RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 ABCC10Q5T3U5 1492 aa31.75■■■□□ 2.67
CNEP1R1-202ENST00000427478 DIEXFQ68CQ4 756 aaKnown RBP31.75■■■□□ 2.67
CNEP1R1-202ENST00000427478 KDM6BO15054 1643 aa31.73■■■□□ 2.67
CNEP1R1-202ENST00000427478 ABCC2Q92887 1545 aa31.71■■■□□ 2.67
CNEP1R1-202ENST00000427478 SIN3AQ96ST3 1273 aa31.7■■■□□ 2.66
CNEP1R1-202ENST00000427478 ROCK1Q13464 1354 aa31.67■■■□□ 2.66
CNEP1R1-202ENST00000427478 ZNF777Q9ULD5 760 aaPredicted RBP31.67■■■□□ 2.66
CNEP1R1-202ENST00000427478 CROCC2H7BZ55 1655 aa31.66■■■□□ 2.66
CNEP1R1-202ENST00000427478 NEUROD1Q13562 356 aa31.65■■■□□ 2.66
CNEP1R1-202ENST00000427478 ADGBQ8N7X0 1667 aa31.64■■■□□ 2.66
CNEP1R1-202ENST00000427478 PREX2Q70Z35 1606 aa31.56■■■□□ 2.64
CNEP1R1-202ENST00000427478 ZCCHC11Q5TAX3 1644 aaKnown RBP31.56■■■□□ 2.64
CNEP1R1-202ENST00000427478 CDC42BPBQ9Y5S2 1711 aa31.55■■■□□ 2.64
CNEP1R1-202ENST00000427478 TRIM52Q96A61 297 aa31.55■■■□□ 2.64
CNEP1R1-202ENST00000427478 UHRF1BP1LA0JNW5 1464 aa31.52■■■□□ 2.64
CNEP1R1-202ENST00000427478 TTC37Q6PGP7 1564 aa31.52■■■□□ 2.64
CNEP1R1-202ENST00000427478 DENND4BO75064 1496 aaPredicted RBP31.5■■■□□ 2.63
CNEP1R1-202ENST00000427478 ADGRL2O95490 1459 aa31.5■■■□□ 2.63
CNEP1R1-202ENST00000427478 TIMELESSQ9UNS1 1208 aa31.49■■■□□ 2.63
CNEP1R1-202ENST00000427478 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.48■■■□□ 2.63
CNEP1R1-202ENST00000427478 NCOA1Q15788 1441 aa31.48■■■□□ 2.63
CNEP1R1-202ENST00000427478 SAMD9LQ8IVG5 1584 aa31.46■■■□□ 2.63
CNEP1R1-202ENST00000427478 KDM5BQ9UGL1 1544 aa31.45■■■□□ 2.63
CNEP1R1-202ENST00000427478 MYO5CQ9NQX4 1742 aa31.44■■■□□ 2.62
CNEP1R1-202ENST00000427478 SHANK2Q9UPX8 1470 aa31.44■■■□□ 2.62
CNEP1R1-202ENST00000427478 ARHGEF5Q12774 1597 aa31.42■■■□□ 2.62
CNEP1R1-202ENST00000427478 TONSLQ96HA7 1378 aa31.41■■■□□ 2.62
CNEP1R1-202ENST00000427478 MPHOSPH9Q99550 1183 aa31.41■■■□□ 2.62
CNEP1R1-202ENST00000427478 ANKRD30AQ9BXX3 1397 aa31.41■■■□□ 2.62
CNEP1R1-202ENST00000427478 C9orf84Q5VXU9 1444 aa31.39■■■□□ 2.62
CNEP1R1-202ENST00000427478 ARHGAP5Q13017 1502 aa31.39■■■□□ 2.62
CNEP1R1-202ENST00000427478 ACIN1Q9UKV3 1341 aaKnown RBP31.39■■■□□ 2.62
CNEP1R1-202ENST00000427478 MBD5Q9P267 1494 aa31.36■■■□□ 2.61
CNEP1R1-202ENST00000427478 HNRNPMP52272 730 aaKnown RBP eCLIP31.36■■■□□ 2.61
CNEP1R1-202ENST00000427478 KCNH8Q96L42 1107 aa31.36■■■□□ 2.61
CNEP1R1-202ENST00000427478 PPP1R15AO75807 674 aaPredicted RBP31.34■■■□□ 2.61
CNEP1R1-202ENST00000427478 CCDC141Q6ZP82 1450 aa31.32■■■□□ 2.6
CNEP1R1-202ENST00000427478 SYCP2Q9BX26 1530 aa31.32■■■□□ 2.6
CNEP1R1-202ENST00000427478 TSPY4P0CV99 314 aa31.31■■■□□ 2.6
CNEP1R1-202ENST00000427478 TSPY10P0CW01 314 aa31.31■■■□□ 2.6
CNEP1R1-202ENST00000427478 OSCARQ8IYS5 282 aa31.3■■■□□ 2.6
CNEP1R1-202ENST00000427478 ANKRD50Q9ULJ7 1429 aa31.29■■■□□ 2.6
CNEP1R1-202ENST00000427478 FOXD1Q16676 465 aa31.28■■■□□ 2.6
CNEP1R1-202ENST00000427478 PZPP20742 1482 aa31.27■■■□□ 2.6
CNEP1R1-202ENST00000427478 SLC4A1APQ9BWU0 796 aaKnown RBP31.25■■■□□ 2.59
CNEP1R1-202ENST00000427478 KIF15Q9NS87 1388 aa31.21■■■□□ 2.59
CNEP1R1-202ENST00000427478 PLCH2O75038 1416 aa31.21■■■□□ 2.59
CNEP1R1-202ENST00000427478 PLEKHH2Q8IVE3 1493 aa31.2■■■□□ 2.59
CNEP1R1-202ENST00000427478 RSPH4AQ5TD94 716 aa31.2■■■□□ 2.59
CNEP1R1-202ENST00000427478 ANKRD30BQ9BXX2 1392 aa31.19■■■□□ 2.58
CNEP1R1-202ENST00000427478 MAST1Q9Y2H9 1570 aa31.19■■■□□ 2.58
CNEP1R1-202ENST00000427478 MIER1Q8N108 512 aa31.18■■■□□ 2.58
CNEP1R1-202ENST00000427478 WDR7Q9Y4E6 1490 aa31.18■■■□□ 2.58
CNEP1R1-202ENST00000427478 KIAA1107Q9UPP5 1409 aa31.16■■■□□ 2.58
CNEP1R1-202ENST00000427478 ARHGEF12Q9NZN5 1544 aa31.14■■■□□ 2.58
CNEP1R1-202ENST00000427478 RPRD2Q5VT52 1461 aaKnown RBP31.12■■■□□ 2.57
CNEP1R1-202ENST00000427478 ABCC1P33527 1531 aa31.12■■■□□ 2.57
CNEP1R1-202ENST00000427478 EFCAB2Q5VUJ9 269 aa31.1■■■□□ 2.57
CNEP1R1-202ENST00000427478 KDM5DQ9BY66 1539 aa31.1■■■□□ 2.57
CNEP1R1-202ENST00000427478 PLXNC1O60486 1568 aa31.09■■■□□ 2.57
CNEP1R1-202ENST00000427478 ARAP3Q8WWN8 1544 aa31.08■■■□□ 2.57
CNEP1R1-202ENST00000427478 NUP155O75694 1391 aa31.07■■■□□ 2.56
CNEP1R1-202ENST00000427478 ABCA9Q8IUA7 1624 aa31.06■■■□□ 2.56
CNEP1R1-202ENST00000427478 ASXL2Q76L83 1435 aa31.05■■■□□ 2.56
CNEP1R1-202ENST00000427478 PKD2Q13563 968 aa31.04■■■□□ 2.56
CNEP1R1-202ENST00000427478 TEX14Q8IWB6 1497 aa31.02■■■□□ 2.56
CNEP1R1-202ENST00000427478 L3MBTL2Q969R5 705 aa31.02■■■□□ 2.56
CNEP1R1-202ENST00000427478 HIRIP3Q9BW71 556 aaPredicted RBP31■■■□□ 2.55
CNEP1R1-202ENST00000427478 TRAPPC8Q9Y2L5 1435 aa30.98■■■□□ 2.55
CNEP1R1-202ENST00000427478 UNC13BO14795 1591 aa30.97■■■□□ 2.55
CNEP1R1-202ENST00000427478 DUOX2Q9NRD8 1548 aa30.95■■■□□ 2.54
CNEP1R1-202ENST00000427478 FANCAO15360 1455 aa30.94■■■□□ 2.54
CNEP1R1-202ENST00000427478 FAM135AQ9P2D6 1515 aa30.94■■■□□ 2.54
CNEP1R1-202ENST00000427478 NPM1P06748 294 aaKnown RBP eCLIP30.93■■■□□ 2.54
CNEP1R1-202ENST00000427478 ERBINQ96RT1 1412 aa30.87■■■□□ 2.53
CNEP1R1-202ENST00000427478 ZFYVE16Q7Z3T8 1539 aa30.87■■■□□ 2.53
CNEP1R1-202ENST00000427478 IQGAP3Q86VI3 1631 aa30.84■■■□□ 2.53
CNEP1R1-202ENST00000427478 DDX10Q13206 875 aaKnown RBP30.84■■■□□ 2.53
CNEP1R1-202ENST00000427478 SPAG9O60271 1321 aaKnown RBP30.84■■■□□ 2.53
CNEP1R1-202ENST00000427478 AFAP1Q8N556 730 aa30.83■■■□□ 2.53
CNEP1R1-202ENST00000427478 ADGRL1O94910 1474 aa30.82■■■□□ 2.52
CNEP1R1-202ENST00000427478 NBPF8Q3BBV2 869 aa30.82■■■□□ 2.52
CNEP1R1-202ENST00000427478 YTHDC1Q96MU7 727 aaKnown RBP30.82■■■□□ 2.52
CNEP1R1-202ENST00000427478 RTEL1-TNFRSF6BF6WH68 1400 aa30.81■■■□□ 2.52
CNEP1R1-202ENST00000427478 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.81■■■□□ 2.52
CNEP1R1-202ENST00000427478 MAGI2Q86UL8 1455 aa30.8■■■□□ 2.52
CNEP1R1-202ENST00000427478 INO80Q9ULG1 1556 aaPredicted RBP30.79■■■□□ 2.52
CNEP1R1-202ENST00000427478 CENPBP07199 599 aaPredicted RBP30.78■■■□□ 2.52
CNEP1R1-202ENST00000427478 ATP7AQ04656 1500 aa30.77■■■□□ 2.52
CNEP1R1-202ENST00000427478 SCAPERQ9BY12 1400 aa30.77■■■□□ 2.52
CNEP1R1-202ENST00000427478 HSPA5P11021 654 aaKnown RBP30.76■■■□□ 2.52
CNEP1R1-202ENST00000427478 EIF4G2P78344 907 aaKnown RBP eCLIP30.73■■■□□ 2.51
CNEP1R1-202ENST00000427478 CFAP74Q9C0B2 1584 aa30.71■■■□□ 2.51
CNEP1R1-202ENST00000427478 CD109Q6YHK3 1445 aa30.7■■■□□ 2.5
CNEP1R1-202ENST00000427478 RIMBP3CA6NJZ7 1639 aa30.65■■■□□ 2.5
CNEP1R1-202ENST00000427478 RIMBP3BA6NNM3 1639 aa30.65■■■□□ 2.5
CNEP1R1-202ENST00000427478 RIMBP3Q9UFD9 1639 aa30.65■■■□□ 2.5
CNEP1R1-202ENST00000427478 CCDC144AA2RUR9 1427 aa30.65■■■□□ 2.5
CNEP1R1-202ENST00000427478 DEPDC5O75140 1603 aa30.65■■■□□ 2.5
CNEP1R1-202ENST00000427478 ZNF326Q5BKZ1 582 aaKnown RBP30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms