RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 MIA2Q96PC5 1412 aa15.48■□□□□ 0.07
DDX56-203ENST00000421223 ARHGEF11O15085 1522 aa15.47■□□□□ 0.07
DDX56-203ENST00000421223 ZNF326Q5BKZ1 582 aaKnown RBP15.47■□□□□ 0.07
DDX56-203ENST00000421223 RAPGEF6Q8TEU7 1601 aa15.46■□□□□ 0.07
DDX56-203ENST00000421223 L3MBTL2Q969R5 705 aa15.46■□□□□ 0.06
DDX56-203ENST00000421223 DAPK1P53355 1430 aa15.44■□□□□ 0.06
DDX56-203ENST00000421223 KDM6BO15054 1643 aa15.44■□□□□ 0.06
DDX56-203ENST00000421223 TCOF1Q13428 1488 aaKnown RBP15.44■□□□□ 0.06
DDX56-203ENST00000421223 ABCC5O15440 1437 aa15.44■□□□□ 0.06
DDX56-203ENST00000421223 TROQ12816 1431 aaPredicted RBP15.44■□□□□ 0.06
DDX56-203ENST00000421223 ANP32CO43423 234 aa15.44■□□□□ 0.06
DDX56-203ENST00000421223 CNGB1Q14028 1251 aaPredicted RBP15.43■□□□□ 0.06
DDX56-203ENST00000421223 HNRNPMP52272 730 aaKnown RBP eCLIP15.43■□□□□ 0.06
DDX56-203ENST00000421223 PTPRGP23470 1445 aa15.41■□□□□ 0.06
DDX56-203ENST00000421223 NUP160Q12769 1436 aa15.41■□□□□ 0.06
DDX56-203ENST00000421223 HSPA5P11021 654 aaKnown RBP15.4■□□□□ 0.06
DDX56-203ENST00000421223 POLR3GLQ9BT43 218 aa15.4■□□□□ 0.06
DDX56-203ENST00000421223 TSPY4P0CV99 314 aa15.4■□□□□ 0.06
DDX56-203ENST00000421223 TSPY10P0CW01 314 aa15.4■□□□□ 0.06
DDX56-203ENST00000421223 GPATCH8Q9UKJ3 1502 aaKnown RBP15.37■□□□□ 0.05
DDX56-203ENST00000421223 PKD2Q13563 968 aa15.37■□□□□ 0.05
DDX56-203ENST00000421223 EIF4G2P78344 907 aaKnown RBP eCLIP15.36■□□□□ 0.05
DDX56-203ENST00000421223 ATP10BO94823 1461 aa15.35■□□□□ 0.05
DDX56-203ENST00000421223 CAMSAP2Q08AD1 1489 aa15.35■□□□□ 0.05
DDX56-203ENST00000421223 KIF14Q15058 1648 aa15.35■□□□□ 0.05
DDX56-203ENST00000421223 DENND4BO75064 1496 aaPredicted RBP15.34■□□□□ 0.05
DDX56-203ENST00000421223 NBPF8Q3BBV2 869 aa15.33■□□□□ 0.05
DDX56-203ENST00000421223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.33■□□□□ 0.052e-7■■□□□ 11.7
DDX56-203ENST00000421223 KDM2AQ9Y2K7 1162 aa15.32■□□□□ 0.04
DDX56-203ENST00000421223 ROCK1Q13464 1354 aa15.32■□□□□ 0.04
DDX56-203ENST00000421223 AKNAQ7Z591 1439 aa15.32■□□□□ 0.04
DDX56-203ENST00000421223 ANKRD30AQ9BXX3 1397 aa15.32■□□□□ 0.04
DDX56-203ENST00000421223 NCOA1Q15788 1441 aa15.31■□□□□ 0.04
DDX56-203ENST00000421223 NUP155O75694 1391 aa15.3■□□□□ 0.04
DDX56-203ENST00000421223 ANKRD30BQ9BXX2 1392 aa15.29■□□□□ 0.04
DDX56-203ENST00000421223 WASHC2AQ641Q2 1341 aa15.29■□□□□ 0.04
DDX56-203ENST00000421223 BCANQ96GW7 911 aa15.28■□□□□ 0.04
DDX56-203ENST00000421223 DNMT1P26358 1616 aaKnown RBP15.28■□□□□ 0.04
DDX56-203ENST00000421223 GCC2Q8IWJ2 1684 aa15.28■□□□□ 0.04
DDX56-203ENST00000421223 C11orf95C9JLR9 678 aaPredicted RBP15.27■□□□□ 0.03
DDX56-203ENST00000421223 ANKRD50Q9ULJ7 1429 aa15.27■□□□□ 0.03
DDX56-203ENST00000421223 MYT1LQ9UL68 1186 aa15.24■□□□□ 0.03
DDX56-203ENST00000421223 C9orf84Q5VXU9 1444 aa15.24■□□□□ 0.03
DDX56-203ENST00000421223 RGL3Q3MIN7 710 aa15.23■□□□□ 0.03
DDX56-203ENST00000421223 ABCA8O94911 1581 aa15.23■□□□□ 0.03
DDX56-203ENST00000421223 SUPT16HQ9Y5B9 1047 aaKnown RBP15.22■□□□□ 0.03
DDX56-203ENST00000421223 KDM5BQ9UGL1 1544 aa15.22■□□□□ 0.03
DDX56-203ENST00000421223 KIF15Q9NS87 1388 aa15.22■□□□□ 0.03
DDX56-203ENST00000421223 CCER2I3L3R5 266 aa15.2■□□□□ 0.02
DDX56-203ENST00000421223 HNRNPUQ00839 825 aaKnown RBP eCLIP15.2■□□□□ 0.02
DDX56-203ENST00000421223 RPRD2Q5VT52 1461 aaKnown RBP15.2■□□□□ 0.02
DDX56-203ENST00000421223 DCAF11Q8TEB1 546 aa15.2■□□□□ 0.02
DDX56-203ENST00000421223 ERCC6L2Q5T890 1561 aa15.2■□□□□ 0.02
DDX56-203ENST00000421223 PZPP20742 1482 aa15.2■□□□□ 0.02
DDX56-203ENST00000421223 ITSN2Q9NZM3 1697 aa15.19■□□□□ 0.02
DDX56-203ENST00000421223 CHD1O14646 1710 aa15.19■□□□□ 0.02
DDX56-203ENST00000421223 ABCC10Q5T3U5 1492 aa15.19■□□□□ 0.02
DDX56-203ENST00000421223 FAM9BQ8IZU0 186 aa15.18■□□□□ 0.02
DDX56-203ENST00000421223 FKBP8Q14318 412 aa15.18■□□□□ 0.02
DDX56-203ENST00000421223 KIAA1107Q9UPP5 1409 aa15.18■□□□□ 0.02
DDX56-203ENST00000421223 SENP3-EIF4A1A0A087X0R7 540 aa15.16■□□□□ 0.02
DDX56-203ENST00000421223 CCDC184Q52MB2 194 aa15.16■□□□□ 0.02
DDX56-203ENST00000421223 CARD11Q9BXL7 1154 aa15.15■□□□□ 0.02
DDX56-203ENST00000421223 ERICH6Q7L0X2 663 aa15.15■□□□□ 0.02
DDX56-203ENST00000421223 ARHGAP5Q13017 1502 aa15.15■□□□□ 0.02
DDX56-203ENST00000421223 CDC42BPAQ5VT25 1732 aa15.14■□□□□ 0.01
DDX56-203ENST00000421223 KIF7Q2M1P5 1343 aa15.14■□□□□ 0.01
DDX56-203ENST00000421223 CCDC7Q96M83 1385 aa15.13■□□□□ 0.01
DDX56-203ENST00000421223 MRS2Q9HD23 443 aa15.13■□□□□ 0.01
DDX56-203ENST00000421223 NEFLP07196 543 aa15.12■□□□□ 0.01
DDX56-203ENST00000421223 TEX14Q8IWB6 1497 aa15.12■□□□□ 0.01
DDX56-203ENST00000421223 ADCY10Q96PN6 1610 aa15.11■□□□□ 0.01
DDX56-203ENST00000421223 ADGRL2O95490 1459 aa15.11■□□□□ 0.01
DDX56-203ENST00000421223 EFCAB2Q5VUJ9 269 aa15.11■□□□□ 0.01
DDX56-203ENST00000421223 AFAP1Q8N556 730 aa15.11■□□□□ 0.01
DDX56-203ENST00000421223 RSPH4AQ5TD94 716 aa15.1■□□□□ 0.01
DDX56-203ENST00000421223 USP47Q96K76 1375 aa15.09■□□□□ 0.01
DDX56-203ENST00000421223 MBD5Q9P267 1494 aa15.09■□□□□ 0.01
DDX56-203ENST00000421223 PRKRIP1Q9H875 184 aaPredicted RBP15.09■□□□□ 0.01
DDX56-203ENST00000421223 CCDC141Q6ZP82 1450 aa15.09■□□□□ 0.01
DDX56-203ENST00000421223 IRX6P78412 446 aaPredicted RBP15.08■□□□□ 0
DDX56-203ENST00000421223 SYCP2Q9BX26 1530 aa15.08■□□□□ 0
DDX56-203ENST00000421223 ADGBQ8N7X0 1667 aa15.07■□□□□ 0
DDX56-203ENST00000421223 ST20-MTHFSA0A0A6YYL1 179 aa15.07■□□□□ 0
DDX56-203ENST00000421223 CNTLNQ9NXG0 1405 aa15.07■□□□□ 0
DDX56-203ENST00000421223 SAMD9LQ8IVG5 1584 aa15.05■□□□□ 0
DDX56-203ENST00000421223 TTC37Q6PGP7 1564 aa15.04■□□□□ -0
DDX56-203ENST00000421223 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.04■□□□□ -0
DDX56-203ENST00000421223 ABCC2Q92887 1545 aa15.04■□□□□ -0
DDX56-203ENST00000421223 PLEKHH2Q8IVE3 1493 aa15.03■□□□□ -0
DDX56-203ENST00000421223 SHANK2Q9UPX8 1470 aa15.03■□□□□ -0
DDX56-203ENST00000421223 CROCC2H7BZ55 1655 aa15.03■□□□□ -0
DDX56-203ENST00000421223 NBPF1Q3BBV0 1214 aa15.03■□□□□ -0
DDX56-203ENST00000421223 SPAG9O60271 1321 aaKnown RBP15.02■□□□□ -0
DDX56-203ENST00000421223 CDC42BPBQ9Y5S2 1711 aa15.02□□□□□ -0.01
DDX56-203ENST00000421223 CCDC144AA2RUR9 1427 aa15.02□□□□□ -0.01
DDX56-203ENST00000421223 BCL11AQ9H165 835 aa15.01□□□□□ -0.01
DDX56-203ENST00000421223 ROCK2O75116 1388 aaKnown RBP15.01□□□□□ -0.01
DDX56-203ENST00000421223 SPATA31E1Q6ZUB1 1445 aa15□□□□□ -0.01
DDX56-203ENST00000421223 NPM1P06748 294 aaKnown RBP eCLIP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms