RNA–Protein interactions for RNA: ENST00000427025.6

NHSL1-204, Transcript of NHS like 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NHSL1, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHSL1-204ENST00000427025 CLIP1P30622 1438 aa16.23■□□□□ 0.19
NHSL1-204ENST00000427025 FRAT1Q92837 279 aaPredicted RBP16.23■□□□□ 0.19
NHSL1-204ENST00000427025 CEP162Q5TB80 1403 aa16.22■□□□□ 0.19
NHSL1-204ENST00000427025 MEX3CQ5U5Q3 659 aaKnown RBP16.22■□□□□ 0.19
NHSL1-204ENST00000427025 CHMP3Q9Y3E7 222 aa16.22■□□□□ 0.19
NHSL1-204ENST00000427025 CREBRFQ8IUR6 639 aa16.21■□□□□ 0.19
NHSL1-204ENST00000427025 TAF7LQ5H9L4 462 aa16.19■□□□□ 0.18
NHSL1-204ENST00000427025 KNSTRNQ9Y448 316 aa16.19■□□□□ 0.18
NHSL1-204ENST00000427025 NUDCQ9Y266 331 aa16.18■□□□□ 0.18
NHSL1-204ENST00000427025 CEP89Q96ST8 783 aa16.17■□□□□ 0.18
NHSL1-204ENST00000427025 FRAT2O75474 233 aaPredicted RBP16.17■□□□□ 0.18
NHSL1-204ENST00000427025 MTUS2Q5JR59 1369 aa16.16■□□□□ 0.18
NHSL1-204ENST00000427025 GORABQ5T7V8 394 aa16.16■□□□□ 0.18
NHSL1-204ENST00000427025 GTF2E1P29083 439 aaPredicted RBP16.15■□□□□ 0.18
NHSL1-204ENST00000427025 RTF1Q92541 710 aaKnown RBP16.15■□□□□ 0.18
NHSL1-204ENST00000427025 MARCH6O60337 910 aa16.15■□□□□ 0.18
NHSL1-204ENST00000427025 CC2D1BQ5T0F9 858 aaKnown RBP16.15■□□□□ 0.18
NHSL1-204ENST00000427025 RASSF8Q8NHQ8 419 aa16.15■□□□□ 0.18
NHSL1-204ENST00000427025 SLKQ9H2G2 1235 aaPredicted RBP16.15■□□□□ 0.18
NHSL1-204ENST00000427025 HSCBQ8IWL3 235 aa16.14■□□□□ 0.17
NHSL1-204ENST00000427025 CTDP1Q9Y5B0 961 aaPredicted RBP16.14■□□□□ 0.17
NHSL1-204ENST00000427025 RAD21O60216 631 aa16.14■□□□□ 0.17
NHSL1-204ENST00000427025 SAFB2Q14151 953 aaKnown RBP eCLIP16.14■□□□□ 0.17
NHSL1-204ENST00000427025 TCEAL9Q9UHQ7 104 aa16.14■□□□□ 0.17
NHSL1-204ENST00000427025 APBB1O00213 710 aa16.11■□□□□ 0.17
NHSL1-204ENST00000427025 HSP90B1P14625 803 aaKnown RBP16.1■□□□□ 0.17
NHSL1-204ENST00000427025 HDGFP51858 240 aaKnown RBP16.1■□□□□ 0.17
NHSL1-204ENST00000427025 IPO9Q96P70 1041 aaKnown RBP16.1■□□□□ 0.17
NHSL1-204ENST00000427025 VSIG10Q8N0Z9 540 aa16.09■□□□□ 0.17
NHSL1-204ENST00000427025 TIMELESSQ9UNS1 1208 aa16.09■□□□□ 0.17
NHSL1-204ENST00000427025 SRPK2P78362 688 aaKnown RBP16.09■□□□□ 0.17
NHSL1-204ENST00000427025 ZCCHC6Q5VYS8 1495 aaKnown RBP16.08■□□□□ 0.17
NHSL1-204ENST00000427025 MCCP23508 829 aa16.08■□□□□ 0.16
NHSL1-204ENST00000427025 CARD11Q9BXL7 1154 aa16.08■□□□□ 0.16
NHSL1-204ENST00000427025 TRIM34Q9BYJ4 488 aa16.07■□□□□ 0.16
NHSL1-204ENST00000427025 PLEKHD1A6NEE1 506 aa16.07■□□□□ 0.16
NHSL1-204ENST00000427025 HSP90AA2PQ14568 343 aaPredicted RBP16.07■□□□□ 0.16
NHSL1-204ENST00000427025 FBXW7Q969H0 707 aa16.07■□□□□ 0.16
NHSL1-204ENST00000427025 CDCA8Q53HL2 280 aa16.06■□□□□ 0.16
NHSL1-204ENST00000427025 KIAA1211Q6ZU35 1233 aa16.04■□□□□ 0.16
NHSL1-204ENST00000427025 STK26Q9P289 416 aa16.04■□□□□ 0.16
NHSL1-204ENST00000427025 GOLGA3Q08378 1498 aa16.03■□□□□ 0.16
NHSL1-204ENST00000427025 TOMM22Q9NS69 142 aa16.03■□□□□ 0.16
NHSL1-204ENST00000427025 SAMD1Q6SPF0 538 aaPredicted RBP16.02■□□□□ 0.16
NHSL1-204ENST00000427025 CCER2I3L3R5 266 aa16.02■□□□□ 0.15
NHSL1-204ENST00000427025 GOLGA6L3A6NEY3 463 aa16.01■□□□□ 0.15
NHSL1-204ENST00000427025 CHMP4BQ9H444 224 aaKnown RBP16■□□□□ 0.15
NHSL1-204ENST00000427025 PES1O00541 588 aaKnown RBP15.99■□□□□ 0.15
NHSL1-204ENST00000427025 EVA1CP58658 441 aa15.99■□□□□ 0.15
NHSL1-204ENST00000427025 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.98■□□□□ 0.15
NHSL1-204ENST00000427025 ERCC6Q03468 1493 aa15.98■□□□□ 0.15
NHSL1-204ENST00000427025 TNNT3P45378 269 aaPredicted RBP15.97■□□□□ 0.15
NHSL1-204ENST00000427025 SLC4A3P48751 1232 aa15.97■□□□□ 0.15
NHSL1-204ENST00000427025 PPP1R1BQ9UD71 204 aaPredicted RBP15.96■□□□□ 0.15
NHSL1-204ENST00000427025 RSPH6AQ9H0K4 717 aa15.96■□□□□ 0.15
NHSL1-204ENST00000427025 PATL2C9JE40 543 aaKnown RBP15.95■□□□□ 0.14
NHSL1-204ENST00000427025 TCERG1O14776 1098 aaKnown RBP15.95■□□□□ 0.14
NHSL1-204ENST00000427025 RCAN3Q9UKA8 241 aa15.94■□□□□ 0.14
NHSL1-204ENST00000427025 GBP4Q96PP9 640 aa15.94■□□□□ 0.14
NHSL1-204ENST00000427025 FOXD4L1Q9NU39 408 aa15.94■□□□□ 0.14
NHSL1-204ENST00000427025 TPM4P67936 248 aa15.93■□□□□ 0.14
NHSL1-204ENST00000427025 HSPA5P11021 654 aaKnown RBP15.91■□□□□ 0.14
NHSL1-204ENST00000427025 GOLGA6L1Q8N7Z2 621 aa15.91■□□□□ 0.14
NHSL1-204ENST00000427025 PAF1Q8N7H5 531 aa15.91■□□□□ 0.14
NHSL1-204ENST00000427025 GSE1Q14687 1217 aa15.9■□□□□ 0.14
NHSL1-204ENST00000427025 MFAP1P55081 439 aaKnown RBP15.89■□□□□ 0.13
NHSL1-204ENST00000427025 GPATCH3Q96I76 525 aa15.88■□□□□ 0.13
NHSL1-204ENST00000427025 MS4A1P11836 297 aa15.88■□□□□ 0.13
NHSL1-204ENST00000427025 CCAR1Q8IX12 1150 aaKnown RBP15.88■□□□□ 0.13
NHSL1-204ENST00000427025 LTV1Q96GA3 475 aaPredicted RBP15.88■□□□□ 0.13
NHSL1-204ENST00000427025 CCDC34Q96HJ3 373 aa15.88■□□□□ 0.13
NHSL1-204ENST00000427025 NOL10Q9BSC4 688 aaKnown RBP15.88■□□□□ 0.13
NHSL1-204ENST00000427025 SYTL4Q96C24 671 aaPredicted RBP15.88■□□□□ 0.13
NHSL1-204ENST00000427025 TPD52L1Q16890 204 aaPredicted RBP15.87■□□□□ 0.13
NHSL1-204ENST00000427025 TNIKQ9UKE5 1360 aa15.87■□□□□ 0.13
NHSL1-204ENST00000427025 GGT6Q6P531 493 aa15.86■□□□□ 0.13
NHSL1-204ENST00000427025 CFDP1Q9UEE9 299 aaPredicted RBP15.86■□□□□ 0.13
NHSL1-204ENST00000427025 TRIM6-TRIM34B2RNG4 842 aa15.85■□□□□ 0.13
NHSL1-204ENST00000427025 KANK1Q14678 1352 aa15.85■□□□□ 0.13
NHSL1-204ENST00000427025 BAZ1BQ9UIG0 1483 aaKnown RBP15.84■□□□□ 0.13
NHSL1-204ENST00000427025 PPM1FP49593 454 aaPredicted RBP15.84■□□□□ 0.13
NHSL1-204ENST00000427025 CCDC43Q96MW1 224 aaKnown RBP15.84■□□□□ 0.13
NHSL1-204ENST00000427025 RSF1Q96T23 1441 aaPredicted RBP15.83■□□□□ 0.13
NHSL1-204ENST00000427025 CCNB3Q8WWL7 1395 aa15.83■□□□□ 0.13
NHSL1-204ENST00000427025 HTATSF1O43719 755 aaKnown RBP15.83■□□□□ 0.12
NHSL1-204ENST00000427025 AMOTL1Q8IY63 956 aa15.83■□□□□ 0.12
NHSL1-204ENST00000427025 FOXD1Q16676 465 aa15.82■□□□□ 0.12
NHSL1-204ENST00000427025 HDGFL2Q7Z4V5 671 aaPredicted RBP15.82■□□□□ 0.12
NHSL1-204ENST00000427025 MORC1Q86VD1 984 aa15.82■□□□□ 0.12
NHSL1-204ENST00000427025 NUTM2FA1L443 756 aa15.82■□□□□ 0.12
NHSL1-204ENST00000427025 DHX16O60231 1041 aaKnown RBP15.82■□□□□ 0.12
NHSL1-204ENST00000427025 WDR70Q9NW82 654 aa15.82■□□□□ 0.12
NHSL1-204ENST00000427025 FOXD4L5Q5VV16 416 aaPredicted RBP15.81■□□□□ 0.12
NHSL1-204ENST00000427025 FOXD4L4Q8WXT5 416 aaPredicted RBP15.81■□□□□ 0.12
NHSL1-204ENST00000427025 TPM3P06753 285 aa15.81■□□□□ 0.12
NHSL1-204ENST00000427025 DCAF11Q8TEB1 546 aa15.81■□□□□ 0.12
NHSL1-204ENST00000427025 PTMSP20962 102 aa15.81■□□□□ 0.12
NHSL1-204ENST00000427025 USP35Q9P2H5 1018 aa15.8■□□□□ 0.12
NHSL1-204ENST00000427025 CALD1Q05682 793 aaKnown RBP15.79■□□□□ 0.12
NHSL1-204ENST00000427025 VPS37DQ86XT2 251 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms