RNA–Protein interactions for RNA: ENST00000424932.2

CKS1BP6-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 6, humanhuman

BASIC

Gene CKS1BP6, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP6-201ENST00000424932 ARHGEF5Q12774 1597 aa6.98□□□□□ -1.29
CKS1BP6-201ENST00000424932 PLB1Q6P1J6 1458 aa6.98□□□□□ -1.29
CKS1BP6-201ENST00000424932 ABCC10Q5T3U5 1492 aa6.97□□□□□ -1.29
CKS1BP6-201ENST00000424932 GPATCH8Q9UKJ3 1502 aaKnown RBP6.96□□□□□ -1.29
CKS1BP6-201ENST00000424932 TONSLQ96HA7 1378 aa6.96□□□□□ -1.29
CKS1BP6-201ENST00000424932 PPP1R15AO75807 674 aaPredicted RBP6.96□□□□□ -1.3
CKS1BP6-201ENST00000424932 CDK11AQ9UQ88 783 aaPredicted RBP6.96□□□□□ -1.3
CKS1BP6-201ENST00000424932 KDM5DQ9BY66 1539 aa6.96□□□□□ -1.3
CKS1BP6-201ENST00000424932 CDC42BPBQ9Y5S2 1711 aa6.96□□□□□ -1.3
CKS1BP6-201ENST00000424932 SIN3AQ96ST3 1273 aa6.95□□□□□ -1.3
CKS1BP6-201ENST00000424932 TEX14Q8IWB6 1497 aa6.95□□□□□ -1.3
CKS1BP6-201ENST00000424932 PRG4Q92954 1404 aaPredicted RBP6.94□□□□□ -1.3
CKS1BP6-201ENST00000424932 RPRD2Q5VT52 1461 aaKnown RBP6.94□□□□□ -1.3
CKS1BP6-201ENST00000424932 PELP1Q8IZL8 1130 aaKnown RBP6.94□□□□□ -1.3
CKS1BP6-201ENST00000424932 MAST1Q9Y2H9 1570 aa6.94□□□□□ -1.3
CKS1BP6-201ENST00000424932 MYO5CQ9NQX4 1742 aa6.93□□□□□ -1.3
CKS1BP6-201ENST00000424932 CHMP7Q8WUX9 453 aaPredicted RBP6.93□□□□□ -1.3
CKS1BP6-201ENST00000424932 GTF3C3Q9Y5Q9 886 aa6.93□□□□□ -1.3
CKS1BP6-201ENST00000424932 ATP10BO94823 1461 aa6.92□□□□□ -1.3
CKS1BP6-201ENST00000424932 PZPP20742 1482 aa6.92□□□□□ -1.3
CKS1BP6-201ENST00000424932 NCOA1Q15788 1441 aa6.92□□□□□ -1.3
CKS1BP6-201ENST00000424932 MBD5Q9P267 1494 aa6.92□□□□□ -1.3
CKS1BP6-201ENST00000424932 CLASP1Q7Z460 1538 aa6.91□□□□□ -1.3
CKS1BP6-201ENST00000424932 PLXNC1O60486 1568 aa6.91□□□□□ -1.3
CKS1BP6-201ENST00000424932 SAMD9LQ8IVG5 1584 aa6.91□□□□□ -1.3
CKS1BP6-201ENST00000424932 JPH4Q96JJ6 628 aa6.91□□□□□ -1.3
CKS1BP6-201ENST00000424932 ANKRD30BQ9BXX2 1392 aa6.91□□□□□ -1.3
CKS1BP6-201ENST00000424932 ABCC2Q92887 1545 aa6.91□□□□□ -1.3
CKS1BP6-201ENST00000424932 UNC13BO14795 1591 aa6.91□□□□□ -1.3
CKS1BP6-201ENST00000424932 ARHGEF12Q9NZN5 1544 aa6.9□□□□□ -1.31
CKS1BP6-201ENST00000424932 YTHDC1Q96MU7 727 aaKnown RBP6.89□□□□□ -1.31
CKS1BP6-201ENST00000424932 RRP7BPQ9NSQ0 103 aa6.89□□□□□ -1.31
CKS1BP6-201ENST00000424932 PTPRGP23470 1445 aa6.89□□□□□ -1.31
CKS1BP6-201ENST00000424932 TTC37Q6PGP7 1564 aa6.89□□□□□ -1.31
CKS1BP6-201ENST00000424932 CCDC141Q6ZP82 1450 aa6.88□□□□□ -1.31
CKS1BP6-201ENST00000424932 C9orf84Q5VXU9 1444 aa6.88□□□□□ -1.31
CKS1BP6-201ENST00000424932 KIAA1107Q9UPP5 1409 aa6.88□□□□□ -1.31
CKS1BP6-201ENST00000424932 ANKRD30AQ9BXX3 1397 aa6.88□□□□□ -1.31
CKS1BP6-201ENST00000424932 CCER2I3L3R5 266 aa6.88□□□□□ -1.31
CKS1BP6-201ENST00000424932 MPHOSPH9Q99550 1183 aa6.88□□□□□ -1.31
CKS1BP6-201ENST00000424932 ZCCHC11Q5TAX3 1644 aaKnown RBP6.87□□□□□ -1.31
CKS1BP6-201ENST00000424932 UHRF1BP1LA0JNW5 1464 aa6.87□□□□□ -1.31
CKS1BP6-201ENST00000424932 CFDP1Q9UEE9 299 aaPredicted RBP6.87□□□□□ -1.31
CKS1BP6-201ENST00000424932 IQGAP3Q86VI3 1631 aa6.87□□□□□ -1.31
CKS1BP6-201ENST00000424932 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.86□□□□□ -1.31
CKS1BP6-201ENST00000424932 ARAP3Q8WWN8 1544 aa6.86□□□□□ -1.31
CKS1BP6-201ENST00000424932 PLEKHH2Q8IVE3 1493 aa6.86□□□□□ -1.31
CKS1BP6-201ENST00000424932 ANKRD50Q9ULJ7 1429 aa6.86□□□□□ -1.31
CKS1BP6-201ENST00000424932 ZNF644Q9H582 1327 aaPredicted RBP6.86□□□□□ -1.31
CKS1BP6-201ENST00000424932 CHIC2Q9UKJ5 165 aa6.86□□□□□ -1.31
CKS1BP6-201ENST00000424932 KDM5CP41229 1560 aa6.86□□□□□ -1.31
CKS1BP6-201ENST00000424932 MAGI2Q86UL8 1455 aa6.85□□□□□ -1.31
CKS1BP6-201ENST00000424932 SPATA31E1Q6ZUB1 1445 aa6.85□□□□□ -1.31
CKS1BP6-201ENST00000424932 LAMC1P11047 1609 aa6.85□□□□□ -1.31
CKS1BP6-201ENST00000424932 UHRF1BP1Q6BDS2 1440 aa6.84□□□□□ -1.31
CKS1BP6-201ENST00000424932 CNTLNQ9NXG0 1405 aa6.84□□□□□ -1.31
CKS1BP6-201ENST00000424932 ERCC6L2Q5T890 1561 aa6.84□□□□□ -1.31
CKS1BP6-201ENST00000424932 PLEKHD1A6NEE1 506 aa6.84□□□□□ -1.31
CKS1BP6-201ENST00000424932 ARID3CA6NKF2 412 aa6.84□□□□□ -1.31
CKS1BP6-201ENST00000424932 DDX10Q13206 875 aaKnown RBP6.84□□□□□ -1.31
CKS1BP6-201ENST00000424932 TRIM52Q96A61 297 aa6.84□□□□□ -1.31
CKS1BP6-201ENST00000424932 SYCP2Q9BX26 1530 aa6.84□□□□□ -1.31
CKS1BP6-201ENST00000424932 RALGAPBQ86X10 1494 aa6.84□□□□□ -1.31
CKS1BP6-201ENST00000424932 E9PCH4 1651 aa6.84□□□□□ -1.32
CKS1BP6-201ENST00000424932 ABCC1P33527 1531 aa6.83□□□□□ -1.32
CKS1BP6-201ENST00000424932 FAM135AQ9P2D6 1515 aa6.83□□□□□ -1.32
CKS1BP6-201ENST00000424932 FBLN2P98095 1184 aa6.83□□□□□ -1.32
CKS1BP6-201ENST00000424932 TRPM1Q7Z4N2 1603 aa6.83□□□□□ -1.32
CKS1BP6-201ENST00000424932 ARHGAP5Q13017 1502 aa6.82□□□□□ -1.32
CKS1BP6-201ENST00000424932 BCORL1Q5H9F3 1711 aa6.82□□□□□ -1.32
CKS1BP6-201ENST00000424932 RSPH4AQ5TD94 716 aa6.82□□□□□ -1.32
CKS1BP6-201ENST00000424932 L3MBTL2Q969R5 705 aa6.82□□□□□ -1.32
CKS1BP6-201ENST00000424932 DEPDC5O75140 1603 aa6.82□□□□□ -1.32
CKS1BP6-201ENST00000424932 KIF15Q9NS87 1388 aa6.82□□□□□ -1.32
CKS1BP6-201ENST00000424932 DUOX2Q9NRD8 1548 aa6.81□□□□□ -1.32
CKS1BP6-201ENST00000424932 ABCA9Q8IUA7 1624 aa6.81□□□□□ -1.32
CKS1BP6-201ENST00000424932 EIF2AK4Q9P2K8 1649 aaKnown RBP6.81□□□□□ -1.32
CKS1BP6-201ENST00000424932 ANP32CO43423 234 aa6.81□□□□□ -1.32
CKS1BP6-201ENST00000424932 EIF4G2P78344 907 aaKnown RBP eCLIP6.81□□□□□ -1.32
CKS1BP6-201ENST00000424932 SLC4A1APQ9BWU0 796 aaKnown RBP6.81□□□□□ -1.32
CKS1BP6-201ENST00000424932 CCDC7Q96M83 1385 aa6.81□□□□□ -1.32
CKS1BP6-201ENST00000424932 WASHC2AQ641Q2 1341 aa6.8□□□□□ -1.32
CKS1BP6-201ENST00000424932 ATP10AO60312 1499 aa6.8□□□□□ -1.32
CKS1BP6-201ENST00000424932 RNF17Q9BXT8 1623 aaKnown RBP6.8□□□□□ -1.32
CKS1BP6-201ENST00000424932 HSPA5P11021 654 aaKnown RBP6.8□□□□□ -1.32
CKS1BP6-201ENST00000424932 ERBINQ96RT1 1412 aa6.8□□□□□ -1.32
CKS1BP6-201ENST00000424932 INO80Q9ULG1 1556 aaPredicted RBP6.8□□□□□ -1.32
CKS1BP6-201ENST00000424932 CEP152O94986 1710 aa6.79□□□□□ -1.32
CKS1BP6-201ENST00000424932 ARID4BQ4LE39 1312 aaPredicted RBP6.78□□□□□ -1.32
CKS1BP6-201ENST00000424932 PLCH2O75038 1416 aa6.78□□□□□ -1.32
CKS1BP6-201ENST00000424932 ZFYVE16Q7Z3T8 1539 aa6.78□□□□□ -1.32
CKS1BP6-201ENST00000424932 KCNH8Q96L42 1107 aa6.78□□□□□ -1.32
CKS1BP6-201ENST00000424932 SPHKAPQ2M3C7 1700 aa6.78□□□□□ -1.32
CKS1BP6-201ENST00000424932 WDR7Q9Y4E6 1490 aa6.78□□□□□ -1.32
CKS1BP6-201ENST00000424932 NEURL4Q96JN8 1562 aa6.78□□□□□ -1.32
CKS1BP6-201ENST00000424932 TET3O43151 1660 aa6.77□□□□□ -1.32
CKS1BP6-201ENST00000424932 FOXD1Q16676 465 aa6.77□□□□□ -1.33
CKS1BP6-201ENST00000424932 NBPF8Q3BBV2 869 aa6.77□□□□□ -1.33
CKS1BP6-201ENST00000424932 HIRIP3Q9BW71 556 aaPredicted RBP6.77□□□□□ -1.33
CKS1BP6-201ENST00000424932 ZNF777Q9ULD5 760 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms