RNA–Protein interactions for RNA: ENST00000425388.1

LINC00501-201, long intergenic non-protein coding RNA 501, humanhuman

TSL 2 BASIC

Gene LINC00501, Length 2,046 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00501-201ENST00000425388 RRBP1Q9P2E9 1410 aaKnown RBP10.9□□□□□ -0.66
LINC00501-201ENST00000425388 SOGA1O94964 1423 aa10.9□□□□□ -0.67
LINC00501-201ENST00000425388 WDR97A6NE52 1622 aa10.89□□□□□ -0.67
LINC00501-201ENST00000425388 AAMPQ13685 434 aa10.89□□□□□ -0.67
LINC00501-201ENST00000425388 DDRGK1Q96HY6 314 aa10.89□□□□□ -0.67
LINC00501-201ENST00000425388 MAPKBP1O60336 1514 aa10.89□□□□□ -0.67
LINC00501-201ENST00000425388 HSP90AA1P07900 732 aaKnown RBP10.89□□□□□ -0.67
LINC00501-201ENST00000425388 TRHP20396 242 aaPredicted RBP10.89□□□□□ -0.67
LINC00501-201ENST00000425388 PDS5BQ9NTI5 1447 aa10.88□□□□□ -0.67
LINC00501-201ENST00000425388 LAS1LQ9Y4W2 734 aaKnown RBP10.88□□□□□ -0.67
LINC00501-201ENST00000425388 ATXN8OSP0DMR3 200 aa10.87□□□□□ -0.67
LINC00501-201ENST00000425388 RBM10P98175 930 aaKnown RBP10.86□□□□□ -0.67
LINC00501-201ENST00000425388 FRAT1Q92837 279 aaPredicted RBP10.86□□□□□ -0.67
LINC00501-201ENST00000425388 ZBED9Q6R2W3 1325 aa10.86□□□□□ -0.67
LINC00501-201ENST00000425388 CENPJQ9HC77 1338 aaPredicted RBP10.86□□□□□ -0.67
LINC00501-201ENST00000425388 DNMBPQ6XZF7 1577 aa10.85□□□□□ -0.67
LINC00501-201ENST00000425388 TCERG1O14776 1098 aaKnown RBP10.85□□□□□ -0.67
LINC00501-201ENST00000425388 C1orf115Q9H7X2 142 aa10.84□□□□□ -0.67
LINC00501-201ENST00000425388 POLR3GLQ9BT43 218 aa10.83□□□□□ -0.68
LINC00501-201ENST00000425388 NESP48681 1621 aa10.83□□□□□ -0.68
LINC00501-201ENST00000425388 KIF27Q86VH2 1401 aa10.83□□□□□ -0.68
LINC00501-201ENST00000425388 MS4A1P11836 297 aa10.82□□□□□ -0.68
LINC00501-201ENST00000425388 NFKBIBQ15653 356 aa10.82□□□□□ -0.68
LINC00501-201ENST00000425388 RUSC2Q8N2Y8 1516 aa10.82□□□□□ -0.68
LINC00501-201ENST00000425388 CALD1Q05682 793 aaKnown RBP10.82□□□□□ -0.68
LINC00501-201ENST00000425388 DNAJC5BQ9UF47 199 aa10.81□□□□□ -0.68
LINC00501-201ENST00000425388 RNF123Q5XPI4 1314 aa10.81□□□□□ -0.68
LINC00501-201ENST00000425388 IFNLR1Q8IU57 520 aaPredicted RBP10.8□□□□□ -0.68
LINC00501-201ENST00000425388 TOPBP1Q92547 1522 aa10.8□□□□□ -0.68
LINC00501-201ENST00000425388 KCTD17Q8N5Z5 321 aa10.8□□□□□ -0.68
LINC00501-201ENST00000425388 FGD5Q6ZNL6 1462 aa10.79□□□□□ -0.68
LINC00501-201ENST00000425388 SMG6Q86US8 1419 aaKnown RBP10.79□□□□□ -0.68
LINC00501-201ENST00000425388 ERICH3Q5RHP9 1530 aa10.79□□□□□ -0.68
LINC00501-201ENST00000425388 A0A0U1RQG5 324 aaPredicted RBP10.79□□□□□ -0.68
LINC00501-201ENST00000425388 VASPP50552 380 aaPredicted RBP10.79□□□□□ -0.68
LINC00501-201ENST00000425388 L1TD1Q5T7N2 865 aaKnown RBP10.79□□□□□ -0.68
LINC00501-201ENST00000425388 PNNQ9H307 717 aaKnown RBP10.79□□□□□ -0.68
LINC00501-201ENST00000425388 RAD21O60216 631 aa10.78□□□□□ -0.68
LINC00501-201ENST00000425388 NAP1L5Q96NT1 182 aaPredicted RBP10.78□□□□□ -0.68
LINC00501-201ENST00000425388 CLCN1P35523 988 aa10.77□□□□□ -0.68
LINC00501-201ENST00000425388 PRXQ9BXM0 1461 aa10.77□□□□□ -0.69
LINC00501-201ENST00000425388 RGS22Q8NE09 1264 aa10.77□□□□□ -0.69
LINC00501-201ENST00000425388 BACH2Q9BYV9 841 aa10.77□□□□□ -0.69
LINC00501-201ENST00000425388 BCCIPQ9P287 314 aaKnown RBP eCLIP10.77□□□□□ -0.69
LINC00501-201ENST00000425388 CCNB3Q8WWL7 1395 aa10.77□□□□□ -0.69
LINC00501-201ENST00000425388 PDCL3Q9H2J4 239 aa10.76□□□□□ -0.69
LINC00501-201ENST00000425388 RAB3GAP2Q9H2M9 1393 aa10.76□□□□□ -0.69
LINC00501-201ENST00000425388 ABCA10Q8WWZ4 1543 aa10.75□□□□□ -0.69
LINC00501-201ENST00000425388 PDE4AP27815 886 aa10.75□□□□□ -0.69
LINC00501-201ENST00000425388 RRAGDQ9NQL2 400 aaPredicted RBP10.75□□□□□ -0.69
LINC00501-201ENST00000425388 URB2Q14146 1524 aaKnown RBP10.75□□□□□ -0.69
LINC00501-201ENST00000425388 DCAF11Q8TEB1 546 aa10.75□□□□□ -0.69
LINC00501-201ENST00000425388 POLA1P09884 1462 aaPredicted RBP10.74□□□□□ -0.69
LINC00501-201ENST00000425388 NEUROD2Q15784 382 aa10.73□□□□□ -0.69
LINC00501-201ENST00000425388 KIF21AQ7Z4S6 1674 aa10.73□□□□□ -0.69
LINC00501-201ENST00000425388 TPM2P07951 284 aa10.72□□□□□ -0.69
LINC00501-201ENST00000425388 PRDM4Q9UKN5 801 aa10.72□□□□□ -0.69
LINC00501-201ENST00000425388 SETD5Q9C0A6 1442 aa10.72□□□□□ -0.69
LINC00501-201ENST00000425388 MRC2Q9UBG0 1479 aa10.72□□□□□ -0.69
LINC00501-201ENST00000425388 FHAD1B1AJZ9 1412 aa10.72□□□□□ -0.69
LINC00501-201ENST00000425388 NUDCQ9Y266 331 aa10.7□□□□□ -0.7
LINC00501-201ENST00000425388 IGF1RP08069 1367 aa10.7□□□□□ -0.7
LINC00501-201ENST00000425388 NCOA2Q15596 1464 aa10.69□□□□□ -0.7
LINC00501-201ENST00000425388 RAPGEF2Q9Y4G8 1499 aa10.69□□□□□ -0.7
LINC00501-201ENST00000425388 NCLP19338 710 aaKnown RBP10.68□□□□□ -0.7
LINC00501-201ENST00000425388 MTMR7Q9Y216 660 aa10.68□□□□□ -0.7
LINC00501-201ENST00000425388 WDR62O43379 1518 aa10.67□□□□□ -0.7
LINC00501-201ENST00000425388 CNTLNQ9NXG0 1405 aa10.67□□□□□ -0.7
LINC00501-201ENST00000425388 SIN3AQ96ST3 1273 aa10.67□□□□□ -0.7
LINC00501-201ENST00000425388 MAP7D2Q96T17 732 aa10.67□□□□□ -0.7
LINC00501-201ENST00000425388 AKNAQ7Z591 1439 aa10.66□□□□□ -0.7
LINC00501-201ENST00000425388 RBM25P49756 843 aaKnown RBP10.66□□□□□ -0.7
LINC00501-201ENST00000425388 CUL7Q14999 1698 aa10.65□□□□□ -0.7
LINC00501-201ENST00000425388 ECM2O94769 699 aaPredicted RBP10.65□□□□□ -0.7
LINC00501-201ENST00000425388 ZNF326Q5BKZ1 582 aaKnown RBP10.65□□□□□ -0.7
LINC00501-201ENST00000425388 RAD54L2Q9Y4B4 1467 aa10.65□□□□□ -0.7
LINC00501-201ENST00000425388 BCL11BQ9C0K0 894 aaPredicted RBP10.65□□□□□ -0.71
LINC00501-201ENST00000425388 TARBP1Q13395 1621 aaKnown RBP10.64□□□□□ -0.71
LINC00501-201ENST00000425388 ABCA5Q8WWZ7 1642 aa10.64□□□□□ -0.71
LINC00501-201ENST00000425388 ZNF428Q96B54 188 aa10.64□□□□□ -0.71
LINC00501-201ENST00000425388 CARMIL1Q5VZK9 1371 aa10.64□□□□□ -0.71
LINC00501-201ENST00000425388 TONSLQ96HA7 1378 aa10.63□□□□□ -0.71
LINC00501-201ENST00000425388 ARID3CA6NKF2 412 aa10.62□□□□□ -0.71
LINC00501-201ENST00000425388 FRAT2O75474 233 aaPredicted RBP10.62□□□□□ -0.71
LINC00501-201ENST00000425388 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.62□□□□□ -0.71
LINC00501-201ENST00000425388 IFT140Q96RY7 1462 aa10.62□□□□□ -0.71
LINC00501-201ENST00000425388 HIRIP3Q9BW71 556 aaPredicted RBP10.62□□□□□ -0.71
LINC00501-201ENST00000425388 MRS2Q9HD23 443 aa10.62□□□□□ -0.71
LINC00501-201ENST00000425388 APBB1O00213 710 aa10.61□□□□□ -0.71
LINC00501-201ENST00000425388 SMAP1Q8IYB5 467 aaPredicted RBP10.61□□□□□ -0.71
LINC00501-201ENST00000425388 PRKRIP1Q9H875 184 aaPredicted RBP10.61□□□□□ -0.71
LINC00501-201ENST00000425388 GAPVD1Q14C86 1478 aa10.61□□□□□ -0.71
LINC00501-201ENST00000425388 ARAP1Q96P48 1450 aa10.61□□□□□ -0.71
LINC00501-201ENST00000425388 FAM9BQ8IZU0 186 aa10.6□□□□□ -0.71
LINC00501-201ENST00000425388 ERCC6Q03468 1493 aa10.6□□□□□ -0.71
LINC00501-201ENST00000425388 LMOD2Q6P5Q4 547 aa10.6□□□□□ -0.71
LINC00501-201ENST00000425388 TERF1P54274 439 aa10.59□□□□□ -0.71
LINC00501-201ENST00000425388 THOC2Q8NI27 1593 aaKnown RBP10.59□□□□□ -0.71
LINC00501-201ENST00000425388 MAP3K1Q13233 1512 aa10.59□□□□□ -0.71
LINC00501-201ENST00000425388 RGS3P49796 1198 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms