RNA–Protein interactions for RNA: ENST00000430297.6

RETREG2-203, Transcript of reticulophagy regulator family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG2, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-203ENST00000430297 PRXQ9BXM0 1461 aa25.35■■□□□ 1.65
RETREG2-203ENST00000430297 FGD6Q6ZV73 1430 aa25.35■■□□□ 1.65
RETREG2-203ENST00000430297 SPAG9O60271 1321 aaKnown RBP25.35■■□□□ 1.65
RETREG2-203ENST00000430297 PTPRGP23470 1445 aa25.34■■□□□ 1.65
RETREG2-203ENST00000430297 RALBP1Q15311 655 aa25.34■■□□□ 1.65
RETREG2-203ENST00000430297 PLEKHG5O94827 1062 aa25.33■■□□□ 1.65
RETREG2-203ENST00000430297 U2SURPO15042 1029 aaKnown RBP25.32■■□□□ 1.64
RETREG2-203ENST00000430297 SAFB2Q14151 953 aaKnown RBP eCLIP25.32■■□□□ 1.64
RETREG2-203ENST00000430297 FRAT1Q92837 279 aaPredicted RBP25.32■■□□□ 1.64
RETREG2-203ENST00000430297 AQRO60306 1485 aaKnown RBP eCLIP25.32■■□□□ 1.649e-7■■■■■ 32.2
RETREG2-203ENST00000430297 MLECQ14165 292 aa25.32■■□□□ 1.64
RETREG2-203ENST00000430297 FTSJ3Q8IY81 847 aaKnown RBP25.31■■□□□ 1.64
RETREG2-203ENST00000430297 MORC1Q86VD1 984 aa25.3■■□□□ 1.64
RETREG2-203ENST00000430297 ZBTB7CA1YPR0 619 aa25.3■■□□□ 1.64
RETREG2-203ENST00000430297 SRPK2P78362 688 aaKnown RBP25.3■■□□□ 1.64
RETREG2-203ENST00000430297 MYOM3Q5VTT5 1437 aa25.29■■□□□ 1.64
RETREG2-203ENST00000430297 DDRGK1Q96HY6 314 aa25.29■■□□□ 1.64
RETREG2-203ENST00000430297 TOP2BQ02880 1626 aa25.28■■□□□ 1.64
RETREG2-203ENST00000430297 CASKIN1Q8WXD9 1431 aa25.27■■□□□ 1.64
RETREG2-203ENST00000430297 LAS1LQ9Y4W2 734 aaKnown RBP25.27■■□□□ 1.64
RETREG2-203ENST00000430297 ZNF644Q9H582 1327 aaPredicted RBP25.26■■□□□ 1.63
RETREG2-203ENST00000430297 HMGXB3Q12766 1538 aa25.26■■□□□ 1.63
RETREG2-203ENST00000430297 ST20-MTHFSA0A0A6YYL1 179 aa25.25■■□□□ 1.63
RETREG2-203ENST00000430297 CUX1P39880 1505 aa25.25■■□□□ 1.63
RETREG2-203ENST00000430297 RGS3P49796 1198 aa25.25■■□□□ 1.63
RETREG2-203ENST00000430297 STK26Q9P289 416 aa25.24■■□□□ 1.63
RETREG2-203ENST00000430297 NESP48681 1621 aa25.23■■□□□ 1.63
RETREG2-203ENST00000430297 ERICH6BQ5W0A0 696 aa25.22■■□□□ 1.63
RETREG2-203ENST00000430297 ANP32EQ9BTT0 268 aa25.21■■□□□ 1.63
RETREG2-203ENST00000430297 BECN1Q14457 450 aa25.21■■□□□ 1.63
RETREG2-203ENST00000430297 ANP32BQ92688 251 aaKnown RBP25.21■■□□□ 1.63
RETREG2-203ENST00000430297 RRBP1Q9P2E9 1410 aaKnown RBP25.2■■□□□ 1.62
RETREG2-203ENST00000430297 NLRP13Q86W25 1043 aa25.19■■□□□ 1.62
RETREG2-203ENST00000430297 CCDC144AA2RUR9 1427 aa25.18■■□□□ 1.62
RETREG2-203ENST00000430297 UACAQ9BZF9 1416 aa25.18■■□□□ 1.62
RETREG2-203ENST00000430297 HDGFP51858 240 aaKnown RBP25.18■■□□□ 1.62
RETREG2-203ENST00000430297 PRKRIP1Q9H875 184 aaPredicted RBP25.17■■□□□ 1.62
RETREG2-203ENST00000430297 BICRAQ9NZM4 1560 aa25.17■■□□□ 1.62
RETREG2-203ENST00000430297 RCAN3Q9UKA8 241 aa25.17■■□□□ 1.62
RETREG2-203ENST00000430297 NCOA2Q15596 1464 aa25.16■■□□□ 1.62
RETREG2-203ENST00000430297 PNNQ9H307 717 aaKnown RBP25.16■■□□□ 1.62
RETREG2-203ENST00000430297 RBM19Q9Y4C8 960 aaKnown RBP25.15■■□□□ 1.62
RETREG2-203ENST00000430297 MS4A1P11836 297 aa25.12■■□□□ 1.61
RETREG2-203ENST00000430297 TOPBP1Q92547 1522 aa25.12■■□□□ 1.61
RETREG2-203ENST00000430297 WASHC2CQ9Y4E1 1318 aa25.12■■□□□ 1.61
RETREG2-203ENST00000430297 GRIN2BQ13224 1484 aa25.12■■□□□ 1.61
RETREG2-203ENST00000430297 FYCO1Q9BQS8 1478 aa25.11■■□□□ 1.61
RETREG2-203ENST00000430297 POLA1P09884 1462 aaPredicted RBP25.11■■□□□ 1.61
RETREG2-203ENST00000430297 EIF3AQ14152 1382 aaKnown RBP25.11■■□□□ 1.61
RETREG2-203ENST00000430297 ARXQ96QS3 562 aa25.1■■□□□ 1.61
RETREG2-203ENST00000430297 USP47Q96K76 1375 aa25.1■■□□□ 1.61
RETREG2-203ENST00000430297 CC2D2AQ9P2K1 1620 aa25.08■■□□□ 1.61
RETREG2-203ENST00000430297 HDGFL2Q7Z4V5 671 aaPredicted RBP25.07■■□□□ 1.6
RETREG2-203ENST00000430297 U2AF1L5P0DN76 240 aaPredicted RBP25.06■■□□□ 1.6
RETREG2-203ENST00000430297 U2AF1Q01081 240 aaKnown RBP eCLIP25.06■■□□□ 1.66e-6■■■■□ 22.1
RETREG2-203ENST00000430297 KIF15Q9NS87 1388 aa25.06■■□□□ 1.6
RETREG2-203ENST00000430297 NOP58Q9Y2X3 529 aaKnown RBP25.05■■□□□ 1.6
RETREG2-203ENST00000430297 LMOD2Q6P5Q4 547 aa25.04■■□□□ 1.6
RETREG2-203ENST00000430297 PANK3Q9H999 370 aa25.04■■□□□ 1.6
RETREG2-203ENST00000430297 SOX12O15370 315 aa25.03■■□□□ 1.6
RETREG2-203ENST00000430297 NUTM2DQ5VT03 806 aaPredicted RBP25.03■■□□□ 1.6
RETREG2-203ENST00000430297 CHMP4BQ9H444 224 aaKnown RBP25.03■■□□□ 1.6
RETREG2-203ENST00000430297 MYBBP1AQ9BQG0 1328 aaKnown RBP25.02■■□□□ 1.6
RETREG2-203ENST00000430297 PDE3BQ13370 1112 aa25■■□□□ 1.59
RETREG2-203ENST00000430297 TRAK1Q9UPV9 953 aa25■■□□□ 1.59
RETREG2-203ENST00000430297 EFCAB5A4FU69 1503 aa25■■□□□ 1.59
RETREG2-203ENST00000430297 TSHZ2Q9NRE2 1034 aa25■■□□□ 1.59
RETREG2-203ENST00000430297 ANKRD50Q9ULJ7 1429 aa24.98■■□□□ 1.59
RETREG2-203ENST00000430297 GOLGA2Q08379 1002 aa24.98■■□□□ 1.59
RETREG2-203ENST00000430297 TRHP20396 242 aaPredicted RBP24.97■■□□□ 1.59
RETREG2-203ENST00000430297 A0A0G2JS52 829 aa24.94■■□□□ 1.58
RETREG2-203ENST00000430297 PRDM2Q13029 1718 aa24.94■■□□□ 1.58
RETREG2-203ENST00000430297 CCDC146Q8IYE0 955 aa24.93■■□□□ 1.58
RETREG2-203ENST00000430297 KIF7Q2M1P5 1343 aa24.93■■□□□ 1.58
RETREG2-203ENST00000430297 TERF2IPQ9NYB0 399 aa24.93■■□□□ 1.58
RETREG2-203ENST00000430297 CCDC7Q96M83 1385 aa24.93■■□□□ 1.58
RETREG2-203ENST00000430297 TIAM1Q13009 1591 aa24.92■■□□□ 1.58
RETREG2-203ENST00000430297 ZBED9Q6R2W3 1325 aa24.91■■□□□ 1.58
RETREG2-203ENST00000430297 MRC2Q9UBG0 1479 aa24.91■■□□□ 1.58
RETREG2-203ENST00000430297 HAP1P54257 671 aaPredicted RBP24.91■■□□□ 1.58
RETREG2-203ENST00000430297 DNMBPQ6XZF7 1577 aa24.91■■□□□ 1.58
RETREG2-203ENST00000430297 CASC1Q6TDU7 716 aa24.89■■□□□ 1.58
RETREG2-203ENST00000430297 OSCARQ8IYS5 282 aa24.89■■□□□ 1.58
RETREG2-203ENST00000430297 EIF5BO60841 1220 aaKnown RBP24.89■■□□□ 1.58
RETREG2-203ENST00000430297 WASHC2AQ641Q2 1341 aa24.87■■□□□ 1.57
RETREG2-203ENST00000430297 TCERG1O14776 1098 aaKnown RBP24.87■■□□□ 1.57
RETREG2-203ENST00000430297 IFT140Q96RY7 1462 aa24.87■■□□□ 1.57
RETREG2-203ENST00000430297 PEG3Q9GZU2 1588 aa24.87■■□□□ 1.57
RETREG2-203ENST00000430297 IPO8O15397 1037 aaKnown RBP24.86■■□□□ 1.57
RETREG2-203ENST00000430297 GOLGA6L22H0YM25 854 aa24.85■■□□□ 1.57
RETREG2-203ENST00000430297 ABCA10Q8WWZ4 1543 aa24.85■■□□□ 1.57
RETREG2-203ENST00000430297 HFM1A2PYH4 1435 aa24.85■■□□□ 1.57
RETREG2-203ENST00000430297 VGFO15240 615 aaPredicted RBP24.85■■□□□ 1.57
RETREG2-203ENST00000430297 MIA2Q96PC5 1412 aa24.84■■□□□ 1.57
RETREG2-203ENST00000430297 CYB5RLQ6IPT4 315 aa24.82■■□□□ 1.56
RETREG2-203ENST00000430297 EHBP1L1Q8N3D4 1523 aa24.81■■□□□ 1.56
RETREG2-203ENST00000430297 DNAJC5BQ9UF47 199 aa24.81■■□□□ 1.56
RETREG2-203ENST00000430297 PRG4Q92954 1404 aaPredicted RBP24.8■■□□□ 1.56
RETREG2-203ENST00000430297 RTF1Q92541 710 aaKnown RBP24.8■■□□□ 1.56
RETREG2-203ENST00000430297 CALD1Q05682 793 aaKnown RBP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms