RNA–Protein interactions for RNA: ENST00000429433.3

BEND3-202, Transcript of BEN domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEND3, Length 6,654 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEND3-202ENST00000429433 USP35Q9P2H5 1018 aa13.32□□□□□ -0.28
BEND3-202ENST00000429433 OS9Q13438 667 aaPredicted RBP13.31□□□□□ -0.28
BEND3-202ENST00000429433 CHMP7Q8WUX9 453 aaPredicted RBP13.3□□□□□ -0.28
BEND3-202ENST00000429433 IPO8O15397 1037 aaKnown RBP13.3□□□□□ -0.28
BEND3-202ENST00000429433 SOGA1O94964 1423 aa13.29□□□□□ -0.28
BEND3-202ENST00000429433 GOLGA6L3A6NEY3 463 aa13.29□□□□□ -0.28
BEND3-202ENST00000429433 KIF27Q86VH2 1401 aa13.29□□□□□ -0.28
BEND3-202ENST00000429433 CCNB3Q8WWL7 1395 aa13.28□□□□□ -0.28
BEND3-202ENST00000429433 IPO9Q96P70 1041 aaKnown RBP13.28□□□□□ -0.28
BEND3-202ENST00000429433 FOXD4L1Q9NU39 408 aa13.28□□□□□ -0.28
BEND3-202ENST00000429433 U2SURPO15042 1029 aaKnown RBP13.28□□□□□ -0.28
BEND3-202ENST00000429433 HSPA5P11021 654 aaKnown RBP13.28□□□□□ -0.28
BEND3-202ENST00000429433 RWDD1Q9H446 243 aaPredicted RBP13.28□□□□□ -0.28
BEND3-202ENST00000429433 WRNQ14191 1432 aaPredicted RBP eCLIP13.27□□□□□ -0.28
BEND3-202ENST00000429433 FHAD1B1AJZ9 1412 aa13.27□□□□□ -0.29
BEND3-202ENST00000429433 DCAF11Q8TEB1 546 aa13.27□□□□□ -0.29
BEND3-202ENST00000429433 TNNT3P45378 269 aaPredicted RBP13.26□□□□□ -0.29
BEND3-202ENST00000429433 RSPH6AQ9H0K4 717 aa13.26□□□□□ -0.29
BEND3-202ENST00000429433 KTN1Q86UP2 1357 aaKnown RBP13.24□□□□□ -0.29
BEND3-202ENST00000429433 CALD1Q05682 793 aaKnown RBP13.24□□□□□ -0.29
BEND3-202ENST00000429433 RALBP1Q15311 655 aa13.24□□□□□ -0.29
BEND3-202ENST00000429433 CHMP4AQ9BY43 222 aa13.24□□□□□ -0.29
BEND3-202ENST00000429433 CSPP1Q1MSJ5 1256 aa13.24□□□□□ -0.29
BEND3-202ENST00000429433 PMFBP1Q8TBY8 1022 aa13.24□□□□□ -0.29
BEND3-202ENST00000429433 RCAN3Q9UKA8 241 aa13.24□□□□□ -0.29
BEND3-202ENST00000429433 TPM4P67936 248 aa13.23□□□□□ -0.29
BEND3-202ENST00000429433 KIAA1211Q6ZU35 1233 aa13.23□□□□□ -0.29
BEND3-202ENST00000429433 POGKQ9P215 609 aa13.23□□□□□ -0.29
BEND3-202ENST00000429433 CCDC34Q96HJ3 373 aa13.22□□□□□ -0.29
BEND3-202ENST00000429433 PLIN1O60240 522 aa13.22□□□□□ -0.29
BEND3-202ENST00000429433 PDE3BQ13370 1112 aa13.22□□□□□ -0.29
BEND3-202ENST00000429433 NAP1L2Q9ULW6 460 aaPredicted RBP13.21□□□□□ -0.29
BEND3-202ENST00000429433 GOLGA6L1Q8N7Z2 621 aa13.2□□□□□ -0.3
BEND3-202ENST00000429433 SETD5Q9C0A6 1442 aa13.2□□□□□ -0.3
BEND3-202ENST00000429433 CCDC146Q8IYE0 955 aa13.2□□□□□ -0.3
BEND3-202ENST00000429433 PHF14O94880 888 aa13.19□□□□□ -0.3
BEND3-202ENST00000429433 LMOD2Q6P5Q4 547 aa13.18□□□□□ -0.3
BEND3-202ENST00000429433 ABCC8Q09428 1581 aa13.18□□□□□ -0.3
BEND3-202ENST00000429433 MORC1Q86VD1 984 aa13.18□□□□□ -0.3
BEND3-202ENST00000429433 HSP90AA2PQ14568 343 aaPredicted RBP13.17□□□□□ -0.3
BEND3-202ENST00000429433 CLUAP1Q96AJ1 413 aa13.17□□□□□ -0.3
BEND3-202ENST00000429433 DDX11L8A8MPP1 907 aa13.17□□□□□ -0.3
BEND3-202ENST00000429433 FOXD4L5Q5VV16 416 aaPredicted RBP13.17□□□□□ -0.3
BEND3-202ENST00000429433 FOXD4L4Q8WXT5 416 aaPredicted RBP13.17□□□□□ -0.3
BEND3-202ENST00000429433 HDAC5Q9UQL6 1122 aa13.17□□□□□ -0.3
BEND3-202ENST00000429433 GNL2Q13823 731 aaKnown RBP13.17□□□□□ -0.3
BEND3-202ENST00000429433 GOLGA2Q08379 1002 aa13.16□□□□□ -0.3
BEND3-202ENST00000429433 PHLDB1Q86UU1 1377 aa13.15□□□□□ -0.3
BEND3-202ENST00000429433 RB1CC1Q8TDY2 1594 aa13.15□□□□□ -0.3
BEND3-202ENST00000429433 KANK1Q14678 1352 aa13.15□□□□□ -0.3
BEND3-202ENST00000429433 NOL8Q76FK4 1167 aaKnown RBP13.15□□□□□ -0.3
BEND3-202ENST00000429433 SKOR2Q2VWA4 1001 aaPredicted RBP13.14□□□□□ -0.31
BEND3-202ENST00000429433 NUTM2DQ5VT03 806 aaPredicted RBP13.14□□□□□ -0.31
BEND3-202ENST00000429433 STK26Q9P289 416 aa13.13□□□□□ -0.31
BEND3-202ENST00000429433 HDGFP51858 240 aaKnown RBP13.12□□□□□ -0.31
BEND3-202ENST00000429433 FOXD4L6Q3SYB3 417 aaPredicted RBP13.12□□□□□ -0.31
BEND3-202ENST00000429433 FOXD4L3Q6VB84 417 aaPredicted RBP13.12□□□□□ -0.31
BEND3-202ENST00000429433 ROCK2O75116 1388 aaKnown RBP13.12□□□□□ -0.31
BEND3-202ENST00000429433 HMMRO75330 724 aa13.12□□□□□ -0.31
BEND3-202ENST00000429433 RTF1Q92541 710 aaKnown RBP13.11□□□□□ -0.31
BEND3-202ENST00000429433 MFAP1P55081 439 aaKnown RBP13.11□□□□□ -0.31
BEND3-202ENST00000429433 NOC3LQ8WTT2 800 aaKnown RBP13.11□□□□□ -0.31
BEND3-202ENST00000429433 KIF3AQ9Y496 699 aa13.11□□□□□ -0.31
BEND3-202ENST00000429433 VPS8Q8N3P4 1428 aa13.1□□□□□ -0.31
BEND3-202ENST00000429433 CHMP4CQ96CF2 233 aa13.1□□□□□ -0.31
BEND3-202ENST00000429433 BCL2L13Q9BXK5 485 aa13.1□□□□□ -0.31
BEND3-202ENST00000429433 CECR2Q9BXF3 1484 aa13.1□□□□□ -0.31
BEND3-202ENST00000429433 NACADO15069 1562 aa13.09□□□□□ -0.31
BEND3-202ENST00000429433 BCL11BQ9C0K0 894 aaPredicted RBP13.09□□□□□ -0.31
BEND3-202ENST00000429433 ST18O60284 1047 aa13.09□□□□□ -0.31
BEND3-202ENST00000429433 ITPRIPQ8IWB1 547 aa13.09□□□□□ -0.31
BEND3-202ENST00000429433 RRP7AQ9Y3A4 280 aaKnown RBP13.09□□□□□ -0.31
BEND3-202ENST00000429433 RAB3GAP2Q9H2M9 1393 aa13.09□□□□□ -0.31
BEND3-202ENST00000429433 FANCIQ9NVI1 1328 aa13.08□□□□□ -0.32
BEND3-202ENST00000429433 GSE1Q14687 1217 aa13.08□□□□□ -0.32
BEND3-202ENST00000429433 GPATCH3Q96I76 525 aa13.08□□□□□ -0.32
BEND3-202ENST00000429433 SETQ01105 290 aaPredicted RBP13.08□□□□□ -0.32
BEND3-202ENST00000429433 MLECQ14165 292 aa13.07□□□□□ -0.32
BEND3-202ENST00000429433 HDGFL2Q7Z4V5 671 aaPredicted RBP13.07□□□□□ -0.32
BEND3-202ENST00000429433 ARHGAP35Q9NRY4 1499 aa13.07□□□□□ -0.32
BEND3-202ENST00000429433 NLRP13Q86W25 1043 aa13.07□□□□□ -0.32
BEND3-202ENST00000429433 TPM3P06753 285 aa13.06□□□□□ -0.32
BEND3-202ENST00000429433 ATP6V1DQ9Y5K8 247 aa13.06□□□□□ -0.32
BEND3-202ENST00000429433 GPS2Q13227 327 aa13.06□□□□□ -0.32
BEND3-202ENST00000429433 CENPQQ7L2Z9 268 aaPredicted RBP13.06□□□□□ -0.32
BEND3-202ENST00000429433 PKD2Q13563 968 aa13.05□□□□□ -0.32
BEND3-202ENST00000429433 SRPK2P78362 688 aaKnown RBP13.05□□□□□ -0.32
BEND3-202ENST00000429433 CCDC88BA6NC98 1476 aa13.05□□□□□ -0.32
BEND3-202ENST00000429433 EIF3AQ14152 1382 aaKnown RBP13.05□□□□□ -0.32
BEND3-202ENST00000429433 NPHP1O15259 732 aa13.04□□□□□ -0.32
BEND3-202ENST00000429433 EXOC6Q8TAG9 804 aa13.04□□□□□ -0.32
BEND3-202ENST00000429433 FAM161AQ3B820 660 aa13.04□□□□□ -0.32
BEND3-202ENST00000429433 CENPJQ9HC77 1338 aaPredicted RBP13.03□□□□□ -0.32
BEND3-202ENST00000429433 U2AF1L5P0DN76 240 aaPredicted RBP13.03□□□□□ -0.32
BEND3-202ENST00000429433 U2AF1Q01081 240 aaKnown RBP eCLIP13.03□□□□□ -0.32
BEND3-202ENST00000429433 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.03□□□□□ -0.32
BEND3-202ENST00000429433 STK31Q9BXU1 1019 aa13.03□□□□□ -0.32
BEND3-202ENST00000429433 LMOD3Q0VAK6 560 aa13.02□□□□□ -0.32
BEND3-202ENST00000429433 ANO8Q9HCE9 1232 aaPredicted RBP13.01□□□□□ -0.33
BEND3-202ENST00000429433 SMC4Q9NTJ3 1288 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms