RNA–Protein interactions for RNA: ENST00000425203.1

LIMK2-205, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best)

Gene LIMK2, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-205ENST00000425203 CDK11AQ9UQ88 783 aaPredicted RBP25.02■■□□□ 1.6
LIMK2-205ENST00000425203 UBTFP17480 764 aaKnown RBP25.01■■□□□ 1.59
LIMK2-205ENST00000425203 CDK13Q14004 1512 aaKnown RBP25.01■■□□□ 1.59
LIMK2-205ENST00000425203 HECW1Q76N89 1606 aa24.98■■□□□ 1.59
LIMK2-205ENST00000425203 FMN1Q68DA7 1419 aa24.96■■□□□ 1.59
LIMK2-205ENST00000425203 ATP10AO60312 1499 aa24.96■■□□□ 1.59
LIMK2-205ENST00000425203 EHMT2Q96KQ7 1210 aa24.94■■□□□ 1.58
LIMK2-205ENST00000425203 SIGLEC1Q9BZZ2 1709 aa24.93■■□□□ 1.58
LIMK2-205ENST00000425203 CERKQ8TCT0 537 aa24.91■■□□□ 1.58
LIMK2-205ENST00000425203 C9orf84Q5VXU9 1444 aa24.88■■□□□ 1.57
LIMK2-205ENST00000425203 AFAP1Q8N556 730 aa24.88■■□□□ 1.57
LIMK2-205ENST00000425203 CEBPAP49715 358 aaPredicted RBP24.87■■□□□ 1.57
LIMK2-205ENST00000425203 ARHGEF12Q9NZN5 1544 aa24.86■■□□□ 1.57
LIMK2-205ENST00000425203 ARHGAP35Q9NRY4 1499 aa24.86■■□□□ 1.57
LIMK2-205ENST00000425203 FER1L4A9Z1Z3 1794 aa24.85■■□□□ 1.57
LIMK2-205ENST00000425203 MYT1LQ9UL68 1186 aa24.84■■□□□ 1.57
LIMK2-205ENST00000425203 TROQ12816 1431 aaPredicted RBP24.84■■□□□ 1.57
LIMK2-205ENST00000425203 ZNF518AQ6AHZ1 1483 aa24.83■■□□□ 1.57
LIMK2-205ENST00000425203 MYO5CQ9NQX4 1742 aa24.83■■□□□ 1.57
LIMK2-205ENST00000425203 DMRT2Q9Y5R5 561 aa24.82■■□□□ 1.56
LIMK2-205ENST00000425203 CLIP1P30622 1438 aa24.81■■□□□ 1.56
LIMK2-205ENST00000425203 ARHGAP5Q13017 1502 aa24.78■■□□□ 1.56
LIMK2-205ENST00000425203 KIF14Q15058 1648 aa24.78■■□□□ 1.56
LIMK2-205ENST00000425203 SETD1BQ9UPS6 1966 aaKnown RBP24.76■■□□□ 1.55
LIMK2-205ENST00000425203 KDM5CP41229 1560 aa24.75■■□□□ 1.55
LIMK2-205ENST00000425203 CHIC1Q5VXU3 224 aa24.74■■□□□ 1.55
LIMK2-205ENST00000425203 PREX1Q8TCU6 1659 aa24.73■■□□□ 1.55
LIMK2-205ENST00000425203 MLH3Q9UHC1 1453 aa24.72■■□□□ 1.55
LIMK2-205ENST00000425203 ESF1Q9H501 851 aaKnown RBP24.72■■□□□ 1.55
LIMK2-205ENST00000425203 UHRF1BP1Q6BDS2 1440 aa24.71■■□□□ 1.55
LIMK2-205ENST00000425203 REREQ9P2R6 1566 aa24.67■■□□□ 1.54
LIMK2-205ENST00000425203 DIP2CQ9Y2E4 1556 aa24.67■■□□□ 1.54
LIMK2-205ENST00000425203 TRAPPC8Q9Y2L5 1435 aa24.66■■□□□ 1.54
LIMK2-205ENST00000425203 CDC42BPBQ9Y5S2 1711 aa24.65■■□□□ 1.54
LIMK2-205ENST00000425203 CASKIN1Q8WXD9 1431 aa24.64■■□□□ 1.54
LIMK2-205ENST00000425203 STRCQ7RTU9 1775 aa24.63■■□□□ 1.53
LIMK2-205ENST00000425203 AGLP35573 1532 aa24.63■■□□□ 1.53
LIMK2-205ENST00000425203 LRRIQ1Q96JM4 1722 aa24.62■■□□□ 1.53
LIMK2-205ENST00000425203 CCDC18Q5T9S5 1454 aa24.62■■□□□ 1.53
LIMK2-205ENST00000425203 PTPRTO14522 1441 aa24.6■■□□□ 1.53
LIMK2-205ENST00000425203 ABCA6Q8N139 1617 aa24.59■■□□□ 1.53
LIMK2-205ENST00000425203 ABCC1P33527 1531 aa24.58■■□□□ 1.53
LIMK2-205ENST00000425203 PREX2Q70Z35 1606 aa24.57■■□□□ 1.52
LIMK2-205ENST00000425203 ZNF777Q9ULD5 760 aaPredicted RBP24.57■■□□□ 1.52
LIMK2-205ENST00000425203 CNTLNQ9NXG0 1405 aa24.57■■□□□ 1.52
LIMK2-205ENST00000425203 C3P01024 1663 aa24.56■■□□□ 1.52
LIMK2-205ENST00000425203 KIDINS220Q9ULH0 1771 aa24.52■■□□□ 1.52
LIMK2-205ENST00000425203 HNRNPMP52272 730 aaKnown RBP eCLIP24.52■■□□□ 1.52
LIMK2-205ENST00000425203 SPAG9O60271 1321 aaKnown RBP24.52■■□□□ 1.52
LIMK2-205ENST00000425203 ITSN2Q9NZM3 1697 aa24.52■■□□□ 1.52
LIMK2-205ENST00000425203 DISP3Q9P2K9 1392 aa24.51■■□□□ 1.51
LIMK2-205ENST00000425203 ZMYM3Q14202 1370 aa24.49■■□□□ 1.51
LIMK2-205ENST00000425203 CDC42BPAQ5VT25 1732 aa24.48■■□□□ 1.51
LIMK2-205ENST00000425203 FYCO1Q9BQS8 1478 aa24.48■■□□□ 1.51
LIMK2-205ENST00000425203 SAMD9LQ8IVG5 1584 aa24.47■■□□□ 1.51
LIMK2-205ENST00000425203 GPATCH8Q9UKJ3 1502 aaKnown RBP24.47■■□□□ 1.51
LIMK2-205ENST00000425203 NPATQ14207 1427 aa24.47■■□□□ 1.51
LIMK2-205ENST00000425203 CFDP1Q9UEE9 299 aaPredicted RBP24.47■■□□□ 1.51
LIMK2-205ENST00000425203 NCOA1Q15788 1441 aa24.46■■□□□ 1.51
LIMK2-205ENST00000425203 ILDR2Q71H61 639 aa24.44■■□□□ 1.5
LIMK2-205ENST00000425203 KIAA1107Q9UPP5 1409 aa24.44■■□□□ 1.5
LIMK2-205ENST00000425203 LTBP4Q8N2S1 1624 aa24.43■■□□□ 1.5
LIMK2-205ENST00000425203 SYCP2Q9BX26 1530 aa24.4■■□□□ 1.5
LIMK2-205ENST00000425203 PLEKHH2Q8IVE3 1493 aa24.4■■□□□ 1.5
LIMK2-205ENST00000425203 CCNB3Q8WWL7 1395 aa24.4■■□□□ 1.5
LIMK2-205ENST00000425203 IQSEC2Q5JU85 1478 aa24.39■■□□□ 1.5
LIMK2-205ENST00000425203 NCKAP5LQ9HCH0 1330 aa24.39■■□□□ 1.5
LIMK2-205ENST00000425203 GGT6Q6P531 493 aa24.39■■□□□ 1.49
LIMK2-205ENST00000425203 PPP6R1Q9UPN7 881 aa24.39■■□□□ 1.49
LIMK2-205ENST00000425203 MROH2AA6NES4 1674 aa24.38■■□□□ 1.49
LIMK2-205ENST00000425203 SOCS7O14512 581 aa24.38■■□□□ 1.49
LIMK2-205ENST00000425203 CAMSAP1Q5T5Y3 1602 aa24.38■■□□□ 1.49
LIMK2-205ENST00000425203 PKD2Q13563 968 aa24.37■■□□□ 1.49
LIMK2-205ENST00000425203 A2MP01023 1474 aa24.36■■□□□ 1.49
LIMK2-205ENST00000425203 ATP7AQ04656 1500 aa24.35■■□□□ 1.49
LIMK2-205ENST00000425203 SUPT6HQ7KZ85 1726 aaKnown RBP24.35■■□□□ 1.49
LIMK2-205ENST00000425203 MTUS2Q5JR59 1369 aa24.34■■□□□ 1.49
LIMK2-205ENST00000425203 PTPRKQ15262 1439 aa24.31■■□□□ 1.48
LIMK2-205ENST00000425203 ZNF335Q9H4Z2 1342 aaPredicted RBP24.31■■□□□ 1.48
LIMK2-205ENST00000425203 PLXNC1O60486 1568 aa24.3■■□□□ 1.48
LIMK2-205ENST00000425203 ZNF644Q9H582 1327 aaPredicted RBP24.29■■□□□ 1.48
LIMK2-205ENST00000425203 INO80Q9ULG1 1556 aaPredicted RBP24.29■■□□□ 1.48
LIMK2-205ENST00000425203 PLA2R1Q13018 1463 aa24.28■■□□□ 1.48
LIMK2-205ENST00000425203 CLTCQ00610 1675 aaKnown RBP24.27■■□□□ 1.48
LIMK2-205ENST00000425203 UBAP1LF5GYI3 381 aa24.27■■□□□ 1.48
LIMK2-205ENST00000425203 RTEL1-TNFRSF6BF6WH68 1400 aa24.24■■□□□ 1.47
LIMK2-205ENST00000425203 TCOF1Q13428 1488 aaKnown RBP24.24■■□□□ 1.47
LIMK2-205ENST00000425203 DHX29Q7Z478 1369 aaKnown RBP24.23■■□□□ 1.47
LIMK2-205ENST00000425203 MBD5Q9P267 1494 aa24.23■■□□□ 1.47
LIMK2-205ENST00000425203 CEP170BQ9Y4F5 1589 aaPredicted RBP24.22■■□□□ 1.47
LIMK2-205ENST00000425203 SPATA31D1Q6ZQQ2 1576 aa24.21■■□□□ 1.47
LIMK2-205ENST00000425203 ZNF142P52746 1687 aaPredicted RBP24.21■■□□□ 1.47
LIMK2-205ENST00000425203 MYO3AQ8NEV4 1616 aa24.21■■□□□ 1.47
LIMK2-205ENST00000425203 ADGBQ8N7X0 1667 aa24.19■■□□□ 1.46
LIMK2-205ENST00000425203 RSPH4AQ5TD94 716 aa24.19■■□□□ 1.46
LIMK2-205ENST00000425203 KIF3BO15066 747 aa24.18■■□□□ 1.46
LIMK2-205ENST00000425203 A2ML1A8K2U0 1454 aa24.17■■□□□ 1.46
LIMK2-205ENST00000425203 CEP162Q5TB80 1403 aa24.17■■□□□ 1.46
LIMK2-205ENST00000425203 FBXO31Q5XUX0 539 aaPredicted RBP24.16■■□□□ 1.46
LIMK2-205ENST00000425203 TIAM1Q13009 1591 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms