RNA–Protein interactions for RNA: ENST00000428012.1

KDM5C-206, Transcript of lysine demethylase 5C, humanhuman

TSL 3

Gene KDM5C, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-206ENST00000428012 PLCH2O75038 1416 aa23.77■■□□□ 1.4
KDM5C-206ENST00000428012 EEA1Q15075 1411 aa23.77■■□□□ 1.4
KDM5C-206ENST00000428012 CERKQ8TCT0 537 aa23.77■■□□□ 1.4
KDM5C-206ENST00000428012 ARHGEF12Q9NZN5 1544 aa23.73■■□□□ 1.39
KDM5C-206ENST00000428012 ATP10AO60312 1499 aa23.71■■□□□ 1.39
KDM5C-206ENST00000428012 CEBPAP49715 358 aaPredicted RBP23.71■■□□□ 1.39
KDM5C-206ENST00000428012 C9orf84Q5VXU9 1444 aa23.67■■□□□ 1.38
KDM5C-206ENST00000428012 KIF14Q15058 1648 aa23.65■■□□□ 1.38
KDM5C-206ENST00000428012 PREX1Q8TCU6 1659 aa23.64■■□□□ 1.38
KDM5C-206ENST00000428012 EFCAB2Q5VUJ9 269 aa23.64■■□□□ 1.37
KDM5C-206ENST00000428012 STRCQ7RTU9 1775 aa23.64■■□□□ 1.37
KDM5C-206ENST00000428012 MYO5CQ9NQX4 1742 aa23.64■■□□□ 1.37
KDM5C-206ENST00000428012 EHMT2Q96KQ7 1210 aa23.63■■□□□ 1.37
KDM5C-206ENST00000428012 AFAP1Q8N556 730 aa23.62■■□□□ 1.37
KDM5C-206ENST00000428012 ATP1B4Q9UN42 357 aaPredicted RBP23.62■■□□□ 1.37
KDM5C-206ENST00000428012 ARHGAP35Q9NRY4 1499 aa23.59■■□□□ 1.37
KDM5C-206ENST00000428012 KDM5CP41229 1560 aa23.58■■□□□ 1.37
KDM5C-206ENST00000428012 ZNF518AQ6AHZ1 1483 aa23.56■■□□□ 1.36
KDM5C-206ENST00000428012 FMN1Q68DA7 1419 aa23.56■■□□□ 1.36
KDM5C-206ENST00000428012 LRRIQ1Q96JM4 1722 aa23.56■■□□□ 1.36
KDM5C-206ENST00000428012 ILDR2Q71H61 639 aa23.55■■□□□ 1.36
KDM5C-206ENST00000428012 DIP2CQ9Y2E4 1556 aa23.55■■□□□ 1.36
KDM5C-206ENST00000428012 SETD1BQ9UPS6 1966 aaKnown RBP23.54■■□□□ 1.36
KDM5C-206ENST00000428012 TROQ12816 1431 aaPredicted RBP23.54■■□□□ 1.36
KDM5C-206ENST00000428012 ARHGAP5Q13017 1502 aa23.54■■□□□ 1.36
KDM5C-206ENST00000428012 UBTFP17480 764 aaKnown RBP23.52■■□□□ 1.36
KDM5C-206ENST00000428012 CDK11AQ9UQ88 783 aaPredicted RBP23.51■■□□□ 1.35
KDM5C-206ENST00000428012 ABCA6Q8N139 1617 aa23.51■■□□□ 1.35
KDM5C-206ENST00000428012 UHRF1BP1Q6BDS2 1440 aa23.5■■□□□ 1.35
KDM5C-206ENST00000428012 CDC42BPBQ9Y5S2 1711 aa23.5■■□□□ 1.35
KDM5C-206ENST00000428012 C3P01024 1663 aa23.49■■□□□ 1.35
KDM5C-206ENST00000428012 TRAPPC8Q9Y2L5 1435 aa23.48■■□□□ 1.35
KDM5C-206ENST00000428012 REREQ9P2R6 1566 aa23.48■■□□□ 1.35
KDM5C-206ENST00000428012 DMRT2Q9Y5R5 561 aa23.47■■□□□ 1.35
KDM5C-206ENST00000428012 DISP3Q9P2K9 1392 aa23.46■■□□□ 1.35
KDM5C-206ENST00000428012 MLH3Q9UHC1 1453 aa23.46■■□□□ 1.35
KDM5C-206ENST00000428012 MYT1LQ9UL68 1186 aa23.46■■□□□ 1.35
KDM5C-206ENST00000428012 PTPRTO14522 1441 aa23.43■■□□□ 1.34
KDM5C-206ENST00000428012 CLIP1P30622 1438 aa23.43■■□□□ 1.34
KDM5C-206ENST00000428012 ABCC1P33527 1531 aa23.42■■□□□ 1.34
KDM5C-206ENST00000428012 AGLP35573 1532 aa23.42■■□□□ 1.34
KDM5C-206ENST00000428012 PREX2Q70Z35 1606 aa23.41■■□□□ 1.34
KDM5C-206ENST00000428012 LTBP4Q8N2S1 1624 aa23.41■■□□□ 1.34
KDM5C-206ENST00000428012 KIDINS220Q9ULH0 1771 aa23.4■■□□□ 1.34
KDM5C-206ENST00000428012 ITSN2Q9NZM3 1697 aa23.39■■□□□ 1.34
KDM5C-206ENST00000428012 SOCS7O14512 581 aa23.36■■□□□ 1.33
KDM5C-206ENST00000428012 NCOA1Q15788 1441 aa23.35■■□□□ 1.33
KDM5C-206ENST00000428012 CDC42BPAQ5VT25 1732 aa23.33■■□□□ 1.33
KDM5C-206ENST00000428012 ESF1Q9H501 851 aaKnown RBP23.31■■□□□ 1.32
KDM5C-206ENST00000428012 CASKIN1Q8WXD9 1431 aa23.31■■□□□ 1.32
KDM5C-206ENST00000428012 SAMD9LQ8IVG5 1584 aa23.3■■□□□ 1.32
KDM5C-206ENST00000428012 SPATA31D1Q6ZQQ2 1576 aa23.29■■□□□ 1.32
KDM5C-206ENST00000428012 CNTLNQ9NXG0 1405 aa23.28■■□□□ 1.32
KDM5C-206ENST00000428012 CHIC1Q5VXU3 224 aa23.28■■□□□ 1.32
KDM5C-206ENST00000428012 CAMSAP1Q5T5Y3 1602 aa23.27■■□□□ 1.32
KDM5C-206ENST00000428012 CCDC18Q5T9S5 1454 aa23.27■■□□□ 1.32
KDM5C-206ENST00000428012 ZMYM3Q14202 1370 aa23.26■■□□□ 1.31
KDM5C-206ENST00000428012 NCKAP5LQ9HCH0 1330 aa23.25■■□□□ 1.31
KDM5C-206ENST00000428012 HNRNPMP52272 730 aaKnown RBP eCLIP23.24■■□□□ 1.31
KDM5C-206ENST00000428012 ZNF777Q9ULD5 760 aaPredicted RBP23.24■■□□□ 1.31
KDM5C-206ENST00000428012 MROH2AA6NES4 1674 aa23.24■■□□□ 1.31
KDM5C-206ENST00000428012 NPATQ14207 1427 aa23.24■■□□□ 1.31
KDM5C-206ENST00000428012 IQSEC2Q5JU85 1478 aa23.24■■□□□ 1.31
KDM5C-206ENST00000428012 SYCP2Q9BX26 1530 aa23.23■■□□□ 1.31
KDM5C-206ENST00000428012 SUPT6HQ7KZ85 1726 aaKnown RBP23.23■■□□□ 1.31
KDM5C-206ENST00000428012 ZNF335Q9H4Z2 1342 aaPredicted RBP23.22■■□□□ 1.31
KDM5C-206ENST00000428012 GPATCH8Q9UKJ3 1502 aaKnown RBP23.22■■□□□ 1.31
KDM5C-206ENST00000428012 SPAG9O60271 1321 aaKnown RBP23.2■■□□□ 1.3
KDM5C-206ENST00000428012 CLTCQ00610 1675 aaKnown RBP23.19■■□□□ 1.3
KDM5C-206ENST00000428012 PLXNC1O60486 1568 aa23.17■■□□□ 1.3
KDM5C-206ENST00000428012 ATP7AQ04656 1500 aa23.16■■□□□ 1.3
KDM5C-206ENST00000428012 FYCO1Q9BQS8 1478 aa23.16■■□□□ 1.3
KDM5C-206ENST00000428012 PTPRKQ15262 1439 aa23.15■■□□□ 1.3
KDM5C-206ENST00000428012 MYO3AQ8NEV4 1616 aa23.15■■□□□ 1.3
KDM5C-206ENST00000428012 INO80Q9ULG1 1556 aaPredicted RBP23.14■■□□□ 1.3
KDM5C-206ENST00000428012 ZNF142P52746 1687 aaPredicted RBP23.14■■□□□ 1.29
KDM5C-206ENST00000428012 A2MP01023 1474 aa23.13■■□□□ 1.29
KDM5C-206ENST00000428012 TCOF1Q13428 1488 aaKnown RBP23.12■■□□□ 1.29
KDM5C-206ENST00000428012 KIAA1107Q9UPP5 1409 aa23.12■■□□□ 1.29
KDM5C-206ENST00000428012 CEP170BQ9Y4F5 1589 aaPredicted RBP23.11■■□□□ 1.29
KDM5C-206ENST00000428012 UBAP1LF5GYI3 381 aa23.11■■□□□ 1.29
KDM5C-206ENST00000428012 GGT6Q6P531 493 aa23.11■■□□□ 1.29
KDM5C-206ENST00000428012 PLA2R1Q13018 1463 aa23.11■■□□□ 1.29
KDM5C-206ENST00000428012 PKD2Q13563 968 aa23.09■■□□□ 1.29
KDM5C-206ENST00000428012 CFDP1Q9UEE9 299 aaPredicted RBP23.09■■□□□ 1.29
KDM5C-206ENST00000428012 ZNF644Q9H582 1327 aaPredicted RBP23.08■■□□□ 1.28
KDM5C-206ENST00000428012 CCNB3Q8WWL7 1395 aa23.05■■□□□ 1.28
KDM5C-206ENST00000428012 PLEKHH2Q8IVE3 1493 aa23.05■■□□□ 1.28
KDM5C-206ENST00000428012 DNMT1P26358 1616 aaKnown RBP23.01■■□□□ 1.27
KDM5C-206ENST00000428012 ADGBQ8N7X0 1667 aa23.01■■□□□ 1.27
KDM5C-206ENST00000428012 MBD5Q9P267 1494 aa23.01■■□□□ 1.27
KDM5C-206ENST00000428012 PPP6R1Q9UPN7 881 aa23.01■■□□□ 1.27
KDM5C-206ENST00000428012 A2ML1A8K2U0 1454 aa23■■□□□ 1.27
KDM5C-206ENST00000428012 TIAM1Q13009 1591 aa22.98■■□□□ 1.27
KDM5C-206ENST00000428012 FBXO31Q5XUX0 539 aaPredicted RBP22.98■■□□□ 1.27
KDM5C-206ENST00000428012 MTUS2Q5JR59 1369 aa22.97■■□□□ 1.27
KDM5C-206ENST00000428012 NEURL4Q96JN8 1562 aa22.96■■□□□ 1.27
KDM5C-206ENST00000428012 HSPA1LP34931 641 aa22.95■■□□□ 1.26
KDM5C-206ENST00000428012 DHX29Q7Z478 1369 aaKnown RBP22.94■■□□□ 1.26
KDM5C-206ENST00000428012 RTEL1-TNFRSF6BF6WH68 1400 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms