RNA–Protein interactions for RNA: ENST00000423662.6

PRDM10-204, Transcript of PR/SET domain 10, humanhuman

TSL 1 (best) BASIC

Gene PRDM10, Length 5,998 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM10-204ENST00000423662 DCAF11Q8TEB1 546 aa17.69■□□□□ 0.42
PRDM10-204ENST00000423662 SPRYD3Q8NCJ5 442 aa17.69■□□□□ 0.42
PRDM10-204ENST00000423662 RTF1Q92541 710 aaKnown RBP17.68■□□□□ 0.42
PRDM10-204ENST00000423662 SRPK2P78362 688 aaKnown RBP17.66■□□□□ 0.42
PRDM10-204ENST00000423662 SYAP1Q96A49 352 aaPredicted RBP17.66■□□□□ 0.42
PRDM10-204ENST00000423662 CALD1Q05682 793 aaKnown RBP17.65■□□□□ 0.42
PRDM10-204ENST00000423662 RWDD1Q9H446 243 aaPredicted RBP17.65■□□□□ 0.42
PRDM10-204ENST00000423662 KTN1Q86UP2 1357 aaKnown RBP17.65■□□□□ 0.42
PRDM10-204ENST00000423662 RBM19Q9Y4C8 960 aaKnown RBP17.65■□□□□ 0.42
PRDM10-204ENST00000423662 FHAD1B1AJZ9 1412 aa17.64■□□□□ 0.41
PRDM10-204ENST00000423662 TCERG1O14776 1098 aaKnown RBP17.62■□□□□ 0.41
PRDM10-204ENST00000423662 ISY1Q9ULR0 285 aaKnown RBP17.62■□□□□ 0.41
PRDM10-204ENST00000423662 TPM4P67936 248 aa17.62■□□□□ 0.41
PRDM10-204ENST00000423662 CHMP4AQ9BY43 222 aa17.6■□□□□ 0.41
PRDM10-204ENST00000423662 HDGFL2Q7Z4V5 671 aaPredicted RBP17.6■□□□□ 0.41
PRDM10-204ENST00000423662 MYO15BQ96JP2 1530 aa17.6■□□□□ 0.41
PRDM10-204ENST00000423662 NOC3LQ8WTT2 800 aaKnown RBP17.58■□□□□ 0.41
PRDM10-204ENST00000423662 CCDC34Q96HJ3 373 aa17.58■□□□□ 0.41
PRDM10-204ENST00000423662 HSPA5P11021 654 aaKnown RBP17.57■□□□□ 0.4
PRDM10-204ENST00000423662 RCAN3Q9UKA8 241 aa17.57■□□□□ 0.4
PRDM10-204ENST00000423662 SOX12O15370 315 aa17.57■□□□□ 0.4
PRDM10-204ENST00000423662 APBB1O00213 710 aa17.57■□□□□ 0.4
PRDM10-204ENST00000423662 PMFBP1Q8TBY8 1022 aa17.57■□□□□ 0.4
PRDM10-204ENST00000423662 RALBP1Q15311 655 aa17.56■□□□□ 0.4
PRDM10-204ENST00000423662 ITPRIPQ8IWB1 547 aa17.56■□□□□ 0.4
PRDM10-204ENST00000423662 BAZ1BQ9UIG0 1483 aaKnown RBP17.55■□□□□ 0.4
PRDM10-204ENST00000423662 CSPP1Q1MSJ5 1256 aa17.54■□□□□ 0.4
PRDM10-204ENST00000423662 GOLGA6L3A6NEY3 463 aa17.54■□□□□ 0.4
PRDM10-204ENST00000423662 HDAC5Q9UQL6 1122 aa17.53■□□□□ 0.4
PRDM10-204ENST00000423662 NCBP3Q53F19 620 aaKnown RBP17.53■□□□□ 0.4
PRDM10-204ENST00000423662 GZF1Q9H116 711 aaPredicted RBP17.53■□□□□ 0.4
PRDM10-204ENST00000423662 SLKQ9H2G2 1235 aaPredicted RBP17.53■□□□□ 0.4
PRDM10-204ENST00000423662 SETD5Q9C0A6 1442 aa17.53■□□□□ 0.4
PRDM10-204ENST00000423662 AMER1Q5JTC6 1135 aaPredicted RBP17.53■□□□□ 0.4
PRDM10-204ENST00000423662 GPATCH3Q96I76 525 aa17.52■□□□□ 0.4
PRDM10-204ENST00000423662 U2AF1L5P0DN76 240 aaPredicted RBP17.51■□□□□ 0.39
PRDM10-204ENST00000423662 U2AF1Q01081 240 aaKnown RBP eCLIP17.51■□□□□ 0.39
PRDM10-204ENST00000423662 GOLGA6L1Q8N7Z2 621 aa17.51■□□□□ 0.39
PRDM10-204ENST00000423662 TNNT3P45378 269 aaPredicted RBP17.51■□□□□ 0.39
PRDM10-204ENST00000423662 USP35Q9P2H5 1018 aa17.5■□□□□ 0.39
PRDM10-204ENST00000423662 RB1CC1Q8TDY2 1594 aa17.5■□□□□ 0.39
PRDM10-204ENST00000423662 HMMRO75330 724 aa17.5■□□□□ 0.39
PRDM10-204ENST00000423662 SAFB2Q14151 953 aaKnown RBP eCLIP17.5■□□□□ 0.39
PRDM10-204ENST00000423662 STK31Q9BXU1 1019 aa17.49■□□□□ 0.39
PRDM10-204ENST00000423662 MFAP1P55081 439 aaKnown RBP17.47■□□□□ 0.39
PRDM10-204ENST00000423662 SPAG9O60271 1321 aaKnown RBP17.47■□□□□ 0.39
PRDM10-204ENST00000423662 GORABQ5T7V8 394 aa17.46■□□□□ 0.39
PRDM10-204ENST00000423662 PKD2Q13563 968 aa17.46■□□□□ 0.39
PRDM10-204ENST00000423662 HSP90B1P14625 803 aaKnown RBP17.46■□□□□ 0.38
PRDM10-204ENST00000423662 ARHGAP35Q9NRY4 1499 aa17.45■□□□□ 0.38
PRDM10-204ENST00000423662 IPO9Q96P70 1041 aaKnown RBP17.45■□□□□ 0.38
PRDM10-204ENST00000423662 PHF14O94880 888 aa17.45■□□□□ 0.38
PRDM10-204ENST00000423662 ROCK2O75116 1388 aaKnown RBP17.44■□□□□ 0.38
PRDM10-204ENST00000423662 EIF3AQ14152 1382 aaKnown RBP17.44■□□□□ 0.38
PRDM10-204ENST00000423662 A0A0U1RQG5 324 aaPredicted RBP17.44■□□□□ 0.38
PRDM10-204ENST00000423662 STK26Q9P289 416 aa17.44■□□□□ 0.38
PRDM10-204ENST00000423662 SMC4Q9NTJ3 1288 aa17.43■□□□□ 0.38
PRDM10-204ENST00000423662 TRIM6-TRIM34B2RNG4 842 aa17.43■□□□□ 0.38
PRDM10-204ENST00000423662 TMX4Q9H1E5 349 aaPredicted RBP17.42■□□□□ 0.38
PRDM10-204ENST00000423662 MLECQ14165 292 aa17.42■□□□□ 0.38
PRDM10-204ENST00000423662 ARID3AQ99856 593 aa17.42■□□□□ 0.38
PRDM10-204ENST00000423662 CSB-PGBD3P0DP91 1061 aa17.42■□□□□ 0.38
PRDM10-204ENST00000423662 KIF3AQ9Y496 699 aa17.42■□□□□ 0.38
PRDM10-204ENST00000423662 EIF4G1Q04637 1599 aaKnown RBP17.41■□□□□ 0.38
PRDM10-204ENST00000423662 CARMIL1Q5VZK9 1371 aa17.41■□□□□ 0.38
PRDM10-204ENST00000423662 TPM3P06753 285 aa17.41■□□□□ 0.38
PRDM10-204ENST00000423662 PDE3BQ13370 1112 aa17.4■□□□□ 0.38
PRDM10-204ENST00000423662 RASSF8Q8NHQ8 419 aa17.4■□□□□ 0.38
PRDM10-204ENST00000423662 ERCC6Q03468 1493 aa17.4■□□□□ 0.38
PRDM10-204ENST00000423662 TAF7LQ5H9L4 462 aa17.4■□□□□ 0.38
PRDM10-204ENST00000423662 ZNF330Q9Y3S2 320 aaPredicted RBP17.4■□□□□ 0.38
PRDM10-204ENST00000423662 ST18O60284 1047 aa17.39■□□□□ 0.37
PRDM10-204ENST00000423662 PAK3O75914 559 aaPredicted RBP17.39■□□□□ 0.37
PRDM10-204ENST00000423662 LMOD3Q0VAK6 560 aa17.38■□□□□ 0.37
PRDM10-204ENST00000423662 GGT6Q6P531 493 aa17.38■□□□□ 0.37
PRDM10-204ENST00000423662 CHMP3Q9Y3E7 222 aa17.37■□□□□ 0.37
PRDM10-204ENST00000423662 KIF16BQ96L93 1317 aa17.37■□□□□ 0.37
PRDM10-204ENST00000423662 DDX11L8A8MPP1 907 aa17.37■□□□□ 0.37
PRDM10-204ENST00000423662 CENPJQ9HC77 1338 aaPredicted RBP17.37■□□□□ 0.37
PRDM10-204ENST00000423662 CEP89Q96ST8 783 aa17.37■□□□□ 0.37
PRDM10-204ENST00000423662 TERF2IPQ9NYB0 399 aa17.36■□□□□ 0.37
PRDM10-204ENST00000423662 CHMP4CQ96CF2 233 aa17.35■□□□□ 0.37
PRDM10-204ENST00000423662 PHLDB1Q86UU1 1377 aa17.34■□□□□ 0.37
PRDM10-204ENST00000423662 MPHOSPH9Q99550 1183 aa17.34■□□□□ 0.37
PRDM10-204ENST00000423662 VPS8Q8N3P4 1428 aa17.33■□□□□ 0.37
PRDM10-204ENST00000423662 SF3A1Q15459 793 aaKnown RBP17.33■□□□□ 0.36
PRDM10-204ENST00000423662 NLRP13Q86W25 1043 aa17.33■□□□□ 0.36
PRDM10-204ENST00000423662 CUX2O14529 1486 aa17.33■□□□□ 0.36
PRDM10-204ENST00000423662 PRM3Q9NNZ6 103 aa17.32■□□□□ 0.36
PRDM10-204ENST00000423662 NUP155O75694 1391 aa17.32■□□□□ 0.36
PRDM10-204ENST00000423662 ANKRD30AQ9BXX3 1397 aa17.32■□□□□ 0.36
PRDM10-204ENST00000423662 SLC4A10Q6U841 1118 aa17.31■□□□□ 0.36
PRDM10-204ENST00000423662 TSHZ2Q9NRE2 1034 aa17.31■□□□□ 0.36
PRDM10-204ENST00000423662 NOL8Q76FK4 1167 aaKnown RBP17.31■□□□□ 0.36
PRDM10-204ENST00000423662 CREBRFQ8IUR6 639 aa17.31■□□□□ 0.36
PRDM10-204ENST00000423662 FOXD1Q16676 465 aa17.3■□□□□ 0.36
PRDM10-204ENST00000423662 FOXD4L1Q9NU39 408 aa17.3■□□□□ 0.36
PRDM10-204ENST00000423662 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.3■□□□□ 0.36
PRDM10-204ENST00000423662 CLUAP1Q96AJ1 413 aa17.29■□□□□ 0.36
PRDM10-204ENST00000423662 ATP6V1DQ9Y5K8 247 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms