RNA–Protein interactions for RNA: ENST00000427978.6

TRPM4-202, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best) BASIC

Gene TRPM4, Length 3,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-202ENST00000427978 EPRSP07814 1512 aaKnown RBP18.24■□□□□ 0.51
TRPM4-202ENST00000427978 PPP4R2Q9NY27 417 aa18.23■□□□□ 0.51
TRPM4-202ENST00000427978 TMC1Q8TDI8 760 aa18.21■□□□□ 0.51
TRPM4-202ENST00000427978 KDM6BO15054 1643 aa18.21■□□□□ 0.51
TRPM4-202ENST00000427978 CNTLNQ9NXG0 1405 aa18.21■□□□□ 0.51
TRPM4-202ENST00000427978 MSH5O43196 834 aa18.2■□□□□ 0.5
TRPM4-202ENST00000427978 RGL3Q3MIN7 710 aa18.2■□□□□ 0.5
TRPM4-202ENST00000427978 UGGT2Q9NYU1 1516 aa18.19■□□□□ 0.5
TRPM4-202ENST00000427978 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.19■□□□□ 0.5
TRPM4-202ENST00000427978 CARD11Q9BXL7 1154 aa18.19■□□□□ 0.5
TRPM4-202ENST00000427978 THOC2Q8NI27 1593 aaKnown RBP18.18■□□□□ 0.5
TRPM4-202ENST00000427978 LAMC3Q9Y6N6 1575 aa18.16■□□□□ 0.5
TRPM4-202ENST00000427978 CCDC136Q96JN2 1154 aa18.16■□□□□ 0.5
TRPM4-202ENST00000427978 LRRIQ1Q96JM4 1722 aa18.15■□□□□ 0.5
TRPM4-202ENST00000427978 PRG4Q92954 1404 aaPredicted RBP18.15■□□□□ 0.5
TRPM4-202ENST00000427978 DCAF11Q8TEB1 546 aa18.15■□□□□ 0.5
TRPM4-202ENST00000427978 SAMD9Q5K651 1589 aa18.14■□□□□ 0.5
TRPM4-202ENST00000427978 ANKRD30BQ9BXX2 1392 aa18.14■□□□□ 0.49
TRPM4-202ENST00000427978 ZNF608Q9ULD9 1512 aaPredicted RBP18.14■□□□□ 0.49
TRPM4-202ENST00000427978 TSPY4P0CV99 314 aa18.13■□□□□ 0.49
TRPM4-202ENST00000427978 TSPY10P0CW01 314 aa18.13■□□□□ 0.49
TRPM4-202ENST00000427978 DAPK1P53355 1430 aa18.13■□□□□ 0.49
TRPM4-202ENST00000427978 PLEKHD1A6NEE1 506 aa18.13■□□□□ 0.49
TRPM4-202ENST00000427978 NBR1Q14596 966 aa18.13■□□□□ 0.49
TRPM4-202ENST00000427978 DENND4BO75064 1496 aaPredicted RBP18.12■□□□□ 0.49
TRPM4-202ENST00000427978 IQGAP2Q13576 1575 aa18.12■□□□□ 0.49
TRPM4-202ENST00000427978 ABCA5Q8WWZ7 1642 aa18.12■□□□□ 0.49
TRPM4-202ENST00000427978 ABCC5O15440 1437 aa18.12■□□□□ 0.49
TRPM4-202ENST00000427978 HECW1Q76N89 1606 aa18.12■□□□□ 0.49
TRPM4-202ENST00000427978 HNRNPMP52272 730 aaKnown RBP eCLIP18.11■□□□□ 0.49
TRPM4-202ENST00000427978 NUP155O75694 1391 aa18.11■□□□□ 0.49
TRPM4-202ENST00000427978 USP47Q96K76 1375 aa18.1■□□□□ 0.49
TRPM4-202ENST00000427978 ZBED9Q6R2W3 1325 aa18.1■□□□□ 0.49
TRPM4-202ENST00000427978 MIA2Q96PC5 1412 aa18.09■□□□□ 0.49
TRPM4-202ENST00000427978 KDM5BQ9UGL1 1544 aa18.09■□□□□ 0.49
TRPM4-202ENST00000427978 NPM2Q86SE8 214 aaKnown RBP18.09■□□□□ 0.49
TRPM4-202ENST00000427978 ST20-MTHFSA0A0A6YYL1 179 aa18.08■□□□□ 0.49
TRPM4-202ENST00000427978 KIF21AQ7Z4S6 1674 aa18.08■□□□□ 0.49
TRPM4-202ENST00000427978 AKNAQ7Z591 1439 aa18.08■□□□□ 0.48
TRPM4-202ENST00000427978 NCOA1Q15788 1441 aa18.08■□□□□ 0.48
TRPM4-202ENST00000427978 JPH4Q96JJ6 628 aa18.05■□□□□ 0.48
TRPM4-202ENST00000427978 TCOF1Q13428 1488 aaKnown RBP18.04■□□□□ 0.48
TRPM4-202ENST00000427978 RPRD2Q5VT52 1461 aaKnown RBP18.03■□□□□ 0.48
TRPM4-202ENST00000427978 PLB1Q6P1J6 1458 aa18.03■□□□□ 0.48
TRPM4-202ENST00000427978 CC2D1BQ5T0F9 858 aaKnown RBP18.02■□□□□ 0.47
TRPM4-202ENST00000427978 ANKRD30AQ9BXX3 1397 aa18.01■□□□□ 0.47
TRPM4-202ENST00000427978 NUDCQ9Y266 331 aa18.01■□□□□ 0.47
TRPM4-202ENST00000427978 ERCC6Q03468 1493 aa18■□□□□ 0.47
TRPM4-202ENST00000427978 NUP153P49790 1475 aaKnown RBP17.99■□□□□ 0.47
TRPM4-202ENST00000427978 WDR62O43379 1518 aa17.98■□□□□ 0.47
TRPM4-202ENST00000427978 ARHGEF11O15085 1522 aa17.98■□□□□ 0.47
TRPM4-202ENST00000427978 MYT1LQ9UL68 1186 aa17.98■□□□□ 0.47
TRPM4-202ENST00000427978 TARBP1Q13395 1621 aaKnown RBP17.97■□□□□ 0.47
TRPM4-202ENST00000427978 ANKRD50Q9ULJ7 1429 aa17.96■□□□□ 0.47
TRPM4-202ENST00000427978 MRC2Q9UBG0 1479 aa17.96■□□□□ 0.47
TRPM4-202ENST00000427978 FANCIQ9NVI1 1328 aa17.96■□□□□ 0.47
TRPM4-202ENST00000427978 ROCK1Q13464 1354 aa17.96■□□□□ 0.47
TRPM4-202ENST00000427978 ERICH6BQ5W0A0 696 aa17.95■□□□□ 0.46
TRPM4-202ENST00000427978 CAMSAP2Q08AD1 1489 aa17.94■□□□□ 0.46
TRPM4-202ENST00000427978 ANP32AP39687 249 aaKnown RBP17.94■□□□□ 0.46
TRPM4-202ENST00000427978 TEX14Q8IWB6 1497 aa17.94■□□□□ 0.46
TRPM4-202ENST00000427978 TROQ12816 1431 aaPredicted RBP17.94■□□□□ 0.46
TRPM4-202ENST00000427978 ROCK2O75116 1388 aaKnown RBP17.94■□□□□ 0.46
TRPM4-202ENST00000427978 KIAA0586Q9BVV6 1533 aa17.93■□□□□ 0.46
TRPM4-202ENST00000427978 KIAA1107Q9UPP5 1409 aa17.93■□□□□ 0.46
TRPM4-202ENST00000427978 GCC2Q8IWJ2 1684 aa17.93■□□□□ 0.46
TRPM4-202ENST00000427978 ADAMTS12P58397 1594 aa17.92■□□□□ 0.46
TRPM4-202ENST00000427978 NBPF1Q3BBV0 1214 aa17.92■□□□□ 0.46
TRPM4-202ENST00000427978 PNISRQ8TF01 805 aaKnown RBP17.92■□□□□ 0.46
TRPM4-202ENST00000427978 DISP1Q96F81 1524 aa17.91■□□□□ 0.46
TRPM4-202ENST00000427978 PBRM1Q86U86 1689 aa17.91■□□□□ 0.46
TRPM4-202ENST00000427978 PAK3O75914 559 aaPredicted RBP17.91■□□□□ 0.46
TRPM4-202ENST00000427978 PLIN1O60240 522 aa17.9■□□□□ 0.46
TRPM4-202ENST00000427978 NOP58Q9Y2X3 529 aaKnown RBP17.9■□□□□ 0.46
TRPM4-202ENST00000427978 EXOC6Q8TAG9 804 aa17.89■□□□□ 0.46
TRPM4-202ENST00000427978 PZPP20742 1482 aa17.89■□□□□ 0.46
TRPM4-202ENST00000427978 CARMIL2Q6F5E8 1435 aa17.89■□□□□ 0.45
TRPM4-202ENST00000427978 SPATA31E1Q6ZUB1 1445 aa17.88■□□□□ 0.45
TRPM4-202ENST00000427978 GPATCH8Q9UKJ3 1502 aaKnown RBP17.88■□□□□ 0.45
TRPM4-202ENST00000427978 GRIN2AQ12879 1464 aa17.88■□□□□ 0.45
TRPM4-202ENST00000427978 DHX29Q7Z478 1369 aaKnown RBP17.87■□□□□ 0.45
TRPM4-202ENST00000427978 CDCA7LQ96GN5 454 aa17.87■□□□□ 0.45
TRPM4-202ENST00000427978 KIF15Q9NS87 1388 aa17.87■□□□□ 0.45
TRPM4-202ENST00000427978 IFT140Q96RY7 1462 aa17.86■□□□□ 0.45
TRPM4-202ENST00000427978 ZBTB47Q9UFB7 747 aaPredicted RBP17.85■□□□□ 0.45
TRPM4-202ENST00000427978 KIAA0556O60303 1618 aa17.85■□□□□ 0.45
TRPM4-202ENST00000427978 RCAN3Q9UKA8 241 aa17.85■□□□□ 0.45
TRPM4-202ENST00000427978 SKAP1Q86WV1 359 aa17.84■□□□□ 0.45
TRPM4-202ENST00000427978 C9orf84Q5VXU9 1444 aa17.84■□□□□ 0.45
TRPM4-202ENST00000427978 DNMT1P26358 1616 aaKnown RBP17.84■□□□□ 0.45
TRPM4-202ENST00000427978 RAPGEF6Q8TEU7 1601 aa17.84■□□□□ 0.45
TRPM4-202ENST00000427978 RTL5Q5HYW3 569 aaPredicted RBP17.84■□□□□ 0.45
TRPM4-202ENST00000427978 MYBBP1AQ9BQG0 1328 aaKnown RBP17.83■□□□□ 0.45
TRPM4-202ENST00000427978 DEKP35659 375 aaKnown RBP17.82■□□□□ 0.44
TRPM4-202ENST00000427978 SMG6Q86US8 1419 aaKnown RBP17.81■□□□□ 0.44
TRPM4-202ENST00000427978 KIF14Q15058 1648 aa17.81■□□□□ 0.44
TRPM4-202ENST00000427978 PANK3Q9H999 370 aa17.81■□□□□ 0.44
TRPM4-202ENST00000427978 LAS1LQ9Y4W2 734 aaKnown RBP17.8■□□□□ 0.44
TRPM4-202ENST00000427978 RALBP1Q15311 655 aa17.79■□□□□ 0.44
TRPM4-202ENST00000427978 KTN1Q86UP2 1357 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms