RNA–Protein interactions for RNA: ENST00000422242.1

RAB5A-203, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB5A, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-203ENST00000422242 LARP6Q9BRS8 491 aaKnown RBP18.44■□□□□ 0.54
RAB5A-203ENST00000422242 FXR2P51116 673 aaKnown RBP eCLIP18.41■□□□□ 0.54
RAB5A-203ENST00000422242 PRDM2Q13029 1718 aa18.41■□□□□ 0.54
RAB5A-203ENST00000422242 PDE4AP27815 886 aa18.39■□□□□ 0.53
RAB5A-203ENST00000422242 ARXQ96QS3 562 aa18.38■□□□□ 0.53
RAB5A-203ENST00000422242 MS4A4AQ96JQ5 239 aa18.37■□□□□ 0.53
RAB5A-203ENST00000422242 LAMC3Q9Y6N6 1575 aa18.37■□□□□ 0.53
RAB5A-203ENST00000422242 CFTRP13569 1480 aa18.36■□□□□ 0.53
RAB5A-203ENST00000422242 CADPSQ9ULU8 1353 aa18.34■□□□□ 0.53
RAB5A-203ENST00000422242 MFSD10Q14728 455 aa18.34■□□□□ 0.53
RAB5A-203ENST00000422242 SMYD5Q6GMV2 418 aa18.34■□□□□ 0.53
RAB5A-203ENST00000422242 ZMYND10O75800 440 aa18.32■□□□□ 0.52
RAB5A-203ENST00000422242 CRISPLD2Q9H0B8 497 aa18.32■□□□□ 0.52
RAB5A-203ENST00000422242 DDX27Q96GQ7 796 aaKnown RBP18.31■□□□□ 0.52
RAB5A-203ENST00000422242 ARIH1Q9Y4X5 557 aaPredicted RBP18.27■□□□□ 0.52
RAB5A-203ENST00000422242 ZRANB1Q9UGI0 708 aa18.24■□□□□ 0.51
RAB5A-203ENST00000422242 NESP48681 1621 aa18.23■□□□□ 0.51
RAB5A-203ENST00000422242 GOLGA2Q08379 1002 aa18.23■□□□□ 0.51
RAB5A-203ENST00000422242 PHF12Q96QT6 1004 aa18.23■□□□□ 0.51
RAB5A-203ENST00000422242 CAMK2BQ13554 666 aa18.22■□□□□ 0.51
RAB5A-203ENST00000422242 BARGINQ6ZT62 677 aa18.2■□□□□ 0.5
RAB5A-203ENST00000422242 PIP4P2Q8N4L2 257 aa18.19■□□□□ 0.5
RAB5A-203ENST00000422242 TMEM106CQ9BVX2 250 aa18.18■□□□□ 0.5
RAB5A-203ENST00000422242 PDS5BQ9NTI5 1447 aa18.17■□□□□ 0.5
RAB5A-203ENST00000422242 CD44P16070 742 aaKnown RBP18.15■□□□□ 0.5
RAB5A-203ENST00000422242 FANCD2Q9BXW9 1451 aa18.14■□□□□ 0.49
RAB5A-203ENST00000422242 KIF21AQ7Z4S6 1674 aa18.13■□□□□ 0.49
RAB5A-203ENST00000422242 RBM26Q5T8P6 1007 aaKnown RBP18.13■□□□□ 0.49
RAB5A-203ENST00000422242 MLLT3P42568 568 aaPredicted RBP18.12■□□□□ 0.49
RAB5A-203ENST00000422242 CHRDL2Q6WN34 429 aa18.12■□□□□ 0.49
RAB5A-203ENST00000422242 MKRN3Q13064 507 aaKnown RBP18.11■□□□□ 0.49
RAB5A-203ENST00000422242 TRPC6Q9Y210 931 aa18.09■□□□□ 0.49
RAB5A-203ENST00000422242 GPIHBP1Q8IV16 184 aa18.08■□□□□ 0.49
RAB5A-203ENST00000422242 CEP164Q9UPV0 1460 aa18.08■□□□□ 0.49
RAB5A-203ENST00000422242 HOMEZQ8IX15 550 aa18.07■□□□□ 0.48
RAB5A-203ENST00000422242 AK7Q96M32 723 aa18.07■□□□□ 0.48
RAB5A-203ENST00000422242 PPP1R15BQ5SWA1 713 aa18.06■□□□□ 0.48
RAB5A-203ENST00000422242 KRI1Q8N9T8 703 aaKnown RBP18.04■□□□□ 0.48
RAB5A-203ENST00000422242 GPBP1L1Q9HC44 474 aaPredicted RBP18.04■□□□□ 0.48
RAB5A-203ENST00000422242 ABCC8Q09428 1581 aa18.03■□□□□ 0.48
RAB5A-203ENST00000422242 MS4A3Q96HJ5 214 aa18.02■□□□□ 0.48
RAB5A-203ENST00000422242 GPHNQ9NQX3 736 aaPredicted RBP18.01■□□□□ 0.47
RAB5A-203ENST00000422242 WRNQ14191 1432 aaPredicted RBP eCLIP18■□□□□ 0.47
RAB5A-203ENST00000422242 BIVM-ERCC5R4GMW8 1640 aa18■□□□□ 0.47
RAB5A-203ENST00000422242 ERCC6Q03468 1493 aa18■□□□□ 0.47
RAB5A-203ENST00000422242 TOP2BQ02880 1626 aa17.97■□□□□ 0.47
RAB5A-203ENST00000422242 DPYSL4O14531 572 aa17.97■□□□□ 0.47
RAB5A-203ENST00000422242 DNMBPQ6XZF7 1577 aa17.96■□□□□ 0.47
RAB5A-203ENST00000422242 MRC2Q9UBG0 1479 aa17.96■□□□□ 0.47
RAB5A-203ENST00000422242 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.96■□□□□ 0.473e-6■■■□□ 15.8
RAB5A-203ENST00000422242 SYNJ1O43426 1573 aa17.96■□□□□ 0.46
RAB5A-203ENST00000422242 THOC2Q8NI27 1593 aaKnown RBP17.96■□□□□ 0.46
RAB5A-203ENST00000422242 EMILIN3Q9NT22 766 aa17.95■□□□□ 0.46
RAB5A-203ENST00000422242 CUX1P39880 1505 aa17.95■□□□□ 0.46
RAB5A-203ENST00000422242 IL27Q8NEV9 243 aa17.94■□□□□ 0.46
RAB5A-203ENST00000422242 WDR62O43379 1518 aa17.92■□□□□ 0.46
RAB5A-203ENST00000422242 URB2Q14146 1524 aaKnown RBP17.92■□□□□ 0.46
RAB5A-203ENST00000422242 ILDR1Q86SU0 546 aaPredicted RBP17.92■□□□□ 0.46
RAB5A-203ENST00000422242 TOPBP1Q92547 1522 aa17.92■□□□□ 0.46
RAB5A-203ENST00000422242 KDM4CQ9H3R0 1056 aa17.91■□□□□ 0.46
RAB5A-203ENST00000422242 SPDYE16A6NNV3 312 aaPredicted RBP17.89■□□□□ 0.45
RAB5A-203ENST00000422242 TRIM66O15016 1216 aa17.89■□□□□ 0.45
RAB5A-203ENST00000422242 DSG2Q14126 1118 aa17.89■□□□□ 0.45
RAB5A-203ENST00000422242 TTLL13PA6NNM8 815 aa17.88■□□□□ 0.45
RAB5A-203ENST00000422242 PDIA6Q15084 440 aa17.88■□□□□ 0.45
RAB5A-203ENST00000422242 DAXXQ9UER7 740 aaPredicted RBP17.88■□□□□ 0.45
RAB5A-203ENST00000422242 TIE1P35590 1138 aa17.87■□□□□ 0.45
RAB5A-203ENST00000422242 PDE4DQ08499 809 aa17.86■□□□□ 0.45
RAB5A-203ENST00000422242 DPY19L2Q6NUT2 758 aa17.83■□□□□ 0.45
RAB5A-203ENST00000422242 FGD5Q6ZNL6 1462 aa17.8■□□□□ 0.44
RAB5A-203ENST00000422242 BMP2KQ9NSY1 1161 aaPredicted RBP17.8■□□□□ 0.44
RAB5A-203ENST00000422242 MICALL2Q8IY33 904 aa17.79■□□□□ 0.44
RAB5A-203ENST00000422242 TMC2Q8TDI7 906 aa17.79■□□□□ 0.44
RAB5A-203ENST00000422242 POLA1P09884 1462 aaPredicted RBP17.78■□□□□ 0.44
RAB5A-203ENST00000422242 GPR37O15354 613 aa17.77■□□□□ 0.44
RAB5A-203ENST00000422242 FOXK1P85037 733 aa17.77■□□□□ 0.44
RAB5A-203ENST00000422242 TRIM35Q9UPQ4 493 aa17.77■□□□□ 0.44
RAB5A-203ENST00000422242 C19orf67A6NJJ6 358 aa17.74■□□□□ 0.43
RAB5A-203ENST00000422242 WDR97A6NE52 1622 aa17.74■□□□□ 0.43
RAB5A-203ENST00000422242 TARBP1Q13395 1621 aaKnown RBP17.72■□□□□ 0.43
RAB5A-203ENST00000422242 CUX2O14529 1486 aa17.71■□□□□ 0.43
RAB5A-203ENST00000422242 PLPP6Q8IY26 295 aa17.71■□□□□ 0.43
RAB5A-203ENST00000422242 GRXCR2A6NFK2 248 aa17.7■□□□□ 0.42
RAB5A-203ENST00000422242 IFT140Q96RY7 1462 aa17.7■□□□□ 0.42
RAB5A-203ENST00000422242 SOGA1O94964 1423 aa17.69■□□□□ 0.42
RAB5A-203ENST00000422242 ABCA10Q8WWZ4 1543 aa17.69■□□□□ 0.42
RAB5A-203ENST00000422242 FAM117AQ9C073 453 aa17.68■□□□□ 0.42
RAB5A-203ENST00000422242 NUTM2FA1L443 756 aa17.67■□□□□ 0.42
RAB5A-203ENST00000422242 ZMYND15Q9H091 742 aa17.67■□□□□ 0.42
RAB5A-203ENST00000422242 PDCD7Q8N8D1 485 aaKnown RBP17.66■□□□□ 0.42
RAB5A-203ENST00000422242 MINK1Q8N4C8 1332 aaPredicted RBP17.66■□□□□ 0.42
RAB5A-203ENST00000422242 RAD54L2Q9Y4B4 1467 aa17.66■□□□□ 0.42
RAB5A-203ENST00000422242 C2orf72A6NCS6 295 aa17.64■□□□□ 0.42
RAB5A-203ENST00000422242 MAP3K9P80192 1104 aa17.64■□□□□ 0.41
RAB5A-203ENST00000422242 CCDC102AQ96A19 550 aa17.63■□□□□ 0.41
RAB5A-203ENST00000422242 EEA1Q15075 1411 aa17.62■□□□□ 0.41
RAB5A-203ENST00000422242 GALR2O43603 387 aaPredicted RBP17.62■□□□□ 0.41
RAB5A-203ENST00000422242 MAP2K5Q13163 448 aa17.62■□□□□ 0.41
RAB5A-203ENST00000422242 ABCA5Q8WWZ7 1642 aa17.61■□□□□ 0.41
RAB5A-203ENST00000422242 ZNF316A6NFI3 1004 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms