RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 RAPGEF2Q9Y4G8 1499 aa13.13□□□□□ -0.31
HLA-DQA1-204ENST00000422863 MADDQ8WXG6 1647 aa13.13□□□□□ -0.31
HLA-DQA1-204ENST00000422863 LMTK3Q96Q04 1460 aa13.12□□□□□ -0.31
HLA-DQA1-204ENST00000422863 LHX8Q68G74 356 aa13.12□□□□□ -0.31
HLA-DQA1-204ENST00000422863 ABCA8O94911 1581 aa13.11□□□□□ -0.31
HLA-DQA1-204ENST00000422863 BCORL1Q5H9F3 1711 aa13.11□□□□□ -0.31
HLA-DQA1-204ENST00000422863 RAPGEF3O95398 923 aa13.11□□□□□ -0.31
HLA-DQA1-204ENST00000422863 ARID4BQ4LE39 1312 aaPredicted RBP13.11□□□□□ -0.31
HLA-DQA1-204ENST00000422863 RIMS1Q86UR5 1692 aaKnown RBP13.1□□□□□ -0.31
HLA-DQA1-204ENST00000422863 HSPA2P54652 639 aa13.1□□□□□ -0.31
HLA-DQA1-204ENST00000422863 ARAP3Q8WWN8 1544 aa13.09□□□□□ -0.31
HLA-DQA1-204ENST00000422863 PCF11O94913 1555 aaKnown RBP13.09□□□□□ -0.31
HLA-DQA1-204ENST00000422863 ATF5Q9Y2D1 282 aaPredicted RBP13.08□□□□□ -0.32
HLA-DQA1-204ENST00000422863 ILDR2Q71H61 639 aa13.07□□□□□ -0.32
HLA-DQA1-204ENST00000422863 P3H3Q8IVL6 736 aa13.07□□□□□ -0.32
HLA-DQA1-204ENST00000422863 ABCA9Q8IUA7 1624 aa13.03□□□□□ -0.32
HLA-DQA1-204ENST00000422863 CERKQ8TCT0 537 aa13.03□□□□□ -0.32
HLA-DQA1-204ENST00000422863 GOLGA3Q08378 1498 aa13.03□□□□□ -0.32
HLA-DQA1-204ENST00000422863 ATP10BO94823 1461 aa13.02□□□□□ -0.33
HLA-DQA1-204ENST00000422863 FRMPD1Q5SYB0 1578 aa13.02□□□□□ -0.33
HLA-DQA1-204ENST00000422863 DISP3Q9P2K9 1392 aa13.01□□□□□ -0.33
HLA-DQA1-204ENST00000422863 SIGLEC1Q9BZZ2 1709 aa12.99□□□□□ -0.33
HLA-DQA1-204ENST00000422863 C19orf67A6NJJ6 358 aa12.98□□□□□ -0.33
HLA-DQA1-204ENST00000422863 GABBR2O75899 941 aa12.98□□□□□ -0.33
HLA-DQA1-204ENST00000422863 MLECQ14165 292 aa12.98□□□□□ -0.33
HLA-DQA1-204ENST00000422863 RICTORQ6R327 1708 aa12.97□□□□□ -0.33
HLA-DQA1-204ENST00000422863 SOCS7O14512 581 aa12.97□□□□□ -0.33
HLA-DQA1-204ENST00000422863 PHLDB1Q86UU1 1377 aa12.96□□□□□ -0.33
HLA-DQA1-204ENST00000422863 FER1L4A9Z1Z3 1794 aa12.96□□□□□ -0.34
HLA-DQA1-204ENST00000422863 NEO1Q92859 1461 aa12.96□□□□□ -0.34
HLA-DQA1-204ENST00000422863 PRKAR2AP13861 404 aaKnown RBP12.95□□□□□ -0.34
HLA-DQA1-204ENST00000422863 FAM9AQ8IZU1 332 aaPredicted RBP12.95□□□□□ -0.34
HLA-DQA1-204ENST00000422863 RAPGEF6Q8TEU7 1601 aa12.93□□□□□ -0.34
HLA-DQA1-204ENST00000422863 PLSCR2Q9NRY7 297 aa12.93□□□□□ -0.34
HLA-DQA1-204ENST00000422863 ARHGEF40Q8TER5 1519 aa12.93□□□□□ -0.34
HLA-DQA1-204ENST00000422863 RANGAP1P46060 587 aaPredicted RBP12.91□□□□□ -0.34
HLA-DQA1-204ENST00000422863 STRCQ7RTU9 1775 aa12.91□□□□□ -0.34
HLA-DQA1-204ENST00000422863 DENND4BO75064 1496 aaPredicted RBP12.91□□□□□ -0.34
HLA-DQA1-204ENST00000422863 AKNAQ7Z591 1439 aa12.89□□□□□ -0.35
HLA-DQA1-204ENST00000422863 YEATS2Q9ULM3 1422 aa12.88□□□□□ -0.35
HLA-DQA1-204ENST00000422863 CEBPAP49715 358 aaPredicted RBP12.88□□□□□ -0.35
HLA-DQA1-204ENST00000422863 FANCAO15360 1455 aa12.88□□□□□ -0.35
HLA-DQA1-204ENST00000422863 PREX1Q8TCU6 1659 aa12.88□□□□□ -0.35
HLA-DQA1-204ENST00000422863 POGZQ7Z3K3 1410 aa12.88□□□□□ -0.35
HLA-DQA1-204ENST00000422863 PRXQ9BXM0 1461 aa12.86□□□□□ -0.35
HLA-DQA1-204ENST00000422863 SPATA31D1Q6ZQQ2 1576 aa12.86□□□□□ -0.35
HLA-DQA1-204ENST00000422863 SETD1BQ9UPS6 1966 aaKnown RBP12.85□□□□□ -0.35
HLA-DQA1-204ENST00000422863 ZFYVE16Q7Z3T8 1539 aa12.85□□□□□ -0.35
HLA-DQA1-204ENST00000422863 SAMD9Q5K651 1589 aa12.85□□□□□ -0.35
HLA-DQA1-204ENST00000422863 HECW1Q76N89 1606 aa12.84□□□□□ -0.35
HLA-DQA1-204ENST00000422863 PLEKHD1A6NEE1 506 aa12.84□□□□□ -0.35
HLA-DQA1-204ENST00000422863 FHOD3Q2V2M9 1422 aa12.84□□□□□ -0.35
HLA-DQA1-204ENST00000422863 TTC37Q6PGP7 1564 aa12.84□□□□□ -0.35
HLA-DQA1-204ENST00000422863 CFAP74Q9C0B2 1584 aa12.84□□□□□ -0.35
HLA-DQA1-204ENST00000422863 NUP153P49790 1475 aaKnown RBP12.84□□□□□ -0.35
HLA-DQA1-204ENST00000422863 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.83□□□□□ -0.35
HLA-DQA1-204ENST00000422863 EFCAB5A4FU69 1503 aa12.83□□□□□ -0.36
HLA-DQA1-204ENST00000422863 ZMYM4Q5VZL5 1548 aa12.82□□□□□ -0.36
HLA-DQA1-204ENST00000422863 SPDYE2BA6NHP3 402 aa12.81□□□□□ -0.36
HLA-DQA1-204ENST00000422863 SPDYE6P0CI01 402 aa12.81□□□□□ -0.36
HLA-DQA1-204ENST00000422863 SPDYE2Q495Y8 402 aa12.81□□□□□ -0.36
HLA-DQA1-204ENST00000422863 SPDYE1Q8NFV5 336 aaPredicted RBP12.78□□□□□ -0.36
HLA-DQA1-204ENST00000422863 CLEC11AQ9Y240 323 aa12.78□□□□□ -0.36
HLA-DQA1-204ENST00000422863 SCAPERQ9BY12 1400 aa12.78□□□□□ -0.36
HLA-DQA1-204ENST00000422863 ARHGEF12Q9NZN5 1544 aa12.78□□□□□ -0.36
HLA-DQA1-204ENST00000422863 ATP10AO60312 1499 aa12.76□□□□□ -0.37
HLA-DQA1-204ENST00000422863 MAGI2Q86UL8 1455 aa12.76□□□□□ -0.37
HLA-DQA1-204ENST00000422863 C3P01024 1663 aa12.76□□□□□ -0.37
HLA-DQA1-204ENST00000422863 MYT1LQ9UL68 1186 aa12.75□□□□□ -0.37
HLA-DQA1-204ENST00000422863 UHRF1BP1Q6BDS2 1440 aa12.74□□□□□ -0.37
HLA-DQA1-204ENST00000422863 MYO5CQ9NQX4 1742 aa12.74□□□□□ -0.37
HLA-DQA1-204ENST00000422863 CDK13Q14004 1512 aaKnown RBP12.73□□□□□ -0.37
HLA-DQA1-204ENST00000422863 FOXD4L1Q9NU39 408 aa12.73□□□□□ -0.37
HLA-DQA1-204ENST00000422863 C9orf84Q5VXU9 1444 aa12.72□□□□□ -0.37
HLA-DQA1-204ENST00000422863 POTEIP0CG38 1075 aa12.72□□□□□ -0.37
HLA-DQA1-204ENST00000422863 CSRNP3Q8WYN3 585 aa12.72□□□□□ -0.37
HLA-DQA1-204ENST00000422863 ATP1B4Q9UN42 357 aaPredicted RBP12.72□□□□□ -0.37
HLA-DQA1-204ENST00000422863 LTBP4Q8N2S1 1624 aa12.72□□□□□ -0.37
HLA-DQA1-204ENST00000422863 AFAP1Q8N556 730 aa12.7□□□□□ -0.38
HLA-DQA1-204ENST00000422863 PTPRTO14522 1441 aa12.7□□□□□ -0.38
HLA-DQA1-204ENST00000422863 PLCH2O75038 1416 aa12.7□□□□□ -0.38
HLA-DQA1-204ENST00000422863 EFCAB2Q5VUJ9 269 aa12.68□□□□□ -0.38
HLA-DQA1-204ENST00000422863 SUPT6HQ7KZ85 1726 aaKnown RBP12.67□□□□□ -0.38
HLA-DQA1-204ENST00000422863 KIF14Q15058 1648 aa12.66□□□□□ -0.38
HLA-DQA1-204ENST00000422863 UBAP1LF5GYI3 381 aa12.66□□□□□ -0.38
HLA-DQA1-204ENST00000422863 EHMT2Q96KQ7 1210 aa12.65□□□□□ -0.38
HLA-DQA1-204ENST00000422863 ESF1Q9H501 851 aaKnown RBP12.65□□□□□ -0.38
HLA-DQA1-204ENST00000422863 CDC42BPBQ9Y5S2 1711 aa12.65□□□□□ -0.38
HLA-DQA1-204ENST00000422863 DIP2CQ9Y2E4 1556 aa12.64□□□□□ -0.39
HLA-DQA1-204ENST00000422863 NCKAP5LQ9HCH0 1330 aa12.64□□□□□ -0.39
HLA-DQA1-204ENST00000422863 ABCA6Q8N139 1617 aa12.64□□□□□ -0.39
HLA-DQA1-204ENST00000422863 CHADLQ6NUI6 762 aa12.64□□□□□ -0.39
HLA-DQA1-204ENST00000422863 CAMSAP1Q5T5Y3 1602 aa12.63□□□□□ -0.39
HLA-DQA1-204ENST00000422863 ZNF335Q9H4Z2 1342 aaPredicted RBP12.62□□□□□ -0.39
HLA-DQA1-204ENST00000422863 ARHGAP5Q13017 1502 aa12.62□□□□□ -0.39
HLA-DQA1-204ENST00000422863 LRRIQ1Q96JM4 1722 aa12.62□□□□□ -0.39
HLA-DQA1-204ENST00000422863 NCOA1Q15788 1441 aa12.62□□□□□ -0.39
HLA-DQA1-204ENST00000422863 TRAPPC8Q9Y2L5 1435 aa12.62□□□□□ -0.39
HLA-DQA1-204ENST00000422863 KDM5CP41229 1560 aa12.61□□□□□ -0.39
HLA-DQA1-204ENST00000422863 IQSEC2Q5JU85 1478 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms