RNA–Protein interactions for RNA: ENST00000430709.1

ITGAV-203, Transcript of integrin subunit alpha V, humanhuman

TSL 5

Gene ITGAV, Length 736 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAV-203ENST00000430709 MARVELD3Q96A59 401 aa13.66□□□□□ -0.22
ITGAV-203ENST00000430709 BAZ1BQ9UIG0 1483 aaKnown RBP13.65□□□□□ -0.22
ITGAV-203ENST00000430709 PEG3Q9GZU2 1588 aa13.65□□□□□ -0.22
ITGAV-203ENST00000430709 PDS5BQ9NTI5 1447 aa13.63□□□□□ -0.23
ITGAV-203ENST00000430709 BAZ1AQ9NRL2 1556 aaPredicted RBP13.62□□□□□ -0.23
ITGAV-203ENST00000430709 EMP3P54852 163 aa13.6□□□□□ -0.23
ITGAV-203ENST00000430709 EFCAB3Q8N7B9 438 aa13.6□□□□□ -0.23
ITGAV-203ENST00000430709 RIOK3O14730 519 aaKnown RBP13.57□□□□□ -0.24
ITGAV-203ENST00000430709 VGFO15240 615 aaPredicted RBP13.53□□□□□ -0.24
ITGAV-203ENST00000430709 SPNS2Q8IVW8 549 aa13.53□□□□□ -0.24
ITGAV-203ENST00000430709 RNF25Q96BH1 459 aaPredicted RBP13.53□□□□□ -0.24
ITGAV-203ENST00000430709 SOX12O15370 315 aa13.52□□□□□ -0.25
ITGAV-203ENST00000430709 HOXB3P14651 431 aaPredicted RBP13.52□□□□□ -0.25
ITGAV-203ENST00000430709 CADPSQ9ULU8 1353 aa13.51□□□□□ -0.25
ITGAV-203ENST00000430709 HS3ST6Q96QI5 342 aa13.51□□□□□ -0.25
ITGAV-203ENST00000430709 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.5□□□□□ -0.25
ITGAV-203ENST00000430709 ZFP91Q96JP5 570 aaPredicted RBP13.5□□□□□ -0.25
ITGAV-203ENST00000430709 FAM205CA6NFA0 338 aa13.49□□□□□ -0.25
ITGAV-203ENST00000430709 MMRN1Q13201 1228 aa13.49□□□□□ -0.25
ITGAV-203ENST00000430709 DOK7Q18PE1 504 aa13.49□□□□□ -0.25
ITGAV-203ENST00000430709 MRC2Q9UBG0 1479 aa13.48□□□□□ -0.25
ITGAV-203ENST00000430709 WDR62O43379 1518 aa13.47□□□□□ -0.25
ITGAV-203ENST00000430709 POTEB3A0JP26 581 aa13.46□□□□□ -0.25
ITGAV-203ENST00000430709 POTEBQ6S5H4 581 aa13.46□□□□□ -0.25
ITGAV-203ENST00000430709 MICALL2Q8IY33 904 aa13.46□□□□□ -0.25
ITGAV-203ENST00000430709 ZNF710Q8N1W2 664 aa13.46□□□□□ -0.25
ITGAV-203ENST00000430709 HOXB1P14653 301 aaPredicted RBP13.45□□□□□ -0.26
ITGAV-203ENST00000430709 MROH2BQ7Z745 1585 aa13.43□□□□□ -0.26
ITGAV-203ENST00000430709 TAOK2Q9UL54 1235 aa13.43□□□□□ -0.26
ITGAV-203ENST00000430709 KRTAP3-3Q9BYR6 98 aa13.42□□□□□ -0.26
ITGAV-203ENST00000430709 KRTAP3-2Q9BYR7 98 aa13.42□□□□□ -0.26
ITGAV-203ENST00000430709 RIMBP2O15034 1052 aa13.41□□□□□ -0.26
ITGAV-203ENST00000430709 MS4A4AQ96JQ5 239 aa13.41□□□□□ -0.26
ITGAV-203ENST00000430709 PHF8Q9UPP1 1060 aa13.4□□□□□ -0.26
ITGAV-203ENST00000430709 TMEM92Q6UXU6 159 aa13.38□□□□□ -0.27
ITGAV-203ENST00000430709 RIMBP3CA6NJZ7 1639 aa13.37□□□□□ -0.27
ITGAV-203ENST00000430709 RIMBP3BA6NNM3 1639 aa13.37□□□□□ -0.27
ITGAV-203ENST00000430709 RIMBP3Q9UFD9 1639 aa13.37□□□□□ -0.27
ITGAV-203ENST00000430709 ZSWIM6Q9HCJ5 1215 aa13.36□□□□□ -0.27
ITGAV-203ENST00000430709 CEP164Q9UPV0 1460 aa13.36□□□□□ -0.27
ITGAV-203ENST00000430709 NLRP6P59044 892 aa13.34□□□□□ -0.27
ITGAV-203ENST00000430709 ERBB3P21860 1342 aa13.34□□□□□ -0.27
ITGAV-203ENST00000430709 BCL11BQ9C0K0 894 aaPredicted RBP13.33□□□□□ -0.28
ITGAV-203ENST00000430709 FANCD2Q9BXW9 1451 aa13.31□□□□□ -0.28
ITGAV-203ENST00000430709 FBXO22Q8NEZ5 403 aa13.29□□□□□ -0.28
ITGAV-203ENST00000430709 STK24Q9Y6E0 443 aa13.29□□□□□ -0.28
ITGAV-203ENST00000430709 CFTRP13569 1480 aa13.29□□□□□ -0.28
ITGAV-203ENST00000430709 ECM2O94769 699 aaPredicted RBP13.25□□□□□ -0.29
ITGAV-203ENST00000430709 GPR153Q6NV75 609 aa13.25□□□□□ -0.29
ITGAV-203ENST00000430709 STK25O00506 426 aa13.24□□□□□ -0.29
ITGAV-203ENST00000430709 VARS2Q5ST30 1063 aaKnown RBP13.24□□□□□ -0.29
ITGAV-203ENST00000430709 MFRPQ9BY79 579 aa13.23□□□□□ -0.29
ITGAV-203ENST00000430709 ARHGEF11O15085 1522 aa13.21□□□□□ -0.29
ITGAV-203ENST00000430709 WIZO95785 1651 aa13.21□□□□□ -0.3
ITGAV-203ENST00000430709 URB2Q14146 1524 aaKnown RBP13.2□□□□□ -0.3
ITGAV-203ENST00000430709 ZNF687Q8N1G0 1237 aa13.19□□□□□ -0.3
ITGAV-203ENST00000430709 PKD2Q13563 968 aa13.15□□□□□ -0.3
ITGAV-203ENST00000430709 ARSIQ5FYB1 569 aa13.15□□□□□ -0.3
ITGAV-203ENST00000430709 KIF3CO14782 793 aa13.14□□□□□ -0.31
ITGAV-203ENST00000430709 IFT140Q96RY7 1462 aa13.13□□□□□ -0.31
ITGAV-203ENST00000430709 RGL2O15211 777 aa13.12□□□□□ -0.31
ITGAV-203ENST00000430709 PRDM2Q13029 1718 aa13.1□□□□□ -0.31
ITGAV-203ENST00000430709 C2orf72A6NCS6 295 aa13.09□□□□□ -0.31
ITGAV-203ENST00000430709 TOP2AP11388 1531 aaKnown RBP13.08□□□□□ -0.31
ITGAV-203ENST00000430709 CHD1O14646 1710 aa13.08□□□□□ -0.32
ITGAV-203ENST00000430709 ZNF316A6NFI3 1004 aaPredicted RBP13.08□□□□□ -0.32
ITGAV-203ENST00000430709 RNF166Q96A37 237 aaPredicted RBP13.08□□□□□ -0.32
ITGAV-203ENST00000430709 ZNF608Q9ULD9 1512 aaPredicted RBP13.08□□□□□ -0.32
ITGAV-203ENST00000430709 RSF1Q96T23 1441 aaPredicted RBP13.07□□□□□ -0.32
ITGAV-203ENST00000430709 PTGER2P43116 358 aa13.06□□□□□ -0.32
ITGAV-203ENST00000430709 CYB5RLQ6IPT4 315 aa13.06□□□□□ -0.32
ITGAV-203ENST00000430709 KHSRPQ92945 711 aaKnown RBP eCLIP13.06□□□□□ -0.32
ITGAV-203ENST00000430709 ARAP1Q96P48 1450 aa13.05□□□□□ -0.32
ITGAV-203ENST00000430709 SLC34A2O95436 690 aa13.05□□□□□ -0.32
ITGAV-203ENST00000430709 MYT1LQ9UL68 1186 aa13.05□□□□□ -0.32
ITGAV-203ENST00000430709 ABCC8Q09428 1581 aa13.05□□□□□ -0.32
ITGAV-203ENST00000430709 TMC2Q8TDI7 906 aa13.02□□□□□ -0.33
ITGAV-203ENST00000430709 TOPBP1Q92547 1522 aa13.02□□□□□ -0.33
ITGAV-203ENST00000430709 EIF4G3O43432 1585 aaKnown RBP13.01□□□□□ -0.33
ITGAV-203ENST00000430709 NUDT7P0C024 238 aa12.98□□□□□ -0.33
ITGAV-203ENST00000430709 PCDHGA4Q9Y5G9 962 aa12.97□□□□□ -0.33
ITGAV-203ENST00000430709 PPP1R37O75864 691 aa12.95□□□□□ -0.34
ITGAV-203ENST00000430709 PBX2P40425 430 aa12.95□□□□□ -0.34
ITGAV-203ENST00000430709 LSM11P83369 360 aaKnown RBP eCLIP12.95□□□□□ -0.34
ITGAV-203ENST00000430709 ANKRD13DQ6ZTN6 518 aa12.95□□□□□ -0.34
ITGAV-203ENST00000430709 DNMBPQ6XZF7 1577 aa12.94□□□□□ -0.34
ITGAV-203ENST00000430709 CCDC88BA6NC98 1476 aa12.94□□□□□ -0.34
ITGAV-203ENST00000430709 AQRO60306 1485 aaKnown RBP eCLIP12.93□□□□□ -0.34
ITGAV-203ENST00000430709 TARBP1Q13395 1621 aaKnown RBP12.93□□□□□ -0.34
ITGAV-203ENST00000430709 LHX6Q9UPM6 363 aa12.93□□□□□ -0.34
ITGAV-203ENST00000430709 HS6ST3Q8IZP7 471 aa12.92□□□□□ -0.34
ITGAV-203ENST00000430709 PSDA5PKW4 1024 aaPredicted RBP12.87□□□□□ -0.35
ITGAV-203ENST00000430709 POLA1P09884 1462 aaPredicted RBP12.86□□□□□ -0.35
ITGAV-203ENST00000430709 FOXK1P85037 733 aa12.86□□□□□ -0.35
ITGAV-203ENST00000430709 PTCD2Q8WV60 388 aaKnown RBP12.86□□□□□ -0.35
ITGAV-203ENST00000430709 WDR97A6NE52 1622 aa12.85□□□□□ -0.35
ITGAV-203ENST00000430709 POTEEQ6S8J3 1075 aa12.85□□□□□ -0.35
ITGAV-203ENST00000430709 CLASP1Q7Z460 1538 aa12.84□□□□□ -0.35
ITGAV-203ENST00000430709 GPHNQ9NQX3 736 aaPredicted RBP12.83□□□□□ -0.36
ITGAV-203ENST00000430709 KDM4FA0A1W2PPD8 638 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms