST00000431146 SCAPERQ9BY12 1400 aa23.73■■□□□ 1.39
USHBP1-203ENST00000431146 ZFYVE16Q7Z3T8 1539 aa23.73■■□□□ 1.39
USHBP1-203ENST00000431146 RIMBP3CA6NJZ7 1639 aa23.71■■□□□ 1.39
USHBP1-203ENST00000431146 RIMBP3BA6NNM3 1639 aa23.71■■□□□ 1.39
USHBP1-203ENST00000431146 RIMBP3Q9UFD9 1639 aa23.71■■□□□ 1.39
USHBP1-203ENST00000431146 ERBINQ96RT1 1412 aa23.7■■□□□ 1.38
USHBP1-203ENST00000431146 NBPF8Q3BBV2 869 aa23.69■■□□□ 1.38
USHBP1-203ENST00000431146 CD109Q6YHK3 1445 aa23.69■■□□□ 1.38
USHBP1-203ENST00000431146 MYT1LQ9UL68 1186 aa23.68■■□□□ 1.38
USHBP1-203ENST00000431146 RTEL1-TNFRSF6BF6WH68 1400 aa23.67■■□□□ 1.38
USHBP1-203ENST00000431146 ATP7AQ04656 1500 aa23.67■■□□□ 1.38
USHBP1-203ENST00000431146 INO80Q9ULG1 1556 aaPredicted RBP23.66■■□□□ 1.38
USHBP1-203ENST00000431146 DDX10Q13206 875 aaKnown RBP23.66■■□□□ 1.38
USHBP1-203ENST00000431146 IQGAP3Q86VI3 1631 aa23.66■■□□□ 1.38
USHBP1-203ENST00000431146 MAGI2Q86UL8 1455 aa23.62■■□□□ 1.37
USHBP1-203ENST00000431146 HSPA5P11021 654 aaKnown RBP23.61■■□□□ 1.37
USHBP1-203ENST00000431146 ZNF326Q5BKZ1 582 aaKnown RBP23.6■■□□□ 1.37
USHBP1-203ENST00000431146 YTHDC1Q96MU7 727 aaKnown RBP23.59■■□□□ 1.37
USHBP1-203ENST00000431146 CFAP74Q9C0B2 1584 aa23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms