RNA–Protein interactions for RNA: ENST00000421339.3

TBC1D1-207, Transcript of TBC1 domain family member 1, humanhuman

TSL 5

Gene TBC1D1, Length 679 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-207ENST00000421339 UBTFP17480 764 aaKnown RBP13.66□□□□□ -0.22
TBC1D1-207ENST00000421339 SPATA31D1Q6ZQQ2 1576 aa13.66□□□□□ -0.22
TBC1D1-207ENST00000421339 YEATS2Q9ULM3 1422 aa13.65□□□□□ -0.22
TBC1D1-207ENST00000421339 EFCAB5A4FU69 1503 aa13.65□□□□□ -0.22
TBC1D1-207ENST00000421339 ZFYVE16Q7Z3T8 1539 aa13.65□□□□□ -0.22
TBC1D1-207ENST00000421339 P3H3Q8IVL6 736 aa13.65□□□□□ -0.22
TBC1D1-207ENST00000421339 NUP153P49790 1475 aaKnown RBP13.65□□□□□ -0.22
TBC1D1-207ENST00000421339 HECW1Q76N89 1606 aa13.64□□□□□ -0.23
TBC1D1-207ENST00000421339 SETD1BQ9UPS6 1966 aaKnown RBP13.63□□□□□ -0.23
TBC1D1-207ENST00000421339 MAGI2Q86UL8 1455 aa13.63□□□□□ -0.23
TBC1D1-207ENST00000421339 PLPPR3Q6T4P5 718 aa13.63□□□□□ -0.23
TBC1D1-207ENST00000421339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.63□□□□□ -0.23
TBC1D1-207ENST00000421339 ARHGEF12Q9NZN5 1544 aa13.63□□□□□ -0.23
TBC1D1-207ENST00000421339 CLIP1P30622 1438 aa13.61□□□□□ -0.23
TBC1D1-207ENST00000421339 MLECQ14165 292 aa13.58□□□□□ -0.24
TBC1D1-207ENST00000421339 VPS8Q8N3P4 1428 aa13.57□□□□□ -0.24
TBC1D1-207ENST00000421339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.57□□□□□ -0.24
TBC1D1-207ENST00000421339 HNRNPUL2Q1KMD3 747 aaKnown RBP13.57□□□□□ -0.24
TBC1D1-207ENST00000421339 LTBP4Q8N2S1 1624 aa13.57□□□□□ -0.24
TBC1D1-207ENST00000421339 DMRT2Q9Y5R5 561 aa13.56□□□□□ -0.24
TBC1D1-207ENST00000421339 ATP10AO60312 1499 aa13.55□□□□□ -0.24
TBC1D1-207ENST00000421339 PLEKHD1A6NEE1 506 aa13.54□□□□□ -0.24
TBC1D1-207ENST00000421339 PTPRTO14522 1441 aa13.54□□□□□ -0.24
TBC1D1-207ENST00000421339 CEBPAP49715 358 aaPredicted RBP13.53□□□□□ -0.24
TBC1D1-207ENST00000421339 C9orf84Q5VXU9 1444 aa13.53□□□□□ -0.24
TBC1D1-207ENST00000421339 IQSEC2Q5JU85 1478 aa13.53□□□□□ -0.24
TBC1D1-207ENST00000421339 C3P01024 1663 aa13.53□□□□□ -0.24
TBC1D1-207ENST00000421339 SCAPERQ9BY12 1400 aa13.52□□□□□ -0.25
TBC1D1-207ENST00000421339 PLCH2O75038 1416 aa13.51□□□□□ -0.25
TBC1D1-207ENST00000421339 UHRF1BP1Q6BDS2 1440 aa13.51□□□□□ -0.25
TBC1D1-207ENST00000421339 MYO5CQ9NQX4 1742 aa13.5□□□□□ -0.25
TBC1D1-207ENST00000421339 KDM5CP41229 1560 aa13.48□□□□□ -0.25
TBC1D1-207ENST00000421339 REREQ9P2R6 1566 aa13.48□□□□□ -0.25
TBC1D1-207ENST00000421339 CDK13Q14004 1512 aaKnown RBP13.46□□□□□ -0.25
TBC1D1-207ENST00000421339 DIP2CQ9Y2E4 1556 aa13.45□□□□□ -0.26
TBC1D1-207ENST00000421339 ABCA6Q8N139 1617 aa13.43□□□□□ -0.26
TBC1D1-207ENST00000421339 NCOA1Q15788 1441 aa13.43□□□□□ -0.26
TBC1D1-207ENST00000421339 ZNF518AQ6AHZ1 1483 aa13.42□□□□□ -0.26
TBC1D1-207ENST00000421339 KIF14Q15058 1648 aa13.42□□□□□ -0.26
TBC1D1-207ENST00000421339 AGLP35573 1532 aa13.41□□□□□ -0.26
TBC1D1-207ENST00000421339 EFCAB2Q5VUJ9 269 aa13.41□□□□□ -0.26
TBC1D1-207ENST00000421339 CCER1Q8TC90 406 aaPredicted RBP13.41□□□□□ -0.26
TBC1D1-207ENST00000421339 CDC42BPBQ9Y5S2 1711 aa13.41□□□□□ -0.26
TBC1D1-207ENST00000421339 TRAPPC8Q9Y2L5 1435 aa13.4□□□□□ -0.26
TBC1D1-207ENST00000421339 CAMSAP1Q5T5Y3 1602 aa13.39□□□□□ -0.27
TBC1D1-207ENST00000421339 MLH3Q9UHC1 1453 aa13.38□□□□□ -0.27
TBC1D1-207ENST00000421339 AFAP1Q8N556 730 aa13.38□□□□□ -0.27
TBC1D1-207ENST00000421339 MROH2AA6NES4 1674 aa13.37□□□□□ -0.27
TBC1D1-207ENST00000421339 RANGAP1P46060 587 aaPredicted RBP13.37□□□□□ -0.27
TBC1D1-207ENST00000421339 ARHGAP35Q9NRY4 1499 aa13.36□□□□□ -0.27
TBC1D1-207ENST00000421339 LRRIQ1Q96JM4 1722 aa13.36□□□□□ -0.27
TBC1D1-207ENST00000421339 KIDINS220Q9ULH0 1771 aa13.36□□□□□ -0.27
TBC1D1-207ENST00000421339 APLP2Q06481 763 aa13.36□□□□□ -0.27
TBC1D1-207ENST00000421339 SUPT6HQ7KZ85 1726 aaKnown RBP13.35□□□□□ -0.27
TBC1D1-207ENST00000421339 ZNF142P52746 1687 aaPredicted RBP13.34□□□□□ -0.27
TBC1D1-207ENST00000421339 ITSN2Q9NZM3 1697 aa13.34□□□□□ -0.27
TBC1D1-207ENST00000421339 ARHGAP5Q13017 1502 aa13.34□□□□□ -0.27
TBC1D1-207ENST00000421339 NPATQ14207 1427 aa13.33□□□□□ -0.28
TBC1D1-207ENST00000421339 CNTLNQ9NXG0 1405 aa13.33□□□□□ -0.28
TBC1D1-207ENST00000421339 MED1Q15648 1581 aaPredicted RBP13.32□□□□□ -0.28
TBC1D1-207ENST00000421339 UBAP1LF5GYI3 381 aa13.32□□□□□ -0.28
TBC1D1-207ENST00000421339 ABCC1P33527 1531 aa13.32□□□□□ -0.28
TBC1D1-207ENST00000421339 ZNF335Q9H4Z2 1342 aaPredicted RBP13.32□□□□□ -0.28
TBC1D1-207ENST00000421339 PREX2Q70Z35 1606 aa13.31□□□□□ -0.28
TBC1D1-207ENST00000421339 TROQ12816 1431 aaPredicted RBP13.3□□□□□ -0.28
TBC1D1-207ENST00000421339 MYO3AQ8NEV4 1616 aa13.3□□□□□ -0.28
TBC1D1-207ENST00000421339 PLA2R1Q13018 1463 aa13.29□□□□□ -0.28
TBC1D1-207ENST00000421339 TCOF1Q13428 1488 aaKnown RBP13.29□□□□□ -0.28
TBC1D1-207ENST00000421339 NCKAP5LQ9HCH0 1330 aa13.29□□□□□ -0.28
TBC1D1-207ENST00000421339 MAP3K1Q13233 1512 aa13.29□□□□□ -0.28
TBC1D1-207ENST00000421339 CDC42BPAQ5VT25 1732 aa13.28□□□□□ -0.28
TBC1D1-207ENST00000421339 ESF1Q9H501 851 aaKnown RBP13.28□□□□□ -0.28
TBC1D1-207ENST00000421339 CLTCQ00610 1675 aaKnown RBP13.28□□□□□ -0.28
TBC1D1-207ENST00000421339 MYT1LQ9UL68 1186 aa13.27□□□□□ -0.29
TBC1D1-207ENST00000421339 ZMYM3Q14202 1370 aa13.27□□□□□ -0.29
TBC1D1-207ENST00000421339 FMN1Q68DA7 1419 aa13.27□□□□□ -0.29
TBC1D1-207ENST00000421339 CEP170BQ9Y4F5 1589 aaPredicted RBP13.27□□□□□ -0.29
TBC1D1-207ENST00000421339 CDK11AQ9UQ88 783 aaPredicted RBP13.26□□□□□ -0.29
TBC1D1-207ENST00000421339 RRBP1Q9P2E9 1410 aaKnown RBP13.25□□□□□ -0.29
TBC1D1-207ENST00000421339 PKD2Q13563 968 aa13.25□□□□□ -0.29
TBC1D1-207ENST00000421339 SAMD9LQ8IVG5 1584 aa13.24□□□□□ -0.29
TBC1D1-207ENST00000421339 POLR1AO95602 1720 aaPredicted RBP13.23□□□□□ -0.29
TBC1D1-207ENST00000421339 HSPA1LP34931 641 aa13.23□□□□□ -0.29
TBC1D1-207ENST00000421339 PLXNC1O60486 1568 aa13.23□□□□□ -0.29
TBC1D1-207ENST00000421339 TIAM1Q13009 1591 aa13.23□□□□□ -0.29
TBC1D1-207ENST00000421339 PTPRKQ15262 1439 aa13.22□□□□□ -0.29
TBC1D1-207ENST00000421339 KANK4Q5T7N3 995 aaPredicted RBP13.22□□□□□ -0.29
TBC1D1-207ENST00000421339 ALKQ9UM73 1620 aa13.21□□□□□ -0.29
TBC1D1-207ENST00000421339 ATP1B4Q9UN42 357 aaPredicted RBP13.21□□□□□ -0.29
TBC1D1-207ENST00000421339 DNMT1P26358 1616 aaKnown RBP13.21□□□□□ -0.3
TBC1D1-207ENST00000421339 NEURL4Q96JN8 1562 aa13.2□□□□□ -0.3
TBC1D1-207ENST00000421339 CPS1P31327 1500 aa13.18□□□□□ -0.3
TBC1D1-207ENST00000421339 PPP6R1Q9UPN7 881 aa13.18□□□□□ -0.3
TBC1D1-207ENST00000421339 INO80Q9ULG1 1556 aaPredicted RBP13.18□□□□□ -0.3
TBC1D1-207ENST00000421339 A2ML1A8K2U0 1454 aa13.16□□□□□ -0.3
TBC1D1-207ENST00000421339 ATP7AQ04656 1500 aa13.16□□□□□ -0.3
TBC1D1-207ENST00000421339 SYCP2Q9BX26 1530 aa13.16□□□□□ -0.3
TBC1D1-207ENST00000421339 SHANK2Q9UPX8 1470 aa13.16□□□□□ -0.3
TBC1D1-207ENST00000421339 TOM1O60784 492 aa13.15□□□□□ -0.3
TBC1D1-207ENST00000421339 VWDEQ8N2E2 1590 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms