RNA–Protein interactions for RNA: ENST00000421258.1

TFRC-204, Transcript of transferrin receptor, humanhuman

TSL 3

Gene TFRC, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-204ENST00000421258 ARHGEF12Q9NZN5 1544 aa21.92■■□□□ 1.1
TFRC-204ENST00000421258 CEBPAP49715 358 aaPredicted RBP21.92■■□□□ 1.1
TFRC-204ENST00000421258 MAGI2Q86UL8 1455 aa21.91■■□□□ 1.1
TFRC-204ENST00000421258 CSRNP3Q8WYN3 585 aa21.91■■□□□ 1.1
TFRC-204ENST00000421258 PREX1Q8TCU6 1659 aa21.91■■□□□ 1.1
TFRC-204ENST00000421258 SCAPERQ9BY12 1400 aa21.9■■□□□ 1.1
TFRC-204ENST00000421258 STRCQ7RTU9 1775 aa21.89■■□□□ 1.09
TFRC-204ENST00000421258 SOCS7O14512 581 aa21.86■■□□□ 1.09
TFRC-204ENST00000421258 ATP10AO60312 1499 aa21.84■■□□□ 1.09
TFRC-204ENST00000421258 C9orf84Q5VXU9 1444 aa21.84■■□□□ 1.09
TFRC-204ENST00000421258 PLCH2O75038 1416 aa21.83■■□□□ 1.09
TFRC-204ENST00000421258 SPATA31D1Q6ZQQ2 1576 aa21.82■■□□□ 1.08
TFRC-204ENST00000421258 UHRF1BP1Q6BDS2 1440 aa21.78■■□□□ 1.08
TFRC-204ENST00000421258 KIF14Q15058 1648 aa21.77■■□□□ 1.07
TFRC-204ENST00000421258 MYO5CQ9NQX4 1742 aa21.75■■□□□ 1.07
TFRC-204ENST00000421258 DIP2CQ9Y2E4 1556 aa21.74■■□□□ 1.07
TFRC-204ENST00000421258 AFAP1Q8N556 730 aa21.72■■□□□ 1.07
TFRC-204ENST00000421258 KDM5CP41229 1560 aa21.72■■□□□ 1.07
TFRC-204ENST00000421258 LTBP4Q8N2S1 1624 aa21.71■■□□□ 1.07
TFRC-204ENST00000421258 EFCAB2Q5VUJ9 269 aa21.71■■□□□ 1.07
TFRC-204ENST00000421258 DMRT2Q9Y5R5 561 aa21.71■■□□□ 1.07
TFRC-204ENST00000421258 C3P01024 1663 aa21.71■■□□□ 1.07
TFRC-204ENST00000421258 ZNF518AQ6AHZ1 1483 aa21.71■■□□□ 1.07
TFRC-204ENST00000421258 ABCA6Q8N139 1617 aa21.7■■□□□ 1.06
TFRC-204ENST00000421258 ATP1B4Q9UN42 357 aaPredicted RBP21.7■■□□□ 1.06
TFRC-204ENST00000421258 ARHGAP5Q13017 1502 aa21.69■■□□□ 1.06
TFRC-204ENST00000421258 PTPRTO14522 1441 aa21.68■■□□□ 1.06
TFRC-204ENST00000421258 EHMT2Q96KQ7 1210 aa21.66■■□□□ 1.06
TFRC-204ENST00000421258 EEA1Q15075 1411 aa21.65■■□□□ 1.06
TFRC-204ENST00000421258 MYT1LQ9UL68 1186 aa21.65■■□□□ 1.06
TFRC-204ENST00000421258 REREQ9P2R6 1566 aa21.63■■□□□ 1.05
TFRC-204ENST00000421258 SETD1BQ9UPS6 1966 aaKnown RBP21.63■■□□□ 1.05
TFRC-204ENST00000421258 NCOA1Q15788 1441 aa21.62■■□□□ 1.05
TFRC-204ENST00000421258 TROQ12816 1431 aaPredicted RBP21.6■■□□□ 1.05
TFRC-204ENST00000421258 TRAPPC8Q9Y2L5 1435 aa21.6■■□□□ 1.05
TFRC-204ENST00000421258 LRRIQ1Q96JM4 1722 aa21.6■■□□□ 1.05
TFRC-204ENST00000421258 ARHGAP35Q9NRY4 1499 aa21.59■■□□□ 1.05
TFRC-204ENST00000421258 CDC42BPBQ9Y5S2 1711 aa21.58■■□□□ 1.05
TFRC-204ENST00000421258 MLH3Q9UHC1 1453 aa21.58■■□□□ 1.04
TFRC-204ENST00000421258 FMN1Q68DA7 1419 aa21.56■■□□□ 1.04
TFRC-204ENST00000421258 ABCC1P33527 1531 aa21.56■■□□□ 1.04
TFRC-204ENST00000421258 AGLP35573 1532 aa21.56■■□□□ 1.04
TFRC-204ENST00000421258 CAMSAP1Q5T5Y3 1602 aa21.55■■□□□ 1.04
TFRC-204ENST00000421258 IQSEC2Q5JU85 1478 aa21.54■■□□□ 1.04
TFRC-204ENST00000421258 ITSN2Q9NZM3 1697 aa21.53■■□□□ 1.04
TFRC-204ENST00000421258 CDK11AQ9UQ88 783 aaPredicted RBP21.53■■□□□ 1.04
TFRC-204ENST00000421258 PREX2Q70Z35 1606 aa21.53■■□□□ 1.04
TFRC-204ENST00000421258 KIDINS220Q9ULH0 1771 aa21.53■■□□□ 1.04
TFRC-204ENST00000421258 ZNF335Q9H4Z2 1342 aaPredicted RBP21.53■■□□□ 1.04
TFRC-204ENST00000421258 ESF1Q9H501 851 aaKnown RBP21.52■■□□□ 1.04
TFRC-204ENST00000421258 CLIP1P30622 1438 aa21.52■■□□□ 1.04
TFRC-204ENST00000421258 NCKAP5LQ9HCH0 1330 aa21.51■■□□□ 1.03
TFRC-204ENST00000421258 UBAP1LF5GYI3 381 aa21.47■■□□□ 1.03
TFRC-204ENST00000421258 UBTFP17480 764 aaKnown RBP21.47■■□□□ 1.03
TFRC-204ENST00000421258 CNTLNQ9NXG0 1405 aa21.46■■□□□ 1.03
TFRC-204ENST00000421258 NPATQ14207 1427 aa21.44■■□□□ 1.02
TFRC-204ENST00000421258 SAMD9LQ8IVG5 1584 aa21.44■■□□□ 1.02
TFRC-204ENST00000421258 MROH2AA6NES4 1674 aa21.44■■□□□ 1.02
TFRC-204ENST00000421258 MYO3AQ8NEV4 1616 aa21.43■■□□□ 1.02
TFRC-204ENST00000421258 ZMYM3Q14202 1370 aa21.42■■□□□ 1.02
TFRC-204ENST00000421258 CDC42BPAQ5VT25 1732 aa21.42■■□□□ 1.02
TFRC-204ENST00000421258 SUPT6HQ7KZ85 1726 aaKnown RBP21.41■■□□□ 1.02
TFRC-204ENST00000421258 CLTCQ00610 1675 aaKnown RBP21.4■■□□□ 1.02
TFRC-204ENST00000421258 SYCP2Q9BX26 1530 aa21.39■■□□□ 1.02
TFRC-204ENST00000421258 ZNF142P52746 1687 aaPredicted RBP21.39■■□□□ 1.01
TFRC-204ENST00000421258 CEP170BQ9Y4F5 1589 aaPredicted RBP21.38■■□□□ 1.01
TFRC-204ENST00000421258 ZNF777Q9ULD5 760 aaPredicted RBP21.37■■□□□ 1.01
TFRC-204ENST00000421258 TCOF1Q13428 1488 aaKnown RBP21.37■■□□□ 1.01
TFRC-204ENST00000421258 PLA2R1Q13018 1463 aa21.35■■□□□ 1.01
TFRC-204ENST00000421258 PTPRKQ15262 1439 aa21.35■■□□□ 1.01
TFRC-204ENST00000421258 PLXNC1O60486 1568 aa21.34■■□□□ 1.01
TFRC-204ENST00000421258 MED1Q15648 1581 aaPredicted RBP21.34■■□□□ 1.01
TFRC-204ENST00000421258 CCDC18Q5T9S5 1454 aa21.32■■□□□ 1
TFRC-204ENST00000421258 SPAG9O60271 1321 aaKnown RBP21.32■■□□□ 1
TFRC-204ENST00000421258 CASKIN1Q8WXD9 1431 aa21.32■■□□□ 1
TFRC-204ENST00000421258 HNRNPMP52272 730 aaKnown RBP eCLIP21.32■■□□□ 17e-9■□□□□ 10
TFRC-204ENST00000421258 ATP7AQ04656 1500 aa21.32■■□□□ 1
TFRC-204ENST00000421258 HSPA1LP34931 641 aa21.31■■□□□ 1
TFRC-204ENST00000421258 INO80Q9ULG1 1556 aaPredicted RBP21.31■■□□□ 1
TFRC-204ENST00000421258 SCAF1Q9H7N4 1312 aaKnown RBP21.3■■□□□ 1
TFRC-204ENST00000421258 PIP4K2BP78356 416 aa21.29■■□□□ 1
TFRC-204ENST00000421258 PKD2Q13563 968 aa21.29■■□□□ 1
TFRC-204ENST00000421258 PPP6R1Q9UPN7 881 aa21.29■■□□□ 1
TFRC-204ENST00000421258 GPATCH8Q9UKJ3 1502 aaKnown RBP21.29■■□□□ 1
TFRC-204ENST00000421258 A2MP01023 1474 aa21.28■■□□□ 1
TFRC-204ENST00000421258 GGT6Q6P531 493 aa21.27■■□□□ 1
TFRC-204ENST00000421258 NEURL4Q96JN8 1562 aa21.24■□□□□ 0.99
TFRC-204ENST00000421258 DNMT1P26358 1616 aaKnown RBP21.24■□□□□ 0.99
TFRC-204ENST00000421258 A2ML1A8K2U0 1454 aa21.22■□□□□ 0.99
TFRC-204ENST00000421258 FYCO1Q9BQS8 1478 aa21.2■□□□□ 0.98
TFRC-204ENST00000421258 ALKQ9UM73 1620 aa21.19■□□□□ 0.98
TFRC-204ENST00000421258 POLR1AO95602 1720 aaPredicted RBP21.19■□□□□ 0.98
TFRC-204ENST00000421258 KIAA1107Q9UPP5 1409 aa21.19■□□□□ 0.98
TFRC-204ENST00000421258 CFDP1Q9UEE9 299 aaPredicted RBP21.17■□□□□ 0.98
TFRC-204ENST00000421258 SHANK2Q9UPX8 1470 aa21.17■□□□□ 0.98
TFRC-204ENST00000421258 CPS1P31327 1500 aa21.16■□□□□ 0.98
TFRC-204ENST00000421258 ZNF644Q9H582 1327 aaPredicted RBP21.16■□□□□ 0.98
TFRC-204ENST00000421258 FBXO31Q5XUX0 539 aaPredicted RBP21.16■□□□□ 0.98
TFRC-204ENST00000421258 SENP3Q9H4L4 574 aaPredicted RBP21.16■□□□□ 0.98
TFRC-204ENST00000421258 ADGBQ8N7X0 1667 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms