RNA–Protein interactions for RNA: ENST00000422441.5

ITGA9-203, Transcript of integrin subunit alpha 9, humanhuman

TSL 1 (best) BASIC

Gene ITGA9, Length 2,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA9-203ENST00000422441 TROQ12816 1431 aaPredicted RBP36.5■■■■□ 3.43
ITGA9-203ENST00000422441 PRG4Q92954 1404 aaPredicted RBP36.49■■■■□ 3.43
ITGA9-203ENST00000422441 PLB1Q6P1J6 1458 aa36.49■■■■□ 3.43
ITGA9-203ENST00000422441 NUP160Q12769 1436 aa36.49■■■■□ 3.43
ITGA9-203ENST00000422441 FBLN2P98095 1184 aa36.47■■■■□ 3.43
ITGA9-203ENST00000422441 CARMIL2Q6F5E8 1435 aa36.43■■■■□ 3.42
ITGA9-203ENST00000422441 JPH4Q96JJ6 628 aa36.43■■■■□ 3.42
ITGA9-203ENST00000422441 CCER2I3L3R5 266 aa36.42■■■■□ 3.42
ITGA9-203ENST00000422441 ANP32CO43423 234 aa36.42■■■■□ 3.42
ITGA9-203ENST00000422441 ADCY10Q96PN6 1610 aa36.37■■■■□ 3.41
ITGA9-203ENST00000422441 FOXD1Q16676 465 aa36.37■■■■□ 3.41
ITGA9-203ENST00000422441 SUPT16HQ9Y5B9 1047 aaKnown RBP36.37■■■■□ 3.41
ITGA9-203ENST00000422441 ITSN2Q9NZM3 1697 aa36.36■■■■□ 3.41
ITGA9-203ENST00000422441 CAMSAP2Q08AD1 1489 aa36.36■■■■□ 3.41
ITGA9-203ENST00000422441 GPATCH8Q9UKJ3 1502 aaKnown RBP36.36■■■■□ 3.41
ITGA9-203ENST00000422441 CFDP1Q9UEE9 299 aaPredicted RBP36.34■■■■□ 3.41
ITGA9-203ENST00000422441 ANKRD30BQ9BXX2 1392 aa36.34■■■■□ 3.41
ITGA9-203ENST00000422441 KIF14Q15058 1648 aa36.33■■■■□ 3.41
ITGA9-203ENST00000422441 L3MBTL2Q969R5 705 aa36.31■■■■□ 3.4
ITGA9-203ENST00000422441 HSPA5P11021 654 aaKnown RBP36.28■■■■□ 3.4
ITGA9-203ENST00000422441 RPRD2Q5VT52 1461 aaKnown RBP36.27■■■■□ 3.4
ITGA9-203ENST00000422441 ABCA8O94911 1581 aa36.25■■■■□ 3.39
ITGA9-203ENST00000422441 NCOA1Q15788 1441 aa36.24■■■■□ 3.39
ITGA9-203ENST00000422441 ADGBQ8N7X0 1667 aa36.23■■■■□ 3.39
ITGA9-203ENST00000422441 SLC4A1APQ9BWU0 796 aaKnown RBP36.23■■■■□ 3.39
ITGA9-203ENST00000422441 EIF4G2P78344 907 aaKnown RBP eCLIP36.2■■■■□ 3.39
ITGA9-203ENST00000422441 ADGRL2O95490 1459 aa36.19■■■■□ 3.38
ITGA9-203ENST00000422441 WASHC2AQ641Q2 1341 aa36.19■■■■□ 3.38
ITGA9-203ENST00000422441 ZNF777Q9ULD5 760 aaPredicted RBP36.19■■■■□ 3.38
ITGA9-203ENST00000422441 CROCC2H7BZ55 1655 aa36.18■■■■□ 3.38
ITGA9-203ENST00000422441 PZPP20742 1482 aa36.17■■■■□ 3.38
ITGA9-203ENST00000422441 TEX14Q8IWB6 1497 aa36.17■■■■□ 3.38
ITGA9-203ENST00000422441 ATP10BO94823 1461 aa36.15■■■■□ 3.38
ITGA9-203ENST00000422441 PLEKHD1A6NEE1 506 aa36.15■■■■□ 3.38
ITGA9-203ENST00000422441 ABCC10Q5T3U5 1492 aa36.12■■■■□ 3.37
ITGA9-203ENST00000422441 CDC42BPAQ5VT25 1732 aa36.11■■■■□ 3.37
ITGA9-203ENST00000422441 NBPF8Q3BBV2 869 aa36.1■■■■□ 3.37
ITGA9-203ENST00000422441 ANKRD30AQ9BXX3 1397 aa36.08■■■■□ 3.37
ITGA9-203ENST00000422441 KIAA1107Q9UPP5 1409 aa36■■■■□ 3.35
ITGA9-203ENST00000422441 C11orf95C9JLR9 678 aaPredicted RBP35.99■■■■□ 3.35
ITGA9-203ENST00000422441 ANKRD50Q9ULJ7 1429 aa35.98■■■■□ 3.35
ITGA9-203ENST00000422441 SHANK2Q9UPX8 1470 aa35.98■■■■□ 3.35
ITGA9-203ENST00000422441 CNTLNQ9NXG0 1405 aa35.97■■■■□ 3.35
ITGA9-203ENST00000422441 PTPRGP23470 1445 aa35.96■■■■□ 3.35
ITGA9-203ENST00000422441 CCDC7Q96M83 1385 aa35.96■■■■□ 3.35
ITGA9-203ENST00000422441 SPATA31E1Q6ZUB1 1445 aa35.94■■■■□ 3.34
ITGA9-203ENST00000422441 C9orf84Q5VXU9 1444 aa35.94■■■■□ 3.34
ITGA9-203ENST00000422441 PKD2Q13563 968 aa35.92■■■■□ 3.34
ITGA9-203ENST00000422441 MBD5Q9P267 1494 aa35.89■■■■□ 3.34
ITGA9-203ENST00000422441 FKBP8Q14318 412 aa35.85■■■■□ 3.33
ITGA9-203ENST00000422441 TSPY4P0CV99 314 aa35.85■■■■□ 3.33
ITGA9-203ENST00000422441 TSPY10P0CW01 314 aa35.85■■■■□ 3.33
ITGA9-203ENST00000422441 ARHGEF5Q12774 1597 aa35.84■■■■□ 3.33
ITGA9-203ENST00000422441 CHD1O14646 1710 aa35.84■■■■□ 3.33
ITGA9-203ENST00000422441 POLR1AO95602 1720 aaPredicted RBP35.82■■■■□ 3.32
ITGA9-203ENST00000422441 HNRNPMP52272 730 aaKnown RBP eCLIP35.81■■■■□ 3.32
ITGA9-203ENST00000422441 NUP155O75694 1391 aa35.81■■■■□ 3.32
ITGA9-203ENST00000422441 KDM5DQ9BY66 1539 aa35.79■■■■□ 3.32
ITGA9-203ENST00000422441 KIF7Q2M1P5 1343 aa35.79■■■■□ 3.32
ITGA9-203ENST00000422441 CDC42BPBQ9Y5S2 1711 aa35.76■■■■□ 3.31
ITGA9-203ENST00000422441 KIF15Q9NS87 1388 aa35.75■■■■□ 3.31
ITGA9-203ENST00000422441 SAMD9LQ8IVG5 1584 aa35.75■■■■□ 3.31
ITGA9-203ENST00000422441 PREX2Q70Z35 1606 aa35.75■■■■□ 3.31
ITGA9-203ENST00000422441 PRKRIP1Q9H875 184 aaPredicted RBP35.74■■■■□ 3.31
ITGA9-203ENST00000422441 SHROOM2Q13796 1616 aa35.74■■■■□ 3.31
ITGA9-203ENST00000422441 HNRNPUQ00839 825 aaKnown RBP eCLIP35.73■■■■□ 3.31
ITGA9-203ENST00000422441 BCANQ96GW7 911 aa35.72■■■■□ 3.31
ITGA9-203ENST00000422441 NEFLP07196 543 aa35.71■■■■□ 3.31
ITGA9-203ENST00000422441 CCDC141Q6ZP82 1450 aa35.7■■■■□ 3.31
ITGA9-203ENST00000422441 CCDC184Q52MB2 194 aa35.69■■■■□ 3.3
ITGA9-203ENST00000422441 UHRF1BP1Q6BDS2 1440 aa35.67■■■■□ 3.3
ITGA9-203ENST00000422441 RSPH4AQ5TD94 716 aa35.66■■■■□ 3.3
ITGA9-203ENST00000422441 USP47Q96K76 1375 aa35.66■■■■□ 3.3
ITGA9-203ENST00000422441 ZNF326Q5BKZ1 582 aaKnown RBP35.65■■■■□ 3.3
ITGA9-203ENST00000422441 ARHGEF12Q9NZN5 1544 aa35.61■■■■□ 3.29
ITGA9-203ENST00000422441 TSHZ2Q9NRE2 1034 aa35.61■■■■□ 3.29
ITGA9-203ENST00000422441 KDM5CP41229 1560 aa35.61■■■■□ 3.29
ITGA9-203ENST00000422441 BCORL1Q5H9F3 1711 aa35.6■■■■□ 3.29
ITGA9-203ENST00000422441 TTC37Q6PGP7 1564 aa35.59■■■■□ 3.29
ITGA9-203ENST00000422441 ERCC6L2Q5T890 1561 aa35.58■■■■□ 3.29
ITGA9-203ENST00000422441 RALGAPBQ86X10 1494 aa35.58■■■■□ 3.29
ITGA9-203ENST00000422441 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.57■■■■□ 3.29
ITGA9-203ENST00000422441 ABCC2Q92887 1545 aa35.55■■■■□ 3.28
ITGA9-203ENST00000422441 SYCP2Q9BX26 1530 aa35.55■■■■□ 3.28
ITGA9-203ENST00000422441 ARHGAP5Q13017 1502 aa35.54■■■■□ 3.28
ITGA9-203ENST00000422441 MRS2Q9HD23 443 aa35.53■■■■□ 3.28
ITGA9-203ENST00000422441 FAM135AQ9P2D6 1515 aa35.53■■■■□ 3.28
ITGA9-203ENST00000422441 MAST1Q9Y2H9 1570 aa35.53■■■■□ 3.28
ITGA9-203ENST00000422441 ARID4BQ4LE39 1312 aaPredicted RBP35.51■■■■□ 3.28
ITGA9-203ENST00000422441 DHX29Q7Z478 1369 aaKnown RBP35.49■■■■□ 3.27
ITGA9-203ENST00000422441 FAM9BQ8IZU0 186 aa35.47■■■■□ 3.27
ITGA9-203ENST00000422441 MYO5CQ9NQX4 1742 aa35.45■■■■□ 3.27
ITGA9-203ENST00000422441 CARD11Q9BXL7 1154 aa35.45■■■■□ 3.27
ITGA9-203ENST00000422441 KDM2AQ9Y2K7 1162 aa35.44■■■■□ 3.26
ITGA9-203ENST00000422441 DCAF11Q8TEB1 546 aa35.43■■■■□ 3.26
ITGA9-203ENST00000422441 UNC13BO14795 1591 aa35.42■■■■□ 3.26
ITGA9-203ENST00000422441 PLEKHH2Q8IVE3 1493 aa35.42■■■■□ 3.26
ITGA9-203ENST00000422441 POLR3GLQ9BT43 218 aa35.39■■■■□ 3.26
ITGA9-203ENST00000422441 PLXNC1O60486 1568 aa35.39■■■■□ 3.26
ITGA9-203ENST00000422441 ZBED9Q6R2W3 1325 aa35.35■■■■□ 3.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms