RNA–Protein interactions for RNA: ENST00000429953.6

AL353608.3-202, humanhuman

TSL 5 BASIC

Gene AL353608.3, Length 4,384 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353608.3-202ENST00000429953 NUTM2DQ5VT03 806 aaPredicted RBP17.52■□□□□ 0.4
AL353608.3-202ENST00000429953 TMF1P82094 1093 aa17.51■□□□□ 0.39
AL353608.3-202ENST00000429953 SOX12O15370 315 aa17.49■□□□□ 0.39
AL353608.3-202ENST00000429953 SRPK2P78362 688 aaKnown RBP17.48■□□□□ 0.39
AL353608.3-202ENST00000429953 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.48■□□□□ 0.39
AL353608.3-202ENST00000429953 CFAP53Q96M91 514 aa17.48■□□□□ 0.39
AL353608.3-202ENST00000429953 CUX1P39880 1505 aa17.46■□□□□ 0.39
AL353608.3-202ENST00000429953 DHX57Q6P158 1386 aaKnown RBP17.46■□□□□ 0.39
AL353608.3-202ENST00000429953 KIF21BO75037 1637 aa17.45■□□□□ 0.38
AL353608.3-202ENST00000429953 HMGXB3Q12766 1538 aa17.44■□□□□ 0.38
AL353608.3-202ENST00000429953 WASHC2CQ9Y4E1 1318 aa17.44■□□□□ 0.38
AL353608.3-202ENST00000429953 TOPBP1Q92547 1522 aa17.43■□□□□ 0.38
AL353608.3-202ENST00000429953 POLA1P09884 1462 aaPredicted RBP17.43■□□□□ 0.38
AL353608.3-202ENST00000429953 U2SURPO15042 1029 aaKnown RBP17.43■□□□□ 0.38
AL353608.3-202ENST00000429953 PHLDB1Q86UU1 1377 aa17.43■□□□□ 0.38
AL353608.3-202ENST00000429953 ARAP1Q96P48 1450 aa17.43■□□□□ 0.38
AL353608.3-202ENST00000429953 RSPH4AQ5TD94 716 aa17.42■□□□□ 0.38
AL353608.3-202ENST00000429953 ROCK2O75116 1388 aaKnown RBP17.42■□□□□ 0.38
AL353608.3-202ENST00000429953 HAP1P54257 671 aaPredicted RBP17.41■□□□□ 0.38
AL353608.3-202ENST00000429953 LAS1LQ9Y4W2 734 aaKnown RBP17.41■□□□□ 0.38
AL353608.3-202ENST00000429953 GRIN2BQ13224 1484 aa17.4■□□□□ 0.38
AL353608.3-202ENST00000429953 UPF2Q9HAU5 1272 aaKnown RBP17.39■□□□□ 0.37
AL353608.3-202ENST00000429953 B4GALNT3Q6L9W6 998 aa17.37■□□□□ 0.37
AL353608.3-202ENST00000429953 HSP90AA1P07900 732 aaKnown RBP17.36■□□□□ 0.37
AL353608.3-202ENST00000429953 MAPK8IP3Q9UPT6 1336 aa17.35■□□□□ 0.37
AL353608.3-202ENST00000429953 MRC2Q9UBG0 1479 aa17.35■□□□□ 0.37
AL353608.3-202ENST00000429953 TOP2BQ02880 1626 aa17.35■□□□□ 0.37
AL353608.3-202ENST00000429953 TSHZ2Q9NRE2 1034 aa17.34■□□□□ 0.37
AL353608.3-202ENST00000429953 PRXQ9BXM0 1461 aa17.34■□□□□ 0.37
AL353608.3-202ENST00000429953 NUDCQ9Y266 331 aa17.34■□□□□ 0.37
AL353608.3-202ENST00000429953 MORC1Q86VD1 984 aa17.33■□□□□ 0.37
AL353608.3-202ENST00000429953 FGD6Q6ZV73 1430 aa17.33■□□□□ 0.37
AL353608.3-202ENST00000429953 PRDM2Q13029 1718 aa17.33■□□□□ 0.37
AL353608.3-202ENST00000429953 HDGFP51858 240 aaKnown RBP17.33■□□□□ 0.36
AL353608.3-202ENST00000429953 PPP4R2Q9NY27 417 aa17.33■□□□□ 0.36
AL353608.3-202ENST00000429953 CCER2I3L3R5 266 aa17.32■□□□□ 0.36
AL353608.3-202ENST00000429953 LRRC9Q6ZRR7 1453 aa17.32■□□□□ 0.36
AL353608.3-202ENST00000429953 ST20-MTHFSA0A0A6YYL1 179 aa17.31■□□□□ 0.36
AL353608.3-202ENST00000429953 FRAT1Q92837 279 aaPredicted RBP17.31■□□□□ 0.36
AL353608.3-202ENST00000429953 TRAK1Q9UPV9 953 aa17.31■□□□□ 0.36
AL353608.3-202ENST00000429953 NUTM2FA1L443 756 aa17.31■□□□□ 0.36
AL353608.3-202ENST00000429953 MYOM3Q5VTT5 1437 aa17.3■□□□□ 0.36
AL353608.3-202ENST00000429953 AFAP1Q8N556 730 aa17.29■□□□□ 0.36
AL353608.3-202ENST00000429953 ARXQ96QS3 562 aa17.29■□□□□ 0.36
AL353608.3-202ENST00000429953 FAM69CQ0P6D2 419 aa17.29■□□□□ 0.36
AL353608.3-202ENST00000429953 RTN4Q9NQC3 1192 aaKnown RBP17.28■□□□□ 0.36
AL353608.3-202ENST00000429953 PRG4Q92954 1404 aaPredicted RBP17.28■□□□□ 0.36
AL353608.3-202ENST00000429953 CASKIN1Q8WXD9 1431 aa17.27■□□□□ 0.36
AL353608.3-202ENST00000429953 ERICH3Q5RHP9 1530 aa17.27■□□□□ 0.36
AL353608.3-202ENST00000429953 CCDC144AA2RUR9 1427 aa17.27■□□□□ 0.35
AL353608.3-202ENST00000429953 RBM19Q9Y4C8 960 aaKnown RBP17.26■□□□□ 0.35
AL353608.3-202ENST00000429953 NCOA2Q15596 1464 aa17.26■□□□□ 0.35
AL353608.3-202ENST00000429953 SNAPC4Q5SXM2 1469 aa17.25■□□□□ 0.35
AL353608.3-202ENST00000429953 IFT140Q96RY7 1462 aa17.24■□□□□ 0.35
AL353608.3-202ENST00000429953 UNC13AQ9UPW8 1703 aa17.24■□□□□ 0.35
AL353608.3-202ENST00000429953 MYH16Q9H6N6 1097 aa17.23■□□□□ 0.35
AL353608.3-202ENST00000429953 KTN1Q86UP2 1357 aaKnown RBP17.23■□□□□ 0.35
AL353608.3-202ENST00000429953 KIF15Q9NS87 1388 aa17.23■□□□□ 0.35
AL353608.3-202ENST00000429953 FTSJ3Q8IY81 847 aaKnown RBP17.23■□□□□ 0.35
AL353608.3-202ENST00000429953 PAK3O75914 559 aaPredicted RBP17.22■□□□□ 0.35
AL353608.3-202ENST00000429953 DNMBPQ6XZF7 1577 aa17.21■□□□□ 0.35
AL353608.3-202ENST00000429953 HDGFL2Q7Z4V5 671 aaPredicted RBP17.2■□□□□ 0.34
AL353608.3-202ENST00000429953 U2AF1L5P0DN76 240 aaPredicted RBP17.19■□□□□ 0.34
AL353608.3-202ENST00000429953 U2AF1Q01081 240 aaKnown RBP eCLIP17.19■□□□□ 0.34
AL353608.3-202ENST00000429953 RGS3P49796 1198 aa17.18■□□□□ 0.34
AL353608.3-202ENST00000429953 ANKRD50Q9ULJ7 1429 aa17.15■□□□□ 0.34
AL353608.3-202ENST00000429953 DEKP35659 375 aaKnown RBP17.15■□□□□ 0.34
AL353608.3-202ENST00000429953 FYCO1Q9BQS8 1478 aa17.14■□□□□ 0.33
AL353608.3-202ENST00000429953 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.14■□□□□ 0.33
AL353608.3-202ENST00000429953 NOP58Q9Y2X3 529 aaKnown RBP17.14■□□□□ 0.33
AL353608.3-202ENST00000429953 EID1Q9Y6B2 187 aa17.14■□□□□ 0.33
AL353608.3-202ENST00000429953 PANK3Q9H999 370 aa17.14■□□□□ 0.33
AL353608.3-202ENST00000429953 ANP32BQ92688 251 aaKnown RBP17.13■□□□□ 0.33
AL353608.3-202ENST00000429953 SYNJ2O15056 1496 aa17.12■□□□□ 0.33
AL353608.3-202ENST00000429953 CCDC146Q8IYE0 955 aa17.12■□□□□ 0.33
AL353608.3-202ENST00000429953 DDRGK1Q96HY6 314 aa17.12■□□□□ 0.33
AL353608.3-202ENST00000429953 USP47Q96K76 1375 aa17.12■□□□□ 0.33
AL353608.3-202ENST00000429953 ABCA10Q8WWZ4 1543 aa17.12■□□□□ 0.33
AL353608.3-202ENST00000429953 RALBP1Q15311 655 aa17.12■□□□□ 0.33
AL353608.3-202ENST00000429953 EIF3AQ14152 1382 aaKnown RBP17.11■□□□□ 0.33
AL353608.3-202ENST00000429953 UACAQ9BZF9 1416 aa17.1■□□□□ 0.33
AL353608.3-202ENST00000429953 MINK1Q8N4C8 1332 aaPredicted RBP17.1■□□□□ 0.33
AL353608.3-202ENST00000429953 LAMC3Q9Y6N6 1575 aa17.1■□□□□ 0.33
AL353608.3-202ENST00000429953 VGFO15240 615 aaPredicted RBP17.09■□□□□ 0.33
AL353608.3-202ENST00000429953 NGDNQ8NEJ9 315 aaKnown RBP17.08■□□□□ 0.33
AL353608.3-202ENST00000429953 ARHGAP5Q13017 1502 aa17.08■□□□□ 0.33
AL353608.3-202ENST00000429953 URB2Q14146 1524 aaKnown RBP17.08■□□□□ 0.33
AL353608.3-202ENST00000429953 NLRP13Q86W25 1043 aa17.08■□□□□ 0.32
AL353608.3-202ENST00000429953 TERF2IPQ9NYB0 399 aa17.08■□□□□ 0.32
AL353608.3-202ENST00000429953 ZNF608Q9ULD9 1512 aaPredicted RBP17.07■□□□□ 0.32
AL353608.3-202ENST00000429953 PEG3Q9GZU2 1588 aa17.07■□□□□ 0.32
AL353608.3-202ENST00000429953 CDK13Q14004 1512 aaKnown RBP17.07■□□□□ 0.32
AL353608.3-202ENST00000429953 RRBP1Q9P2E9 1410 aaKnown RBP17.06■□□□□ 0.32
AL353608.3-202ENST00000429953 PRKRIP1Q9H875 184 aaPredicted RBP17.05■□□□□ 0.32
AL353608.3-202ENST00000429953 EFCAB5A4FU69 1503 aa17.05■□□□□ 0.32
AL353608.3-202ENST00000429953 RAPGEF3O95398 923 aa17.05■□□□□ 0.32
AL353608.3-202ENST00000429953 PNNQ9H307 717 aaKnown RBP17.05■□□□□ 0.32
AL353608.3-202ENST00000429953 TMEM132EQ6IEE7 984 aa17.05■□□□□ 0.32
AL353608.3-202ENST00000429953 TROQ12816 1431 aaPredicted RBP17.04■□□□□ 0.32
AL353608.3-202ENST00000429953 BECN1Q14457 450 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms