RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 GCC2Q8IWJ2 1684 aa20.93■□□□□ 0.94
LINC00839-202ENST00000429940 HECW1Q76N89 1606 aa20.92■□□□□ 0.94
LINC00839-202ENST00000429940 MAGI3Q5TCQ9 1506 aa20.92■□□□□ 0.94
LINC00839-202ENST00000429940 RRP7BPQ9NSQ0 103 aa20.9■□□□□ 0.94
LINC00839-202ENST00000429940 TCOF1Q13428 1488 aaKnown RBP20.9■□□□□ 0.94
LINC00839-202ENST00000429940 HNRNPUQ00839 825 aaKnown RBP eCLIP20.9■□□□□ 0.94
LINC00839-202ENST00000429940 PTPRGP23470 1445 aa20.9■□□□□ 0.94
LINC00839-202ENST00000429940 CDK13Q14004 1512 aaKnown RBP20.89■□□□□ 0.93
LINC00839-202ENST00000429940 WASHC2AQ641Q2 1341 aa20.88■□□□□ 0.93
LINC00839-202ENST00000429940 HSPA5P11021 654 aaKnown RBP20.88■□□□□ 0.93
LINC00839-202ENST00000429940 CHIC2Q9UKJ5 165 aa20.88■□□□□ 0.93
LINC00839-202ENST00000429940 DENND4BO75064 1496 aaPredicted RBP20.87■□□□□ 0.93
LINC00839-202ENST00000429940 RAPGEF6Q8TEU7 1601 aa20.86■□□□□ 0.93
LINC00839-202ENST00000429940 NUP153P49790 1475 aaKnown RBP20.86■□□□□ 0.93
LINC00839-202ENST00000429940 AKNAQ7Z591 1439 aa20.85■□□□□ 0.93
LINC00839-202ENST00000429940 EPRSP07814 1512 aaKnown RBP20.85■□□□□ 0.93
LINC00839-202ENST00000429940 KDM6BO15054 1643 aa20.84■□□□□ 0.93
LINC00839-202ENST00000429940 EIF4G2P78344 907 aaKnown RBP eCLIP20.82■□□□□ 0.92
LINC00839-202ENST00000429940 CNTLNQ9NXG0 1405 aa20.8■□□□□ 0.92
LINC00839-202ENST00000429940 MPHOSPH9Q99550 1183 aa20.78■□□□□ 0.92
LINC00839-202ENST00000429940 ABCA8O94911 1581 aa20.78■□□□□ 0.92
LINC00839-202ENST00000429940 MIA2Q96PC5 1412 aa20.77■□□□□ 0.92
LINC00839-202ENST00000429940 IRX6P78412 446 aaPredicted RBP20.76■□□□□ 0.91
LINC00839-202ENST00000429940 L3MBTL2Q969R5 705 aa20.75■□□□□ 0.91
LINC00839-202ENST00000429940 ATP10BO94823 1461 aa20.72■□□□□ 0.91
LINC00839-202ENST00000429940 NCOA1Q15788 1441 aa20.72■□□□□ 0.91
LINC00839-202ENST00000429940 FOXD1Q16676 465 aa20.71■□□□□ 0.91
LINC00839-202ENST00000429940 CDK11AQ9UQ88 783 aaPredicted RBP20.71■□□□□ 0.91
LINC00839-202ENST00000429940 CCDC7Q96M83 1385 aa20.71■□□□□ 0.91
LINC00839-202ENST00000429940 CCDC184Q52MB2 194 aa20.7■□□□□ 0.9
LINC00839-202ENST00000429940 C11orf95C9JLR9 678 aaPredicted RBP20.69■□□□□ 0.9
LINC00839-202ENST00000429940 ERICH6BQ5W0A0 696 aa20.69■□□□□ 0.9
LINC00839-202ENST00000429940 PRKRIP1Q9H875 184 aaPredicted RBP20.68■□□□□ 0.9
LINC00839-202ENST00000429940 RPRD2Q5VT52 1461 aaKnown RBP20.67■□□□□ 0.9
LINC00839-202ENST00000429940 DAPK1P53355 1430 aa20.65■□□□□ 0.9
LINC00839-202ENST00000429940 ANKRD30BQ9BXX2 1392 aa20.65■□□□□ 0.9
LINC00839-202ENST00000429940 ROCK1Q13464 1354 aa20.65■□□□□ 0.9
LINC00839-202ENST00000429940 MSH5O43196 834 aa20.65■□□□□ 0.9
LINC00839-202ENST00000429940 FAM9BQ8IZU0 186 aa20.64■□□□□ 0.89
LINC00839-202ENST00000429940 FANCIQ9NVI1 1328 aa20.64■□□□□ 0.89
LINC00839-202ENST00000429940 TEX14Q8IWB6 1497 aa20.64■□□□□ 0.89
LINC00839-202ENST00000429940 ABCC2Q92887 1545 aa20.64■□□□□ 0.89
LINC00839-202ENST00000429940 PLEKHD1A6NEE1 506 aa20.64■□□□□ 0.89
LINC00839-202ENST00000429940 MRS2Q9HD23 443 aa20.64■□□□□ 0.89
LINC00839-202ENST00000429940 PPP4R2Q9NY27 417 aa20.64■□□□□ 0.89
LINC00839-202ENST00000429940 NBPF8Q3BBV2 869 aa20.63■□□□□ 0.89
LINC00839-202ENST00000429940 DNMT1P26358 1616 aaKnown RBP20.63■□□□□ 0.89
LINC00839-202ENST00000429940 POLR1AO95602 1720 aaPredicted RBP20.62■□□□□ 0.89
LINC00839-202ENST00000429940 ZBED9Q6R2W3 1325 aa20.61■□□□□ 0.89
LINC00839-202ENST00000429940 CYB5RLQ6IPT4 315 aa20.6■□□□□ 0.89
LINC00839-202ENST00000429940 ABCC5O15440 1437 aa20.6■□□□□ 0.89
LINC00839-202ENST00000429940 ADCY10Q96PN6 1610 aa20.6■□□□□ 0.89
LINC00839-202ENST00000429940 KIF7Q2M1P5 1343 aa20.58■□□□□ 0.89
LINC00839-202ENST00000429940 TROQ12816 1431 aaPredicted RBP20.58■□□□□ 0.89
LINC00839-202ENST00000429940 SPATA31E1Q6ZUB1 1445 aa20.58■□□□□ 0.89
LINC00839-202ENST00000429940 KIF14Q15058 1648 aa20.58■□□□□ 0.89
LINC00839-202ENST00000429940 SLC4A1APQ9BWU0 796 aaKnown RBP20.57■□□□□ 0.88
LINC00839-202ENST00000429940 ZCCHC11Q5TAX3 1644 aaKnown RBP20.55■□□□□ 0.88
LINC00839-202ENST00000429940 ZNF644Q9H582 1327 aaPredicted RBP20.54■□□□□ 0.88
LINC00839-202ENST00000429940 UHRF1BP1LA0JNW5 1464 aa20.54■□□□□ 0.88
LINC00839-202ENST00000429940 RIMBP3CA6NJZ7 1639 aa20.54■□□□□ 0.88
LINC00839-202ENST00000429940 RIMBP3BA6NNM3 1639 aa20.54■□□□□ 0.88
LINC00839-202ENST00000429940 RIMBP3Q9UFD9 1639 aa20.54■□□□□ 0.88
LINC00839-202ENST00000429940 ERICH6Q7L0X2 663 aa20.51■□□□□ 0.87
LINC00839-202ENST00000429940 BCL11AQ9H165 835 aa20.51■□□□□ 0.87
LINC00839-202ENST00000429940 B4GALNT3Q6L9W6 998 aa20.49■□□□□ 0.87
LINC00839-202ENST00000429940 PZPP20742 1482 aa20.49■□□□□ 0.87
LINC00839-202ENST00000429940 ZNF777Q9ULD5 760 aaPredicted RBP20.48■□□□□ 0.87
LINC00839-202ENST00000429940 ADGBQ8N7X0 1667 aa20.46■□□□□ 0.87
LINC00839-202ENST00000429940 MBD5Q9P267 1494 aa20.45■□□□□ 0.86
LINC00839-202ENST00000429940 CAMSAP2Q08AD1 1489 aa20.45■□□□□ 0.86
LINC00839-202ENST00000429940 CFDP1Q9UEE9 299 aaPredicted RBP20.44■□□□□ 0.86
LINC00839-202ENST00000429940 NPM1P06748 294 aaKnown RBP eCLIP20.44■□□□□ 0.86
LINC00839-202ENST00000429940 GPATCH8Q9UKJ3 1502 aaKnown RBP20.44■□□□□ 0.86
LINC00839-202ENST00000429940 DHX29Q7Z478 1369 aaKnown RBP20.43■□□□□ 0.86
LINC00839-202ENST00000429940 ITSN2Q9NZM3 1697 aa20.43■□□□□ 0.86
LINC00839-202ENST00000429940 ABCC10Q5T3U5 1492 aa20.42■□□□□ 0.86
LINC00839-202ENST00000429940 SMG6Q86US8 1419 aaKnown RBP20.42■□□□□ 0.86
LINC00839-202ENST00000429940 BCORL1Q5H9F3 1711 aa20.42■□□□□ 0.86
LINC00839-202ENST00000429940 KIAA1107Q9UPP5 1409 aa20.41■□□□□ 0.86
LINC00839-202ENST00000429940 USP47Q96K76 1375 aa20.41■□□□□ 0.86
LINC00839-202ENST00000429940 CDC42BPAQ5VT25 1732 aa20.4■□□□□ 0.86
LINC00839-202ENST00000429940 ASXL2Q76L83 1435 aa20.39■□□□□ 0.86
LINC00839-202ENST00000429940 TTC37Q6PGP7 1564 aa20.39■□□□□ 0.86
LINC00839-202ENST00000429940 POLR3GLQ9BT43 218 aa20.39■□□□□ 0.85
LINC00839-202ENST00000429940 CROCC2H7BZ55 1655 aa20.39■□□□□ 0.85
LINC00839-202ENST00000429940 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.39■□□□□ 0.85
LINC00839-202ENST00000429940 CNGB1Q14028 1251 aaPredicted RBP20.38■□□□□ 0.85
LINC00839-202ENST00000429940 ZNF326Q5BKZ1 582 aaKnown RBP20.38■□□□□ 0.85
LINC00839-202ENST00000429940 KDM5CP41229 1560 aa20.38■□□□□ 0.85
LINC00839-202ENST00000429940 ADGRL2O95490 1459 aa20.37■□□□□ 0.85
LINC00839-202ENST00000429940 WDR7Q9Y4E6 1490 aa20.36■□□□□ 0.85
LINC00839-202ENST00000429940 NUDCQ9Y266 331 aa20.36■□□□□ 0.85
LINC00839-202ENST00000429940 ARID4BQ4LE39 1312 aaPredicted RBP20.35■□□□□ 0.85
LINC00839-202ENST00000429940 PKD2Q13563 968 aa20.35■□□□□ 0.85
LINC00839-202ENST00000429940 CDC42BPBQ9Y5S2 1711 aa20.33■□□□□ 0.85
LINC00839-202ENST00000429940 ANKRD30AQ9BXX3 1397 aa20.32■□□□□ 0.84
LINC00839-202ENST00000429940 HNRNPMP52272 730 aaKnown RBP eCLIP20.31■□□□□ 0.84
LINC00839-202ENST00000429940 RNF123Q5XPI4 1314 aa20.31■□□□□ 0.84
LINC00839-202ENST00000429940 ROCK2O75116 1388 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms