RNA–Protein interactions for RNA: ENST00000420720.5

RFX3-205, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-205ENST00000420720 ATXN8OSP0DMR3 200 aa12.24□□□□□ -0.45
RFX3-205ENST00000420720 STRCQ7RTU9 1775 aa12.23□□□□□ -0.45
RFX3-205ENST00000420720 IQGAP2Q13576 1575 aa12.23□□□□□ -0.45
RFX3-205ENST00000420720 CHRDL2Q6WN34 429 aa12.23□□□□□ -0.45
RFX3-205ENST00000420720 RAPGEF2Q9Y4G8 1499 aa12.22□□□□□ -0.45
RFX3-205ENST00000420720 DISP1Q96F81 1524 aa12.21□□□□□ -0.45
RFX3-205ENST00000420720 LTBP4Q8N2S1 1624 aa12.21□□□□□ -0.46
RFX3-205ENST00000420720 MED1Q15648 1581 aaPredicted RBP12.2□□□□□ -0.46
RFX3-205ENST00000420720 YEATS2Q9ULM3 1422 aa12.19□□□□□ -0.46
RFX3-205ENST00000420720 ARID4BQ4LE39 1312 aaPredicted RBP12.18□□□□□ -0.46
RFX3-205ENST00000420720 FRMPD1Q5SYB0 1578 aa12.18□□□□□ -0.46
RFX3-205ENST00000420720 IQSEC2Q5JU85 1478 aa12.17□□□□□ -0.46
RFX3-205ENST00000420720 UGGT2Q9NYU1 1516 aa12.16□□□□□ -0.46
RFX3-205ENST00000420720 AKT1S1Q96B36 256 aa12.16□□□□□ -0.46
RFX3-205ENST00000420720 RAPGEF3O95398 923 aa12.15□□□□□ -0.46
RFX3-205ENST00000420720 SIGLEC1Q9BZZ2 1709 aa12.14□□□□□ -0.47
RFX3-205ENST00000420720 KIAA0556O60303 1618 aa12.13□□□□□ -0.47
RFX3-205ENST00000420720 KCNH8Q96L42 1107 aa12.13□□□□□ -0.47
RFX3-205ENST00000420720 PREX1Q8TCU6 1659 aa12.13□□□□□ -0.47
RFX3-205ENST00000420720 TTC37Q6PGP7 1564 aa12.11□□□□□ -0.47
RFX3-205ENST00000420720 ARHGEF40Q8TER5 1519 aa12.11□□□□□ -0.47
RFX3-205ENST00000420720 PTPRTO14522 1441 aa12.1□□□□□ -0.47
RFX3-205ENST00000420720 REM2Q8IYK8 340 aaPredicted RBP12.09□□□□□ -0.47
RFX3-205ENST00000420720 PRXQ9BXM0 1461 aa12.08□□□□□ -0.47
RFX3-205ENST00000420720 P3H3Q8IVL6 736 aa12.08□□□□□ -0.48
RFX3-205ENST00000420720 GOLGA3Q08378 1498 aa12.08□□□□□ -0.48
RFX3-205ENST00000420720 FER1L4A9Z1Z3 1794 aa12.06□□□□□ -0.48
RFX3-205ENST00000420720 ARID3CA6NKF2 412 aa12.05□□□□□ -0.48
RFX3-205ENST00000420720 UBAP1LF5GYI3 381 aa12.05□□□□□ -0.48
RFX3-205ENST00000420720 MKRN4PQ13434 485 aaPredicted RBP12.05□□□□□ -0.48
RFX3-205ENST00000420720 PHLDB1Q86UU1 1377 aa12.05□□□□□ -0.48
RFX3-205ENST00000420720 FAM9AQ8IZU1 332 aaPredicted RBP12.03□□□□□ -0.48
RFX3-205ENST00000420720 CSRNP3Q8WYN3 585 aa12.03□□□□□ -0.48
RFX3-205ENST00000420720 ABCA8O94911 1581 aa12.02□□□□□ -0.49
RFX3-205ENST00000420720 HSPA1LP34931 641 aa12.02□□□□□ -0.49
RFX3-205ENST00000420720 FANCAO15360 1455 aa12.02□□□□□ -0.49
RFX3-205ENST00000420720 NEO1Q92859 1461 aa12.02□□□□□ -0.49
RFX3-205ENST00000420720 ABCA9Q8IUA7 1624 aa12.01□□□□□ -0.49
RFX3-205ENST00000420720 CTTNBP2Q8WZ74 1663 aa12.01□□□□□ -0.49
RFX3-205ENST00000420720 PITPNM1O00562 1244 aa12.01□□□□□ -0.49
RFX3-205ENST00000420720 CEBPAP49715 358 aaPredicted RBP12.01□□□□□ -0.49
RFX3-205ENST00000420720 POGZQ7Z3K3 1410 aa12.01□□□□□ -0.49
RFX3-205ENST00000420720 RICTORQ6R327 1708 aa12□□□□□ -0.49
RFX3-205ENST00000420720 RANGAP1P46060 587 aaPredicted RBP11.99□□□□□ -0.49
RFX3-205ENST00000420720 MLECQ14165 292 aa11.99□□□□□ -0.49
RFX3-205ENST00000420720 UHRF1BP1Q6BDS2 1440 aa11.99□□□□□ -0.49
RFX3-205ENST00000420720 ARHGEF12Q9NZN5 1544 aa11.98□□□□□ -0.49
RFX3-205ENST00000420720 ATP10BO94823 1461 aa11.97□□□□□ -0.49
RFX3-205ENST00000420720 PIP4P2Q8N4L2 257 aa11.97□□□□□ -0.49
RFX3-205ENST00000420720 AKNAQ7Z591 1439 aa11.96□□□□□ -0.49
RFX3-205ENST00000420720 ZNF335Q9H4Z2 1342 aaPredicted RBP11.95□□□□□ -0.5
RFX3-205ENST00000420720 NCOA1Q15788 1441 aa11.94□□□□□ -0.5
RFX3-205ENST00000420720 FHOD3Q2V2M9 1422 aa11.94□□□□□ -0.5
RFX3-205ENST00000420720 SRCAPQ6ZRS2 3230 aa11.94□□□□□ -0.5
RFX3-205ENST00000420720 ZMYM4Q5VZL5 1548 aa11.93□□□□□ -0.5
RFX3-205ENST00000420720 ZFYVE16Q7Z3T8 1539 aa11.93□□□□□ -0.5
RFX3-205ENST00000420720 RGS17Q9UGC6 210 aaPredicted RBP11.93□□□□□ -0.5
RFX3-205ENST00000420720 DENND4BO75064 1496 aaPredicted RBP11.92□□□□□ -0.5
RFX3-205ENST00000420720 SPDYE2BA6NHP3 402 aa11.92□□□□□ -0.5
RFX3-205ENST00000420720 SPDYE6P0CI01 402 aa11.92□□□□□ -0.5
RFX3-205ENST00000420720 SPDYE2Q495Y8 402 aa11.92□□□□□ -0.5
RFX3-205ENST00000420720 EEA1Q15075 1411 aa11.9□□□□□ -0.5
RFX3-205ENST00000420720 EFCAB5A4FU69 1503 aa11.9□□□□□ -0.5
RFX3-205ENST00000420720 SAMD9Q5K651 1589 aa11.89□□□□□ -0.51
RFX3-205ENST00000420720 FXR2P51116 673 aaKnown RBP eCLIP11.88□□□□□ -0.51
RFX3-205ENST00000420720 PIP4K2BP78356 416 aa11.88□□□□□ -0.51
RFX3-205ENST00000420720 SETD1BQ9UPS6 1966 aaKnown RBP11.88□□□□□ -0.51
RFX3-205ENST00000420720 RAPGEF6Q8TEU7 1601 aa11.87□□□□□ -0.51
RFX3-205ENST00000420720 PLEKHD1A6NEE1 506 aa11.87□□□□□ -0.51
RFX3-205ENST00000420720 EHMT2Q96KQ7 1210 aa11.87□□□□□ -0.51
RFX3-205ENST00000420720 NUP153P49790 1475 aaKnown RBP11.87□□□□□ -0.51
RFX3-205ENST00000420720 HECW1Q76N89 1606 aa11.86□□□□□ -0.51
RFX3-205ENST00000420720 SSUH2Q9Y2M2 353 aa11.85□□□□□ -0.51
RFX3-205ENST00000420720 C3P01024 1663 aa11.84□□□□□ -0.51
RFX3-205ENST00000420720 MAGI2Q86UL8 1455 aa11.84□□□□□ -0.51
RFX3-205ENST00000420720 CAMSAP1Q5T5Y3 1602 aa11.84□□□□□ -0.51
RFX3-205ENST00000420720 ALKQ9UM73 1620 aa11.84□□□□□ -0.51
RFX3-205ENST00000420720 SETD1AO15047 1707 aaKnown RBP11.82□□□□□ -0.52
RFX3-205ENST00000420720 NCKAP5LQ9HCH0 1330 aa11.82□□□□□ -0.52
RFX3-205ENST00000420720 UBTFP17480 764 aaKnown RBP11.81□□□□□ -0.52
RFX3-205ENST00000420720 ATP1B4Q9UN42 357 aaPredicted RBP11.81□□□□□ -0.52
RFX3-205ENST00000420720 C9orf84Q5VXU9 1444 aa11.8□□□□□ -0.52
RFX3-205ENST00000420720 ATP10AO60312 1499 aa11.8□□□□□ -0.52
RFX3-205ENST00000420720 POTEAQ6S8J7 498 aa11.79□□□□□ -0.52
RFX3-205ENST00000420720 TRAPPC8Q9Y2L5 1435 aa11.78□□□□□ -0.52
RFX3-205ENST00000420720 CFAP74Q9C0B2 1584 aa11.77□□□□□ -0.53
RFX3-205ENST00000420720 TOM1O60784 492 aa11.77□□□□□ -0.53
RFX3-205ENST00000420720 SP7Q8TDD2 431 aaPredicted RBP11.77□□□□□ -0.53
RFX3-205ENST00000420720 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.76□□□□□ -0.53
RFX3-205ENST00000420720 CDK13Q14004 1512 aaKnown RBP11.76□□□□□ -0.53
RFX3-205ENST00000420720 ZNF692Q9BU19 519 aaPredicted RBP11.75□□□□□ -0.53
RFX3-205ENST00000420720 TCOF1Q13428 1488 aaKnown RBP11.75□□□□□ -0.53
RFX3-205ENST00000420720 PLCH2O75038 1416 aa11.72□□□□□ -0.53
RFX3-205ENST00000420720 SCAPERQ9BY12 1400 aa11.72□□□□□ -0.53
RFX3-205ENST00000420720 CDK11AQ9UQ88 783 aaPredicted RBP11.72□□□□□ -0.53
RFX3-205ENST00000420720 PLA2R1Q13018 1463 aa11.71□□□□□ -0.53
RFX3-205ENST00000420720 ARHGAP35Q9NRY4 1499 aa11.71□□□□□ -0.53
RFX3-205ENST00000420720 FMN1Q68DA7 1419 aa11.71□□□□□ -0.53
RFX3-205ENST00000420720 CPS1P31327 1500 aa11.7□□□□□ -0.54
RFX3-205ENST00000420720 EFCAB2Q5VUJ9 269 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms