RNA–Protein interactions for RNA: ENST00000430321.5

UBR3-204, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-204ENST00000430321 GAPVD1Q14C86 1478 aa7.65□□□□□ -1.19
UBR3-204ENST00000430321 ZRSR1Q15695 479 aaKnown RBP7.64□□□□□ -1.19
UBR3-204ENST00000430321 RGL3Q3MIN7 710 aa7.64□□□□□ -1.19
UBR3-204ENST00000430321 VGFO15240 615 aaPredicted RBP7.63□□□□□ -1.19
UBR3-204ENST00000430321 MRS2Q9HD23 443 aa7.62□□□□□ -1.19
UBR3-204ENST00000430321 BECN1Q14457 450 aa7.62□□□□□ -1.19
UBR3-204ENST00000430321 G3V3G9 751 aa7.62□□□□□ -1.19
UBR3-204ENST00000430321 DCAF8Q5TAQ9 597 aa7.62□□□□□ -1.19
UBR3-204ENST00000430321 FTSJ3Q8IY81 847 aaKnown RBP7.62□□□□□ -1.19
UBR3-204ENST00000430321 GOLGA6L22H0YM25 854 aa7.61□□□□□ -1.19
UBR3-204ENST00000430321 CHMP4CQ96CF2 233 aa7.61□□□□□ -1.19
UBR3-204ENST00000430321 OS9Q13438 667 aaPredicted RBP7.61□□□□□ -1.19
UBR3-204ENST00000430321 VPS8Q8N3P4 1428 aa7.61□□□□□ -1.19
UBR3-204ENST00000430321 CUX1P39880 1505 aa7.61□□□□□ -1.19
UBR3-204ENST00000430321 DMRT2Q9Y5R5 561 aa7.61□□□□□ -1.19
UBR3-204ENST00000430321 KIF3BO15066 747 aa7.61□□□□□ -1.19
UBR3-204ENST00000430321 CYB5RLQ6IPT4 315 aa7.61□□□□□ -1.19
UBR3-204ENST00000430321 HSP90B1P14625 803 aaKnown RBP7.6□□□□□ -1.19
UBR3-204ENST00000430321 FAM69CQ0P6D2 419 aa7.6□□□□□ -1.19
UBR3-204ENST00000430321 MORC1Q86VD1 984 aa7.6□□□□□ -1.19
UBR3-204ENST00000430321 SF3B2Q13435 895 aaKnown RBP7.6□□□□□ -1.19
UBR3-204ENST00000430321 SYNJ2O15056 1496 aa7.6□□□□□ -1.19
UBR3-204ENST00000430321 IPO8O15397 1037 aaKnown RBP7.6□□□□□ -1.19
UBR3-204ENST00000430321 PPM1GO15355 546 aaPredicted RBP7.59□□□□□ -1.19
UBR3-204ENST00000430321 NGDNQ8NEJ9 315 aaKnown RBP7.59□□□□□ -1.19
UBR3-204ENST00000430321 DDRGK1Q96HY6 314 aa7.59□□□□□ -1.19
UBR3-204ENST00000430321 ROCK2O75116 1388 aaKnown RBP7.59□□□□□ -1.19
UBR3-204ENST00000430321 L1TD1Q5T7N2 865 aaKnown RBP7.59□□□□□ -1.19
UBR3-204ENST00000430321 BCL11AQ9H165 835 aa7.59□□□□□ -1.19
UBR3-204ENST00000430321 GOLGA6L6A8MZA4 724 aa7.59□□□□□ -1.19
UBR3-204ENST00000430321 MCCP23508 829 aa7.59□□□□□ -1.19
UBR3-204ENST00000430321 ATF3P18847 181 aa7.58□□□□□ -1.2
UBR3-204ENST00000430321 PSME1Q06323 249 aa7.58□□□□□ -1.2
UBR3-204ENST00000430321 LAMC3Q9Y6N6 1575 aa7.58□□□□□ -1.2
UBR3-204ENST00000430321 PAK3O75914 559 aaPredicted RBP7.58□□□□□ -1.2
UBR3-204ENST00000430321 HNRNPUQ00839 825 aaKnown RBP eCLIP7.58□□□□□ -1.2
UBR3-204ENST00000430321 NUP155O75694 1391 aa7.58□□□□□ -1.2
UBR3-204ENST00000430321 GPATCH3Q96I76 525 aa7.57□□□□□ -1.2
UBR3-204ENST00000430321 EVA1CP58658 441 aa7.57□□□□□ -1.2
UBR3-204ENST00000430321 SCAPERQ9BY12 1400 aa7.57□□□□□ -1.2
UBR3-204ENST00000430321 FAM9BQ8IZU0 186 aa7.56□□□□□ -1.2
UBR3-204ENST00000430321 PHF23Q9BUL5 403 aaPredicted RBP7.56□□□□□ -1.2
UBR3-204ENST00000430321 PHLDB1Q86UU1 1377 aa7.56□□□□□ -1.2
UBR3-204ENST00000430321 LRRFIP1Q32MZ4 808 aaKnown RBP7.56□□□□□ -1.2
UBR3-204ENST00000430321 CCDC34Q96HJ3 373 aa7.56□□□□□ -1.2
UBR3-204ENST00000430321 KTN1Q86UP2 1357 aaKnown RBP7.55□□□□□ -1.2
UBR3-204ENST00000430321 NRDCO43847 1150 aa7.55□□□□□ -1.2
UBR3-204ENST00000430321 STK31Q9BXU1 1019 aa7.55□□□□□ -1.2
UBR3-204ENST00000430321 DCAF11Q8TEB1 546 aa7.55□□□□□ -1.2
UBR3-204ENST00000430321 PLEKHG5O94827 1062 aa7.54□□□□□ -1.2
UBR3-204ENST00000430321 CC2D2AQ9P2K1 1620 aa7.54□□□□□ -1.2
UBR3-204ENST00000430321 FGD5Q6ZNL6 1462 aa7.54□□□□□ -1.2
UBR3-204ENST00000430321 CCDC136Q96JN2 1154 aa7.54□□□□□ -1.2
UBR3-204ENST00000430321 MIA2Q96PC5 1412 aa7.54□□□□□ -1.2
UBR3-204ENST00000430321 U2SURPO15042 1029 aaKnown RBP7.54□□□□□ -1.2
UBR3-204ENST00000430321 SMC4Q9NTJ3 1288 aa7.54□□□□□ -1.2
UBR3-204ENST00000430321 MYOM3Q5VTT5 1437 aa7.54□□□□□ -1.2
UBR3-204ENST00000430321 RALBP1Q15311 655 aa7.54□□□□□ -1.2
UBR3-204ENST00000430321 THEMISQ8N1K5 641 aaPredicted RBP7.54□□□□□ -1.2
UBR3-204ENST00000430321 EVC2Q86UK5 1308 aa7.53□□□□□ -1.2
UBR3-204ENST00000430321 PKD2Q13563 968 aa7.53□□□□□ -1.2
UBR3-204ENST00000430321 AMOTL1Q8IY63 956 aa7.53□□□□□ -1.2
UBR3-204ENST00000430321 EFCAB5A4FU69 1503 aa7.53□□□□□ -1.2
UBR3-204ENST00000430321 CCDC144AA2RUR9 1427 aa7.53□□□□□ -1.2
UBR3-204ENST00000430321 HTATSF1O43719 755 aaKnown RBP7.53□□□□□ -1.2
UBR3-204ENST00000430321 AMPHP49418 695 aa7.53□□□□□ -1.2
UBR3-204ENST00000430321 FGD1P98174 961 aa7.53□□□□□ -1.2
UBR3-204ENST00000430321 PPP6R1Q9UPN7 881 aa7.53□□□□□ -1.2
UBR3-204ENST00000430321 C1orf141Q5JVX7 400 aa7.53□□□□□ -1.2
UBR3-204ENST00000430321 NOL10Q9BSC4 688 aaKnown RBP7.53□□□□□ -1.2
UBR3-204ENST00000430321 NGEFQ8N5V2 710 aa7.53□□□□□ -1.2
UBR3-204ENST00000430321 TAF7LQ5H9L4 462 aa7.52□□□□□ -1.21
UBR3-204ENST00000430321 SYNJ1O43426 1573 aa7.52□□□□□ -1.21
UBR3-204ENST00000430321 GPRASP1Q5JY77 1395 aa7.52□□□□□ -1.21
UBR3-204ENST00000430321 HMMRO75330 724 aa7.52□□□□□ -1.21
UBR3-204ENST00000430321 GTF2E1P29083 439 aaPredicted RBP7.52□□□□□ -1.21
UBR3-204ENST00000430321 WIZO95785 1651 aa7.52□□□□□ -1.21
UBR3-204ENST00000430321 KCNJ4P48050 445 aa7.51□□□□□ -1.21
UBR3-204ENST00000430321 ROCK1Q13464 1354 aa7.51□□□□□ -1.21
UBR3-204ENST00000430321 DHX57Q6P158 1386 aaKnown RBP7.51□□□□□ -1.21
UBR3-204ENST00000430321 DDX10Q13206 875 aaKnown RBP7.51□□□□□ -1.21
UBR3-204ENST00000430321 CGNL1Q0VF96 1302 aa7.51□□□□□ -1.21
UBR3-204ENST00000430321 LAS1LQ9Y4W2 734 aaKnown RBP7.5□□□□□ -1.21
UBR3-204ENST00000430321 DNMBPQ6XZF7 1577 aa7.5□□□□□ -1.21
UBR3-204ENST00000430321 PTMSP20962 102 aa7.5□□□□□ -1.21
UBR3-204ENST00000430321 CFTRP13569 1480 aa7.5□□□□□ -1.21
UBR3-204ENST00000430321 COG3Q96JB2 828 aa7.5□□□□□ -1.21
UBR3-204ENST00000430321 TEX14Q8IWB6 1497 aa7.5□□□□□ -1.21
UBR3-204ENST00000430321 STK26Q9P289 416 aa7.49□□□□□ -1.21
UBR3-204ENST00000430321 FYCO1Q9BQS8 1478 aa7.49□□□□□ -1.21
UBR3-204ENST00000430321 RRBP1Q9P2E9 1410 aaKnown RBP7.49□□□□□ -1.21
UBR3-204ENST00000430321 GORABQ5T7V8 394 aa7.49□□□□□ -1.21
UBR3-204ENST00000430321 KIF21BO75037 1637 aa7.48□□□□□ -1.21
UBR3-204ENST00000430321 MAGI1Q96QZ7 1491 aaPredicted RBP7.48□□□□□ -1.21
UBR3-204ENST00000430321 PRG4Q92954 1404 aaPredicted RBP7.48□□□□□ -1.21
UBR3-204ENST00000430321 TTC5Q8N0Z6 440 aa7.48□□□□□ -1.21
UBR3-204ENST00000430321 SMG6Q86US8 1419 aaKnown RBP7.48□□□□□ -1.21
UBR3-204ENST00000430321 CHAF1AQ13111 956 aaPredicted RBP7.48□□□□□ -1.21
UBR3-204ENST00000430321 ARHGAP5Q13017 1502 aa7.48□□□□□ -1.21
UBR3-204ENST00000430321 TRIM34Q9BYJ4 488 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms