RNA–Protein interactions for RNA: ENST00000425020.6

VPS37A-202, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 4,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-202ENST00000425020 ERCC6Q03468 1493 aa13.35□□□□□ -0.27
VPS37A-202ENST00000425020 CCDC18Q5T9S5 1454 aa13.35□□□□□ -0.27
VPS37A-202ENST00000425020 GGT6Q6P531 493 aa13.34□□□□□ -0.27
VPS37A-202ENST00000425020 FGD5Q6ZNL6 1462 aa13.33□□□□□ -0.27
VPS37A-202ENST00000425020 SOX12O15370 315 aa13.33□□□□□ -0.28
VPS37A-202ENST00000425020 EXOC6Q8TAG9 804 aa13.33□□□□□ -0.28
VPS37A-202ENST00000425020 STK26Q9P289 416 aa13.33□□□□□ -0.28
VPS37A-202ENST00000425020 ZBTB7CA1YPR0 619 aa13.33□□□□□ -0.28
VPS37A-202ENST00000425020 FTSJ3Q8IY81 847 aaKnown RBP13.33□□□□□ -0.28
VPS37A-202ENST00000425020 CLUAP1Q96AJ1 413 aa13.32□□□□□ -0.28
VPS37A-202ENST00000425020 FANCD2Q9BXW9 1451 aa13.31□□□□□ -0.28
VPS37A-202ENST00000425020 JPH4Q96JJ6 628 aa13.3□□□□□ -0.28
VPS37A-202ENST00000425020 KIF7Q2M1P5 1343 aa13.29□□□□□ -0.28
VPS37A-202ENST00000425020 DDRGK1Q96HY6 314 aa13.29□□□□□ -0.28
VPS37A-202ENST00000425020 KTN1Q86UP2 1357 aaKnown RBP13.29□□□□□ -0.28
VPS37A-202ENST00000425020 CDCA8Q53HL2 280 aa13.29□□□□□ -0.28
VPS37A-202ENST00000425020 SLKQ9H2G2 1235 aaPredicted RBP13.29□□□□□ -0.28
VPS37A-202ENST00000425020 RRP7AQ9Y3A4 280 aaKnown RBP13.29□□□□□ -0.28
VPS37A-202ENST00000425020 LRRC9Q6ZRR7 1453 aa13.28□□□□□ -0.28
VPS37A-202ENST00000425020 PANK3Q9H999 370 aa13.28□□□□□ -0.28
VPS37A-202ENST00000425020 MLECQ14165 292 aa13.28□□□□□ -0.28
VPS37A-202ENST00000425020 NBPF8Q3BBV2 869 aa13.28□□□□□ -0.28
VPS37A-202ENST00000425020 C14orf37Q86TY3 774 aa13.28□□□□□ -0.28
VPS37A-202ENST00000425020 BCL2L13Q9BXK5 485 aa13.28□□□□□ -0.28
VPS37A-202ENST00000425020 PDS5BQ9NTI5 1447 aa13.28□□□□□ -0.28
VPS37A-202ENST00000425020 CFAP53Q96M91 514 aa13.27□□□□□ -0.28
VPS37A-202ENST00000425020 FGD6Q6ZV73 1430 aa13.27□□□□□ -0.28
VPS37A-202ENST00000425020 DNAJC5BQ9UF47 199 aa13.27□□□□□ -0.29
VPS37A-202ENST00000425020 MORC1Q86VD1 984 aa13.26□□□□□ -0.29
VPS37A-202ENST00000425020 POGKQ9P215 609 aa13.26□□□□□ -0.29
VPS37A-202ENST00000425020 ANKRD30AQ9BXX3 1397 aa13.26□□□□□ -0.29
VPS37A-202ENST00000425020 NLRP13Q86W25 1043 aa13.25□□□□□ -0.29
VPS37A-202ENST00000425020 USP47Q96K76 1375 aa13.25□□□□□ -0.29
VPS37A-202ENST00000425020 KIF3BO15066 747 aa13.24□□□□□ -0.29
VPS37A-202ENST00000425020 SRPK2P78362 688 aaKnown RBP13.24□□□□□ -0.29
VPS37A-202ENST00000425020 BECN1Q14457 450 aa13.24□□□□□ -0.29
VPS37A-202ENST00000425020 IPO9Q96P70 1041 aaKnown RBP13.24□□□□□ -0.29
VPS37A-202ENST00000425020 NCLP19338 710 aaKnown RBP13.23□□□□□ -0.29
VPS37A-202ENST00000425020 MAPK8IP3Q9UPT6 1336 aa13.23□□□□□ -0.29
VPS37A-202ENST00000425020 RALBP1Q15311 655 aa13.23□□□□□ -0.29
VPS37A-202ENST00000425020 CDCA7LQ96GN5 454 aa13.23□□□□□ -0.29
VPS37A-202ENST00000425020 RRBP1Q9P2E9 1410 aaKnown RBP13.23□□□□□ -0.29
VPS37A-202ENST00000425020 ZBED9Q6R2W3 1325 aa13.23□□□□□ -0.29
VPS37A-202ENST00000425020 APBB1O00213 710 aa13.23□□□□□ -0.29
VPS37A-202ENST00000425020 U2AF1L5P0DN76 240 aaPredicted RBP13.23□□□□□ -0.29
VPS37A-202ENST00000425020 U2AF1Q01081 240 aaKnown RBP eCLIP13.23□□□□□ -0.29
VPS37A-202ENST00000425020 WDR97A6NE52 1622 aa13.22□□□□□ -0.29
VPS37A-202ENST00000425020 PRXQ9BXM0 1461 aa13.22□□□□□ -0.29
VPS37A-202ENST00000425020 C11orf95C9JLR9 678 aaPredicted RBP13.22□□□□□ -0.29
VPS37A-202ENST00000425020 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.22□□□□□ -0.29
VPS37A-202ENST00000425020 GZF1Q9H116 711 aaPredicted RBP13.22□□□□□ -0.29
VPS37A-202ENST00000425020 CCDC7Q96M83 1385 aa13.22□□□□□ -0.29
VPS37A-202ENST00000425020 ANP32BQ92688 251 aaKnown RBP13.21□□□□□ -0.29
VPS37A-202ENST00000425020 TRAK1Q9UPV9 953 aa13.21□□□□□ -0.29
VPS37A-202ENST00000425020 CRBNQ96SW2 442 aa13.21□□□□□ -0.3
VPS37A-202ENST00000425020 AQRO60306 1485 aaKnown RBP eCLIP13.2□□□□□ -0.3
VPS37A-202ENST00000425020 MYH16Q9H6N6 1097 aa13.2□□□□□ -0.3
VPS37A-202ENST00000425020 NESP48681 1621 aa13.2□□□□□ -0.3
VPS37A-202ENST00000425020 CFTRP13569 1480 aa13.2□□□□□ -0.3
VPS37A-202ENST00000425020 ERICH6BQ5W0A0 696 aa13.19□□□□□ -0.3
VPS37A-202ENST00000425020 PDE4AP27815 886 aa13.19□□□□□ -0.3
VPS37A-202ENST00000425020 UACAQ9BZF9 1416 aa13.18□□□□□ -0.3
VPS37A-202ENST00000425020 GOLGA2Q08379 1002 aa13.18□□□□□ -0.3
VPS37A-202ENST00000425020 APAF1O14727 1248 aa13.18□□□□□ -0.3
VPS37A-202ENST00000425020 RRP1P56182 461 aaKnown RBP13.18□□□□□ -0.3
VPS37A-202ENST00000425020 SKAP1Q86WV1 359 aa13.18□□□□□ -0.3
VPS37A-202ENST00000425020 TCERG1O14776 1098 aaKnown RBP13.17□□□□□ -0.3
VPS37A-202ENST00000425020 NBPF1Q3BBV0 1214 aa13.17□□□□□ -0.3
VPS37A-202ENST00000425020 MYOM3Q5VTT5 1437 aa13.17□□□□□ -0.3
VPS37A-202ENST00000425020 MYBBP1AQ9BQG0 1328 aaKnown RBP13.17□□□□□ -0.3
VPS37A-202ENST00000425020 ARID4BQ4LE39 1312 aaPredicted RBP13.17□□□□□ -0.3
VPS37A-202ENST00000425020 CUX1P39880 1505 aa13.17□□□□□ -0.3
VPS37A-202ENST00000425020 PAK3O75914 559 aaPredicted RBP13.16□□□□□ -0.3
VPS37A-202ENST00000425020 NCOA2Q15596 1464 aa13.16□□□□□ -0.3
VPS37A-202ENST00000425020 GAPVD1Q14C86 1478 aa13.16□□□□□ -0.3
VPS37A-202ENST00000425020 CARMIL2Q6F5E8 1435 aa13.15□□□□□ -0.3
VPS37A-202ENST00000425020 EFCAB2Q5VUJ9 269 aa13.15□□□□□ -0.3
VPS37A-202ENST00000425020 AKNAQ7Z591 1439 aa13.15□□□□□ -0.3
VPS37A-202ENST00000425020 NUTM2FA1L443 756 aa13.15□□□□□ -0.3
VPS37A-202ENST00000425020 ELL2O00472 640 aaPredicted RBP13.14□□□□□ -0.31
VPS37A-202ENST00000425020 COG6Q9Y2V7 657 aa13.14□□□□□ -0.31
VPS37A-202ENST00000425020 KIF15Q9NS87 1388 aa13.13□□□□□ -0.31
VPS37A-202ENST00000425020 NCAPD3P42695 1498 aa13.13□□□□□ -0.31
VPS37A-202ENST00000425020 ITPRIPQ8IWB1 547 aa13.12□□□□□ -0.31
VPS37A-202ENST00000425020 LMOD2Q6P5Q4 547 aa13.12□□□□□ -0.31
VPS37A-202ENST00000425020 FOXD4L1Q9NU39 408 aa13.12□□□□□ -0.31
VPS37A-202ENST00000425020 CCDC144AA2RUR9 1427 aa13.11□□□□□ -0.31
VPS37A-202ENST00000425020 MFAP1P55081 439 aaKnown RBP13.11□□□□□ -0.31
VPS37A-202ENST00000425020 TRIM44Q96DX7 344 aaPredicted RBP13.1□□□□□ -0.31
VPS37A-202ENST00000425020 TAOK2Q9UL54 1235 aa13.1□□□□□ -0.31
VPS37A-202ENST00000425020 SPAG9O60271 1321 aaKnown RBP13.1□□□□□ -0.31
VPS37A-202ENST00000425020 CNTLNQ9NXG0 1405 aa13.1□□□□□ -0.31
VPS37A-202ENST00000425020 MSH5O43196 834 aa13.09□□□□□ -0.31
VPS37A-202ENST00000425020 ADAMTS8Q9UP79 889 aa13.09□□□□□ -0.31
VPS37A-202ENST00000425020 A0A0G2JS52 829 aa13.09□□□□□ -0.31
VPS37A-202ENST00000425020 FANCIQ9NVI1 1328 aa13.09□□□□□ -0.31
VPS37A-202ENST00000425020 HSP90AB1P08238 724 aaKnown RBP13.09□□□□□ -0.31
VPS37A-202ENST00000425020 CASKIN1Q8WXD9 1431 aa13.09□□□□□ -0.31
VPS37A-202ENST00000425020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.08□□□□□ -0.324e-7■■■□□ 14.7
VPS37A-202ENST00000425020 SMC4Q9NTJ3 1288 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms