RNA–Protein interactions for RNA: ENST00000423927.2

KNTC1-203, Transcript of kinetochore associated 1, humanhuman

TSL 4

Gene KNTC1, Length 1,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-203ENST00000423927 AKNAQ7Z591 1439 aa14.4□□□□□ -0.1
KNTC1-203ENST00000423927 IQSEC2Q5JU85 1478 aa14.39□□□□□ -0.11
KNTC1-203ENST00000423927 RAPGEF2Q9Y4G8 1499 aa14.39□□□□□ -0.11
KNTC1-203ENST00000423927 RICTORQ6R327 1708 aa14.39□□□□□ -0.11
KNTC1-203ENST00000423927 MLECQ14165 292 aa14.39□□□□□ -0.11
KNTC1-203ENST00000423927 ARID3CA6NKF2 412 aa14.37□□□□□ -0.11
KNTC1-203ENST00000423927 DENND4BO75064 1496 aaPredicted RBP14.37□□□□□ -0.11
KNTC1-203ENST00000423927 PTPRTO14522 1441 aa14.36□□□□□ -0.11
KNTC1-203ENST00000423927 EFCAB5A4FU69 1503 aa14.34□□□□□ -0.11
KNTC1-203ENST00000423927 UHRF1BP1Q6BDS2 1440 aa14.33□□□□□ -0.11
KNTC1-203ENST00000423927 ATP10BO94823 1461 aa14.33□□□□□ -0.12
KNTC1-203ENST00000423927 ZFYVE16Q7Z3T8 1539 aa14.32□□□□□ -0.12
KNTC1-203ENST00000423927 CFAP74Q9C0B2 1584 aa14.32□□□□□ -0.12
KNTC1-203ENST00000423927 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.32□□□□□ -0.12
KNTC1-203ENST00000423927 HNRNPUL2Q1KMD3 747 aaKnown RBP14.32□□□□□ -0.12
KNTC1-203ENST00000423927 SIGLEC1Q9BZZ2 1709 aa14.32□□□□□ -0.12
KNTC1-203ENST00000423927 LTBP4Q8N2S1 1624 aa14.31□□□□□ -0.12
KNTC1-203ENST00000423927 FHOD3Q2V2M9 1422 aa14.31□□□□□ -0.12
KNTC1-203ENST00000423927 UBAP1LF5GYI3 381 aa14.3□□□□□ -0.12
KNTC1-203ENST00000423927 CEBPAP49715 358 aaPredicted RBP14.3□□□□□ -0.12
KNTC1-203ENST00000423927 MAGI2Q86UL8 1455 aa14.29□□□□□ -0.12
KNTC1-203ENST00000423927 ZMYM4Q5VZL5 1548 aa14.29□□□□□ -0.12
KNTC1-203ENST00000423927 POTEHQ6S545 545 aa14.27□□□□□ -0.13
KNTC1-203ENST00000423927 ARHGEF12Q9NZN5 1544 aa14.26□□□□□ -0.13
KNTC1-203ENST00000423927 MED1Q15648 1581 aaPredicted RBP14.25□□□□□ -0.13
KNTC1-203ENST00000423927 HECW1Q76N89 1606 aa14.23□□□□□ -0.13
KNTC1-203ENST00000423927 ATP10AO60312 1499 aa14.21□□□□□ -0.13
KNTC1-203ENST00000423927 P3H3Q8IVL6 736 aa14.21□□□□□ -0.13
KNTC1-203ENST00000423927 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.21□□□□□ -0.13
KNTC1-203ENST00000423927 RAPGEF6Q8TEU7 1601 aa14.21□□□□□ -0.13
KNTC1-203ENST00000423927 C9orf84Q5VXU9 1444 aa14.19□□□□□ -0.14
KNTC1-203ENST00000423927 PLEKHD1A6NEE1 506 aa14.19□□□□□ -0.14
KNTC1-203ENST00000423927 C3P01024 1663 aa14.18□□□□□ -0.14
KNTC1-203ENST00000423927 ESF1Q9H501 851 aaKnown RBP14.18□□□□□ -0.14
KNTC1-203ENST00000423927 NCOA1Q15788 1441 aa14.16□□□□□ -0.14
KNTC1-203ENST00000423927 HSPA1LP34931 641 aa14.15□□□□□ -0.14
KNTC1-203ENST00000423927 SUPT6HQ7KZ85 1726 aaKnown RBP14.14□□□□□ -0.15
KNTC1-203ENST00000423927 SCAPERQ9BY12 1400 aa14.14□□□□□ -0.15
KNTC1-203ENST00000423927 ZNF335Q9H4Z2 1342 aaPredicted RBP14.14□□□□□ -0.15
KNTC1-203ENST00000423927 MYT1LQ9UL68 1186 aa14.13□□□□□ -0.15
KNTC1-203ENST00000423927 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.13□□□□□ -0.15
KNTC1-203ENST00000423927 TRAPPC8Q9Y2L5 1435 aa14.13□□□□□ -0.15
KNTC1-203ENST00000423927 PIP4K2BP78356 416 aa14.12□□□□□ -0.15
KNTC1-203ENST00000423927 CAMSAP1Q5T5Y3 1602 aa14.12□□□□□ -0.15
KNTC1-203ENST00000423927 TOM1O60784 492 aa14.11□□□□□ -0.15
KNTC1-203ENST00000423927 NCKAP5LQ9HCH0 1330 aa14.08□□□□□ -0.16
KNTC1-203ENST00000423927 NUP153P49790 1475 aaKnown RBP14.07□□□□□ -0.16
KNTC1-203ENST00000423927 PKD2Q13563 968 aa14.06□□□□□ -0.16
KNTC1-203ENST00000423927 SAMD9Q5K651 1589 aa14.05□□□□□ -0.16
KNTC1-203ENST00000423927 MYO5CQ9NQX4 1742 aa14.04□□□□□ -0.16
KNTC1-203ENST00000423927 EFCAB2Q5VUJ9 269 aa14.04□□□□□ -0.16
KNTC1-203ENST00000423927 PLCH2O75038 1416 aa14.04□□□□□ -0.16
KNTC1-203ENST00000423927 CNTLNQ9NXG0 1405 aa14.03□□□□□ -0.16
KNTC1-203ENST00000423927 ZNF518AQ6AHZ1 1483 aa14.03□□□□□ -0.16
KNTC1-203ENST00000423927 REREQ9P2R6 1566 aa14.01□□□□□ -0.17
KNTC1-203ENST00000423927 NCBP3Q53F19 620 aaKnown RBP14.01□□□□□ -0.17
KNTC1-203ENST00000423927 AGLP35573 1532 aa14□□□□□ -0.17
KNTC1-203ENST00000423927 PRXQ9BXM0 1461 aa13.99□□□□□ -0.17
KNTC1-203ENST00000423927 NPATQ14207 1427 aa13.99□□□□□ -0.17
KNTC1-203ENST00000423927 MROH2AA6NES4 1674 aa13.99□□□□□ -0.17
KNTC1-203ENST00000423927 DIP2CQ9Y2E4 1556 aa13.99□□□□□ -0.17
KNTC1-203ENST00000423927 PLA2R1Q13018 1463 aa13.99□□□□□ -0.17
KNTC1-203ENST00000423927 AFAP1Q8N556 730 aa13.98□□□□□ -0.17
KNTC1-203ENST00000423927 KDM5CP41229 1560 aa13.97□□□□□ -0.17
KNTC1-203ENST00000423927 CPS1P31327 1500 aa13.97□□□□□ -0.17
KNTC1-203ENST00000423927 ZNF142P52746 1687 aaPredicted RBP13.97□□□□□ -0.17
KNTC1-203ENST00000423927 PTPRKQ15262 1439 aa13.97□□□□□ -0.17
KNTC1-203ENST00000423927 ABCA6Q8N139 1617 aa13.95□□□□□ -0.18
KNTC1-203ENST00000423927 TCOF1Q13428 1488 aaKnown RBP13.93□□□□□ -0.18
KNTC1-203ENST00000423927 RANGAP1P46060 587 aaPredicted RBP13.93□□□□□ -0.18
KNTC1-203ENST00000423927 ZMYM3Q14202 1370 aa13.93□□□□□ -0.18
KNTC1-203ENST00000423927 MYO3AQ8NEV4 1616 aa13.93□□□□□ -0.18
KNTC1-203ENST00000423927 DSG3P32926 999 aa13.92□□□□□ -0.18
KNTC1-203ENST00000423927 POLR1AO95602 1720 aaPredicted RBP13.92□□□□□ -0.18
KNTC1-203ENST00000423927 CEP170BQ9Y4F5 1589 aaPredicted RBP13.92□□□□□ -0.18
KNTC1-203ENST00000423927 ARHGAP5Q13017 1502 aa13.91□□□□□ -0.18
KNTC1-203ENST00000423927 MLH3Q9UHC1 1453 aa13.91□□□□□ -0.18
KNTC1-203ENST00000423927 RGS17Q9UGC6 210 aaPredicted RBP13.9□□□□□ -0.18
KNTC1-203ENST00000423927 SHANK2Q9UPX8 1470 aa13.9□□□□□ -0.18
KNTC1-203ENST00000423927 CDK13Q14004 1512 aaKnown RBP13.89□□□□□ -0.19
KNTC1-203ENST00000423927 CLTCQ00610 1675 aaKnown RBP13.88□□□□□ -0.19
KNTC1-203ENST00000423927 CDK11AQ9UQ88 783 aaPredicted RBP13.88□□□□□ -0.19
KNTC1-203ENST00000423927 U3KPZ7 1027 aaPredicted RBP13.87□□□□□ -0.19
KNTC1-203ENST00000423927 KIDINS220Q9ULH0 1771 aa13.86□□□□□ -0.19
KNTC1-203ENST00000423927 KIF14Q15058 1648 aa13.85□□□□□ -0.19
KNTC1-203ENST00000423927 CDC42BPBQ9Y5S2 1711 aa13.84□□□□□ -0.19
KNTC1-203ENST00000423927 SPINK5Q9NQ38 1064 aaPredicted RBP13.84□□□□□ -0.19
KNTC1-203ENST00000423927 ATP1B4Q9UN42 357 aaPredicted RBP13.84□□□□□ -0.19
KNTC1-203ENST00000423927 CAPN15O75808 1086 aa13.83□□□□□ -0.2
KNTC1-203ENST00000423927 DNMT1P26358 1616 aaKnown RBP13.82□□□□□ -0.2
KNTC1-203ENST00000423927 ITSN2Q9NZM3 1697 aa13.82□□□□□ -0.2
KNTC1-203ENST00000423927 NPM3O75607 178 aaKnown RBP13.82□□□□□ -0.2
KNTC1-203ENST00000423927 POTEAQ6S8J7 498 aa13.82□□□□□ -0.2
KNTC1-203ENST00000423927 ALKQ9UM73 1620 aa13.82□□□□□ -0.2
KNTC1-203ENST00000423927 A2ML1A8K2U0 1454 aa13.81□□□□□ -0.2
KNTC1-203ENST00000423927 SETD1AO15047 1707 aaKnown RBP13.81□□□□□ -0.2
KNTC1-203ENST00000423927 CLIP1P30622 1438 aa13.8□□□□□ -0.2
KNTC1-203ENST00000423927 ANKLE2Q86XL3 938 aa13.79□□□□□ -0.2
KNTC1-203ENST00000423927 NEURL4Q96JN8 1562 aa13.79□□□□□ -0.2
KNTC1-203ENST00000423927 VWDEQ8N2E2 1590 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms