RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 CFDP1Q9UEE9 299 aaPredicted RBP28.71■■■□□ 2.19
CASC4-203ENST00000429162 CDC42BPAQ5VT25 1732 aa28.7■■■□□ 2.19
CASC4-203ENST00000429162 ACIN1Q9UKV3 1341 aaKnown RBP28.68■■■□□ 2.18
CASC4-203ENST00000429162 CROCC2H7BZ55 1655 aa28.68■■■□□ 2.18
CASC4-203ENST00000429162 ADGBQ8N7X0 1667 aa28.68■■■□□ 2.18
CASC4-203ENST00000429162 KDM6BO15054 1643 aa28.68■■■□□ 2.18
CASC4-203ENST00000429162 SIN3AQ96ST3 1273 aa28.67■■■□□ 2.18
CASC4-203ENST00000429162 ZNF644Q9H582 1327 aaPredicted RBP28.67■■■□□ 2.18
CASC4-203ENST00000429162 ERCC6L2Q5T890 1561 aa28.66■■■□□ 2.18
CASC4-203ENST00000429162 ABCC2Q92887 1545 aa28.65■■■□□ 2.18
CASC4-203ENST00000429162 NEUROD1Q13562 356 aa28.64■■■□□ 2.18
CASC4-203ENST00000429162 ADGRL2O95490 1459 aa28.59■■■□□ 2.17
CASC4-203ENST00000429162 SHANK2Q9UPX8 1470 aa28.55■■■□□ 2.16
CASC4-203ENST00000429162 PREX2Q70Z35 1606 aa28.55■■■□□ 2.16
CASC4-203ENST00000429162 TONSLQ96HA7 1378 aa28.54■■■□□ 2.16
CASC4-203ENST00000429162 TRIM52Q96A61 297 aa28.53■■■□□ 2.16
CASC4-203ENST00000429162 ZNF777Q9ULD5 760 aaPredicted RBP28.53■■■□□ 2.16
CASC4-203ENST00000429162 DENND4BO75064 1496 aaPredicted RBP28.52■■■□□ 2.16
CASC4-203ENST00000429162 UHRF1BP1LA0JNW5 1464 aa28.51■■■□□ 2.15
CASC4-203ENST00000429162 NCOA1Q15788 1441 aa28.5■■■□□ 2.15
CASC4-203ENST00000429162 ARHGEF5Q12774 1597 aa28.49■■■□□ 2.15
CASC4-203ENST00000429162 ANKRD30AQ9BXX3 1397 aa28.47■■■□□ 2.15
CASC4-203ENST00000429162 CDC42BPBQ9Y5S2 1711 aa28.46■■■□□ 2.15
CASC4-203ENST00000429162 PPP1R15AO75807 674 aaPredicted RBP28.46■■■□□ 2.15
CASC4-203ENST00000429162 MPHOSPH9Q99550 1183 aa28.45■■■□□ 2.14
CASC4-203ENST00000429162 ZCCHC11Q5TAX3 1644 aaKnown RBP28.45■■■□□ 2.14
CASC4-203ENST00000429162 TTC37Q6PGP7 1564 aa28.44■■■□□ 2.14
CASC4-203ENST00000429162 SAMD9LQ8IVG5 1584 aa28.43■■■□□ 2.14
CASC4-203ENST00000429162 C9orf84Q5VXU9 1444 aa28.42■■■□□ 2.14
CASC4-203ENST00000429162 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.42■■■□□ 2.146e-7■■□□□ 12.8
CASC4-203ENST00000429162 KDM5BQ9UGL1 1544 aa28.41■■■□□ 2.14
CASC4-203ENST00000429162 MYO5CQ9NQX4 1742 aa28.4■■■□□ 2.14
CASC4-203ENST00000429162 CCDC141Q6ZP82 1450 aa28.37■■■□□ 2.13
CASC4-203ENST00000429162 MBD5Q9P267 1494 aa28.36■■■□□ 2.13
CASC4-203ENST00000429162 MIER1Q8N108 512 aa28.36■■■□□ 2.13
CASC4-203ENST00000429162 ARHGAP5Q13017 1502 aa28.35■■■□□ 2.13
CASC4-203ENST00000429162 PZPP20742 1482 aa28.33■■■□□ 2.13
CASC4-203ENST00000429162 ANKRD50Q9ULJ7 1429 aa28.33■■■□□ 2.13
CASC4-203ENST00000429162 TSPY4P0CV99 314 aa28.32■■■□□ 2.12
CASC4-203ENST00000429162 TSPY10P0CW01 314 aa28.32■■■□□ 2.12
CASC4-203ENST00000429162 PLEKHH2Q8IVE3 1493 aa28.31■■■□□ 2.12
CASC4-203ENST00000429162 RSPH4AQ5TD94 716 aa28.3■■■□□ 2.12
CASC4-203ENST00000429162 ANKRD30BQ9BXX2 1392 aa28.29■■■□□ 2.12
CASC4-203ENST00000429162 MAST1Q9Y2H9 1570 aa28.29■■■□□ 2.12
CASC4-203ENST00000429162 SLC4A1APQ9BWU0 796 aaKnown RBP28.29■■■□□ 2.12
CASC4-203ENST00000429162 SYCP2Q9BX26 1530 aa28.29■■■□□ 2.12
CASC4-203ENST00000429162 HNRNPMP52272 730 aaKnown RBP eCLIP28.27■■■□□ 2.12
CASC4-203ENST00000429162 RPRD2Q5VT52 1461 aaKnown RBP28.27■■■□□ 2.12
CASC4-203ENST00000429162 KDM5DQ9BY66 1539 aa28.25■■■□□ 2.11
CASC4-203ENST00000429162 KIF15Q9NS87 1388 aa28.25■■■□□ 2.11
CASC4-203ENST00000429162 KIAA1107Q9UPP5 1409 aa28.24■■■□□ 2.11
CASC4-203ENST00000429162 CENPBP07199 599 aaPredicted RBP28.24■■■□□ 2.11
CASC4-203ENST00000429162 FOXD1Q16676 465 aa28.22■■■□□ 2.11
CASC4-203ENST00000429162 PLCH2O75038 1416 aa28.21■■■□□ 2.11
CASC4-203ENST00000429162 KCNH8Q96L42 1107 aa28.18■■■□□ 2.1
CASC4-203ENST00000429162 PLXNC1O60486 1568 aa28.18■■■□□ 2.1
CASC4-203ENST00000429162 ARAP3Q8WWN8 1544 aa28.17■■■□□ 2.1
CASC4-203ENST00000429162 TEX14Q8IWB6 1497 aa28.16■■■□□ 2.1
CASC4-203ENST00000429162 WDR7Q9Y4E6 1490 aa28.15■■■□□ 2.1
CASC4-203ENST00000429162 ABCC1P33527 1531 aa28.14■■■□□ 2.09
CASC4-203ENST00000429162 NUP155O75694 1391 aa28.12■■■□□ 2.09
CASC4-203ENST00000429162 EFCAB2Q5VUJ9 269 aa28.1■■■□□ 2.09
CASC4-203ENST00000429162 OSCARQ8IYS5 282 aa28.1■■■□□ 2.09
CASC4-203ENST00000429162 L3MBTL2Q969R5 705 aa28.1■■■□□ 2.09
CASC4-203ENST00000429162 ARHGEF12Q9NZN5 1544 aa28.08■■■□□ 2.09
CASC4-203ENST00000429162 PKD2Q13563 968 aa28.08■■■□□ 2.09
CASC4-203ENST00000429162 UNC13BO14795 1591 aa28.07■■■□□ 2.08
CASC4-203ENST00000429162 ABCA9Q8IUA7 1624 aa28.05■■■□□ 2.08
CASC4-203ENST00000429162 DUOX2Q9NRD8 1548 aa28.04■■■□□ 2.08
CASC4-203ENST00000429162 YTHDC1Q96MU7 727 aaKnown RBP28.02■■■□□ 2.08
CASC4-203ENST00000429162 FAM135AQ9P2D6 1515 aa28.01■■■□□ 2.08
CASC4-203ENST00000429162 HIRIP3Q9BW71 556 aaPredicted RBP28■■■□□ 2.07
CASC4-203ENST00000429162 DDX10Q13206 875 aaKnown RBP27.99■■■□□ 2.07
CASC4-203ENST00000429162 ERBINQ96RT1 1412 aa27.98■■■□□ 2.07
CASC4-203ENST00000429162 ASXL2Q76L83 1435 aa27.97■■■□□ 2.07
CASC4-203ENST00000429162 IQGAP3Q86VI3 1631 aa27.95■■■□□ 2.07
CASC4-203ENST00000429162 TRAPPC8Q9Y2L5 1435 aa27.95■■■□□ 2.06
CASC4-203ENST00000429162 EIF4G2P78344 907 aaKnown RBP eCLIP27.93■■■□□ 2.06
CASC4-203ENST00000429162 MAGI2Q86UL8 1455 aa27.93■■■□□ 2.06
CASC4-203ENST00000429162 RTEL1-TNFRSF6BF6WH68 1400 aa27.92■■■□□ 2.06
CASC4-203ENST00000429162 FANCAO15360 1455 aa27.92■■■□□ 2.06
CASC4-203ENST00000429162 ZFYVE16Q7Z3T8 1539 aa27.91■■■□□ 2.06
CASC4-203ENST00000429162 HSPA5P11021 654 aaKnown RBP27.91■■■□□ 2.06
CASC4-203ENST00000429162 SCAF1Q9H7N4 1312 aaKnown RBP27.9■■■□□ 2.06
CASC4-203ENST00000429162 NBPF8Q3BBV2 869 aa27.89■■■□□ 2.06
CASC4-203ENST00000429162 NPM1P06748 294 aaKnown RBP eCLIP27.86■■■□□ 2.05
CASC4-203ENST00000429162 INO80Q9ULG1 1556 aaPredicted RBP27.85■■■□□ 2.05
CASC4-203ENST00000429162 SPAG9O60271 1321 aaKnown RBP27.85■■■□□ 2.05
CASC4-203ENST00000429162 ADGRL1O94910 1474 aa27.82■■■□□ 2.04
CASC4-203ENST00000429162 UHRF1BP1Q6BDS2 1440 aa27.82■■■□□ 2.04
CASC4-203ENST00000429162 ATP7AQ04656 1500 aa27.81■■■□□ 2.04
CASC4-203ENST00000429162 CFAP74Q9C0B2 1584 aa27.8■■■□□ 2.04
CASC4-203ENST00000429162 CCDC144AA2RUR9 1427 aa27.78■■■□□ 2.04
CASC4-203ENST00000429162 POLR1AO95602 1720 aaPredicted RBP27.77■■■□□ 2.04
CASC4-203ENST00000429162 SPATA31E1Q6ZUB1 1445 aa27.77■■■□□ 2.04
CASC4-203ENST00000429162 ANP32CO43423 234 aa27.77■■■□□ 2.04
CASC4-203ENST00000429162 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.77■■■□□ 2.04
CASC4-203ENST00000429162 RALGAPBQ86X10 1494 aa27.76■■■□□ 2.03
CASC4-203ENST00000429162 AFAP1Q8N556 730 aa27.76■■■□□ 2.03
CASC4-203ENST00000429162 SCAPERQ9BY12 1400 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms