RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 GPATCH8Q9UKJ3 1502 aaKnown RBP23.35■■□□□ 1.33
MBD4-203ENST00000429544 TONSLQ96HA7 1378 aa23.35■■□□□ 1.33
MBD4-203ENST00000429544 ATP10BO94823 1461 aa23.35■■□□□ 1.33
MBD4-203ENST00000429544 ROCK1Q13464 1354 aa23.34■■□□□ 1.33
MBD4-203ENST00000429544 TRIM52Q96A61 297 aa23.34■■□□□ 1.33
MBD4-203ENST00000429544 PPP1R15AO75807 674 aaPredicted RBP23.34■■□□□ 1.33
MBD4-203ENST00000429544 CFDP1Q9UEE9 299 aaPredicted RBP23.33■■□□□ 1.33
MBD4-203ENST00000429544 YTHDC1Q96MU7 727 aaKnown RBP23.32■■□□□ 1.32
MBD4-203ENST00000429544 PTPRGP23470 1445 aa23.31■■□□□ 1.32
MBD4-203ENST00000429544 DENND4BO75064 1496 aaPredicted RBP23.31■■□□□ 1.32
MBD4-203ENST00000429544 SHROOM2Q13796 1616 aa23.3■■□□□ 1.32
MBD4-203ENST00000429544 CDC42BPAQ5VT25 1732 aa23.3■■□□□ 1.32
MBD4-203ENST00000429544 PLEKHD1A6NEE1 506 aa23.3■■□□□ 1.32
MBD4-203ENST00000429544 ADGBQ8N7X0 1667 aa23.28■■□□□ 1.32
MBD4-203ENST00000429544 CROCC2H7BZ55 1655 aa23.28■■□□□ 1.32
MBD4-203ENST00000429544 ZNF777Q9ULD5 760 aaPredicted RBP23.27■■□□□ 1.32
MBD4-203ENST00000429544 ABCC10Q5T3U5 1492 aa23.26■■□□□ 1.31
MBD4-203ENST00000429544 MPHOSPH9Q99550 1183 aa23.23■■□□□ 1.31
MBD4-203ENST00000429544 KDM5BQ9UGL1 1544 aa23.21■■□□□ 1.31
MBD4-203ENST00000429544 ERCC6L2Q5T890 1561 aa23.2■■□□□ 1.31
MBD4-203ENST00000429544 ADGRL2O95490 1459 aa23.18■■□□□ 1.3
MBD4-203ENST00000429544 NCOA1Q15788 1441 aa23.18■■□□□ 1.3
MBD4-203ENST00000429544 FOXD1Q16676 465 aa23.16■■□□□ 1.3
MBD4-203ENST00000429544 HIRIP3Q9BW71 556 aaPredicted RBP23.15■■□□□ 1.3
MBD4-203ENST00000429544 CLASP1Q7Z460 1538 aa23.12■■□□□ 1.29
MBD4-203ENST00000429544 ANKRD30AQ9BXX3 1397 aa23.12■■□□□ 1.29
MBD4-203ENST00000429544 ABCC2Q92887 1545 aa23.1■■□□□ 1.29
MBD4-203ENST00000429544 CDC42BPBQ9Y5S2 1711 aa23.1■■□□□ 1.29
MBD4-203ENST00000429544 PREX2Q70Z35 1606 aa23.1■■□□□ 1.29
MBD4-203ENST00000429544 SHANK2Q9UPX8 1470 aa23.1■■□□□ 1.29
MBD4-203ENST00000429544 DDX10Q13206 875 aaKnown RBP23.09■■□□□ 1.29
MBD4-203ENST00000429544 SLC4A1APQ9BWU0 796 aaKnown RBP23.09■■□□□ 1.29
MBD4-203ENST00000429544 ANKRD30BQ9BXX2 1392 aa23.09■■□□□ 1.29
MBD4-203ENST00000429544 PZPP20742 1482 aa23.08■■□□□ 1.29
MBD4-203ENST00000429544 C9orf84Q5VXU9 1444 aa23.08■■□□□ 1.29
MBD4-203ENST00000429544 GTF3C3Q9Y5Q9 886 aa23.07■■□□□ 1.28
MBD4-203ENST00000429544 ARHGEF5Q12774 1597 aa23.06■■□□□ 1.28
MBD4-203ENST00000429544 SAMD9LQ8IVG5 1584 aa23.06■■□□□ 1.28
MBD4-203ENST00000429544 TTC37Q6PGP7 1564 aa23.04■■□□□ 1.28
MBD4-203ENST00000429544 RPRD2Q5VT52 1461 aaKnown RBP23.04■■□□□ 1.28
MBD4-203ENST00000429544 ANKRD50Q9ULJ7 1429 aa23.03■■□□□ 1.28
MBD4-203ENST00000429544 HNRNPMP52272 730 aaKnown RBP eCLIP23.02■■□□□ 1.28
MBD4-203ENST00000429544 L3MBTL2Q969R5 705 aa23.01■■□□□ 1.27
MBD4-203ENST00000429544 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.01■■□□□ 1.272e-7■■■□□ 19.1
MBD4-203ENST00000429544 MBD5Q9P267 1494 aa23■■□□□ 1.27
MBD4-203ENST00000429544 TSPY4P0CV99 314 aa23■■□□□ 1.27
MBD4-203ENST00000429544 TSPY10P0CW01 314 aa23■■□□□ 1.27
MBD4-203ENST00000429544 MYO5CQ9NQX4 1742 aa22.98■■□□□ 1.27
MBD4-203ENST00000429544 ZCCHC11Q5TAX3 1644 aaKnown RBP22.98■■□□□ 1.27
MBD4-203ENST00000429544 TEX14Q8IWB6 1497 aa22.98■■□□□ 1.27
MBD4-203ENST00000429544 ARHGAP5Q13017 1502 aa22.98■■□□□ 1.27
MBD4-203ENST00000429544 CCDC141Q6ZP82 1450 aa22.98■■□□□ 1.27
MBD4-203ENST00000429544 KIAA1107Q9UPP5 1409 aa22.96■■□□□ 1.27
MBD4-203ENST00000429544 KIF15Q9NS87 1388 aa22.95■■□□□ 1.26
MBD4-203ENST00000429544 SYCP2Q9BX26 1530 aa22.95■■□□□ 1.26
MBD4-203ENST00000429544 UHRF1BP1LA0JNW5 1464 aa22.93■■□□□ 1.26
MBD4-203ENST00000429544 PKD2Q13563 968 aa22.92■■□□□ 1.26
MBD4-203ENST00000429544 HSPA5P11021 654 aaKnown RBP22.91■■□□□ 1.26
MBD4-203ENST00000429544 NUP155O75694 1391 aa22.91■■□□□ 1.26
MBD4-203ENST00000429544 KCNH8Q96L42 1107 aa22.9■■□□□ 1.26
MBD4-203ENST00000429544 KDM5DQ9BY66 1539 aa22.9■■□□□ 1.26
MBD4-203ENST00000429544 NBPF8Q3BBV2 869 aa22.87■■□□□ 1.25
MBD4-203ENST00000429544 RSPH4AQ5TD94 716 aa22.87■■□□□ 1.25
MBD4-203ENST00000429544 MAST1Q9Y2H9 1570 aa22.87■■□□□ 1.25
MBD4-203ENST00000429544 EIF4G2P78344 907 aaKnown RBP eCLIP22.86■■□□□ 1.25
MBD4-203ENST00000429544 PLEKHH2Q8IVE3 1493 aa22.84■■□□□ 1.25
MBD4-203ENST00000429544 ANP32CO43423 234 aa22.83■■□□□ 1.25
MBD4-203ENST00000429544 PLCH2O75038 1416 aa22.8■■□□□ 1.24
MBD4-203ENST00000429544 WASHC2AQ641Q2 1341 aa22.8■■□□□ 1.24
MBD4-203ENST00000429544 PLXNC1O60486 1568 aa22.79■■□□□ 1.24
MBD4-203ENST00000429544 ARHGEF12Q9NZN5 1544 aa22.79■■□□□ 1.24
MBD4-203ENST00000429544 FAM135AQ9P2D6 1515 aa22.77■■□□□ 1.24
MBD4-203ENST00000429544 UNC13BO14795 1591 aa22.76■■□□□ 1.23
MBD4-203ENST00000429544 ABCC1P33527 1531 aa22.75■■□□□ 1.23
MBD4-203ENST00000429544 CCER2I3L3R5 266 aa22.75■■□□□ 1.23
MBD4-203ENST00000429544 EFCAB2Q5VUJ9 269 aa22.74■■□□□ 1.23
MBD4-203ENST00000429544 ZNF326Q5BKZ1 582 aaKnown RBP22.71■■□□□ 1.23
MBD4-203ENST00000429544 POLR1AO95602 1720 aaPredicted RBP22.71■■□□□ 1.23
MBD4-203ENST00000429544 SPATA31E1Q6ZUB1 1445 aa22.71■■□□□ 1.23
MBD4-203ENST00000429544 DUOX2Q9NRD8 1548 aa22.7■■□□□ 1.22
MBD4-203ENST00000429544 WDR7Q9Y4E6 1490 aa22.7■■□□□ 1.22
MBD4-203ENST00000429544 CCDC7Q96M83 1385 aa22.69■■□□□ 1.22
MBD4-203ENST00000429544 C11orf95C9JLR9 678 aaPredicted RBP22.69■■□□□ 1.22
MBD4-203ENST00000429544 CNTLNQ9NXG0 1405 aa22.68■■□□□ 1.22
MBD4-203ENST00000429544 TRAPPC8Q9Y2L5 1435 aa22.68■■□□□ 1.22
MBD4-203ENST00000429544 ARAP3Q8WWN8 1544 aa22.67■■□□□ 1.22
MBD4-203ENST00000429544 IQGAP3Q86VI3 1631 aa22.67■■□□□ 1.22
MBD4-203ENST00000429544 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.67■■□□□ 1.221e-9■■■□□ 16.7
MBD4-203ENST00000429544 UHRF1BP1Q6BDS2 1440 aa22.65■■□□□ 1.22
MBD4-203ENST00000429544 ERBINQ96RT1 1412 aa22.64■■□□□ 1.21
MBD4-203ENST00000429544 RALGAPBQ86X10 1494 aa22.62■■□□□ 1.21
MBD4-203ENST00000429544 KDM5CP41229 1560 aa22.62■■□□□ 1.21
MBD4-203ENST00000429544 ABCA9Q8IUA7 1624 aa22.62■■□□□ 1.21
MBD4-203ENST00000429544 USP47Q96K76 1375 aa22.61■■□□□ 1.21
MBD4-203ENST00000429544 MAGI2Q86UL8 1455 aa22.61■■□□□ 1.21
MBD4-203ENST00000429544 KIF7Q2M1P5 1343 aa22.6■■□□□ 1.21
MBD4-203ENST00000429544 CCDC144AA2RUR9 1427 aa22.59■■□□□ 1.21
MBD4-203ENST00000429544 BCORL1Q5H9F3 1711 aa22.59■■□□□ 1.21
MBD4-203ENST00000429544 ZFYVE16Q7Z3T8 1539 aa22.59■■□□□ 1.21
MBD4-203ENST00000429544 KDM2AQ9Y2K7 1162 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms