RNA–Protein interactions for RNA: ENST00000419241.1

ITSN1-214, Transcript of intersectin 1, humanhuman

TSL 5

Gene ITSN1, Length 779 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-214ENST00000419241 PIP4K2BP78356 416 aa12.81□□□□□ -0.36
ITSN1-214ENST00000419241 PRXQ9BXM0 1461 aa12.8□□□□□ -0.36
ITSN1-214ENST00000419241 EFCAB5A4FU69 1503 aa12.79□□□□□ -0.36
ITSN1-214ENST00000419241 RICTORQ6R327 1708 aa12.79□□□□□ -0.36
ITSN1-214ENST00000419241 ZMYM4Q5VZL5 1548 aa12.78□□□□□ -0.36
ITSN1-214ENST00000419241 CSRNP3Q8WYN3 585 aa12.78□□□□□ -0.36
ITSN1-214ENST00000419241 RAPGEF2Q9Y4G8 1499 aa12.78□□□□□ -0.36
ITSN1-214ENST00000419241 EHMT2Q96KQ7 1210 aa12.76□□□□□ -0.37
ITSN1-214ENST00000419241 ATP10BO94823 1461 aa12.76□□□□□ -0.37
ITSN1-214ENST00000419241 MAGI2Q86UL8 1455 aa12.76□□□□□ -0.37
ITSN1-214ENST00000419241 RGS17Q9UGC6 210 aaPredicted RBP12.75□□□□□ -0.37
ITSN1-214ENST00000419241 SETD1BQ9UPS6 1966 aaKnown RBP12.73□□□□□ -0.37
ITSN1-214ENST00000419241 TOM1O60784 492 aa12.73□□□□□ -0.37
ITSN1-214ENST00000419241 NCKAP5LQ9HCH0 1330 aa12.71□□□□□ -0.37
ITSN1-214ENST00000419241 GOLGA3Q08378 1498 aa12.71□□□□□ -0.38
ITSN1-214ENST00000419241 ATP10AO60312 1499 aa12.7□□□□□ -0.38
ITSN1-214ENST00000419241 C9orf84Q5VXU9 1444 aa12.7□□□□□ -0.38
ITSN1-214ENST00000419241 TRAPPC8Q9Y2L5 1435 aa12.7□□□□□ -0.38
ITSN1-214ENST00000419241 HECW1Q76N89 1606 aa12.7□□□□□ -0.38
ITSN1-214ENST00000419241 CAMSAP1Q5T5Y3 1602 aa12.69□□□□□ -0.38
ITSN1-214ENST00000419241 CTTNBP2Q8WZ74 1663 aa12.65□□□□□ -0.38
ITSN1-214ENST00000419241 LOC105371045A0A1W2PR82 267 aa12.65□□□□□ -0.38
ITSN1-214ENST00000419241 POTEAQ6S8J7 498 aa12.65□□□□□ -0.38
ITSN1-214ENST00000419241 SRCAPQ6ZRS2 3230 aa12.65□□□□□ -0.38
ITSN1-214ENST00000419241 CFAP74Q9C0B2 1584 aa12.64□□□□□ -0.39
ITSN1-214ENST00000419241 SENP3Q9H4L4 574 aaPredicted RBP12.64□□□□□ -0.39
ITSN1-214ENST00000419241 PKD2Q13563 968 aa12.63□□□□□ -0.39
ITSN1-214ENST00000419241 C3P01024 1663 aa12.63□□□□□ -0.39
ITSN1-214ENST00000419241 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.62□□□□□ -0.39
ITSN1-214ENST00000419241 HNRNPUL2Q1KMD3 747 aaKnown RBP12.62□□□□□ -0.39
ITSN1-214ENST00000419241 PPP6R1Q9UPN7 881 aa12.62□□□□□ -0.39
ITSN1-214ENST00000419241 SCAPERQ9BY12 1400 aa12.6□□□□□ -0.39
ITSN1-214ENST00000419241 ESF1Q9H501 851 aaKnown RBP12.59□□□□□ -0.39
ITSN1-214ENST00000419241 PTPRKQ15262 1439 aa12.59□□□□□ -0.39
ITSN1-214ENST00000419241 PLA2R1Q13018 1463 aa12.59□□□□□ -0.39
ITSN1-214ENST00000419241 TCOF1Q13428 1488 aaKnown RBP12.59□□□□□ -0.39
ITSN1-214ENST00000419241 UBTFP17480 764 aaKnown RBP12.58□□□□□ -0.4
ITSN1-214ENST00000419241 ALKQ9UM73 1620 aa12.58□□□□□ -0.4
ITSN1-214ENST00000419241 CPS1P31327 1500 aa12.57□□□□□ -0.4
ITSN1-214ENST00000419241 NPATQ14207 1427 aa12.55□□□□□ -0.4
ITSN1-214ENST00000419241 SETD1AO15047 1707 aaKnown RBP12.55□□□□□ -0.4
ITSN1-214ENST00000419241 RANGAP1P46060 587 aaPredicted RBP12.55□□□□□ -0.4
ITSN1-214ENST00000419241 UPF1Q92900 1129 aaKnown RBP eCLIP12.55□□□□□ -0.4
ITSN1-214ENST00000419241 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.54□□□□□ -0.4
ITSN1-214ENST00000419241 P3H3Q8IVL6 736 aa12.54□□□□□ -0.4
ITSN1-214ENST00000419241 SAMD9Q5K651 1589 aa12.53□□□□□ -0.4
ITSN1-214ENST00000419241 CNTLNQ9NXG0 1405 aa12.53□□□□□ -0.4
ITSN1-214ENST00000419241 SHANK2Q9UPX8 1470 aa12.53□□□□□ -0.4
ITSN1-214ENST00000419241 PLEKHD1A6NEE1 506 aa12.52□□□□□ -0.41
ITSN1-214ENST00000419241 CEP162Q5TB80 1403 aa12.52□□□□□ -0.41
ITSN1-214ENST00000419241 ARHGAP35Q9NRY4 1499 aa12.51□□□□□ -0.41
ITSN1-214ENST00000419241 AGLP35573 1532 aa12.51□□□□□ -0.41
ITSN1-214ENST00000419241 RAPGEF6Q8TEU7 1601 aa12.5□□□□□ -0.41
ITSN1-214ENST00000419241 NUP153P49790 1475 aaKnown RBP12.49□□□□□ -0.41
ITSN1-214ENST00000419241 REREQ9P2R6 1566 aa12.48□□□□□ -0.41
ITSN1-214ENST00000419241 CLIP1P30622 1438 aa12.48□□□□□ -0.41
ITSN1-214ENST00000419241 MYT1LQ9UL68 1186 aa12.48□□□□□ -0.41
ITSN1-214ENST00000419241 DIP2CQ9Y2E4 1556 aa12.47□□□□□ -0.41
ITSN1-214ENST00000419241 CEP170BQ9Y4F5 1589 aaPredicted RBP12.47□□□□□ -0.41
ITSN1-214ENST00000419241 ZNF518AQ6AHZ1 1483 aa12.46□□□□□ -0.41
ITSN1-214ENST00000419241 PLCH2O75038 1416 aa12.46□□□□□ -0.41
ITSN1-214ENST00000419241 ZNF142P52746 1687 aaPredicted RBP12.46□□□□□ -0.41
ITSN1-214ENST00000419241 AFAP1Q8N556 730 aa12.46□□□□□ -0.41
ITSN1-214ENST00000419241 ZMYM3Q14202 1370 aa12.45□□□□□ -0.42
ITSN1-214ENST00000419241 MYO3AQ8NEV4 1616 aa12.44□□□□□ -0.42
ITSN1-214ENST00000419241 KDM5CP41229 1560 aa12.43□□□□□ -0.42
ITSN1-214ENST00000419241 EFCAB2Q5VUJ9 269 aa12.42□□□□□ -0.42
ITSN1-214ENST00000419241 VWDEQ8N2E2 1590 aa12.42□□□□□ -0.42
ITSN1-214ENST00000419241 ABCA6Q8N139 1617 aa12.41□□□□□ -0.42
ITSN1-214ENST00000419241 NEURL4Q96JN8 1562 aa12.4□□□□□ -0.42
ITSN1-214ENST00000419241 SUPT6HQ7KZ85 1726 aaKnown RBP12.4□□□□□ -0.43
ITSN1-214ENST00000419241 MROH2AA6NES4 1674 aa12.39□□□□□ -0.43
ITSN1-214ENST00000419241 RNF17Q9BXT8 1623 aaKnown RBP12.38□□□□□ -0.43
ITSN1-214ENST00000419241 MLH3Q9UHC1 1453 aa12.38□□□□□ -0.43
ITSN1-214ENST00000419241 LRRC7Q96NW7 1537 aa12.37□□□□□ -0.43
ITSN1-214ENST00000419241 TRIM52Q96A61 297 aa12.37□□□□□ -0.43
ITSN1-214ENST00000419241 A2ML1A8K2U0 1454 aa12.36□□□□□ -0.43
ITSN1-214ENST00000419241 DNMT1P26358 1616 aaKnown RBP12.34□□□□□ -0.43
ITSN1-214ENST00000419241 VPS8Q8N3P4 1428 aa12.33□□□□□ -0.44
ITSN1-214ENST00000419241 POLR1AO95602 1720 aaPredicted RBP12.32□□□□□ -0.44
ITSN1-214ENST00000419241 ANKLE2Q86XL3 938 aa12.32□□□□□ -0.44
ITSN1-214ENST00000419241 NPHP4O75161 1426 aaPredicted RBP12.31□□□□□ -0.44
ITSN1-214ENST00000419241 FAM135BQ49AJ0 1406 aa12.31□□□□□ -0.44
ITSN1-214ENST00000419241 FMN1Q68DA7 1419 aa12.31□□□□□ -0.44
ITSN1-214ENST00000419241 LRRIQ1Q96JM4 1722 aa12.31□□□□□ -0.44
ITSN1-214ENST00000419241 SYNMO15061 1565 aa12.3□□□□□ -0.44
ITSN1-214ENST00000419241 ARHGAP5Q13017 1502 aa12.29□□□□□ -0.44
ITSN1-214ENST00000419241 CDK13Q14004 1512 aaKnown RBP12.29□□□□□ -0.44
ITSN1-214ENST00000419241 CLTCQ00610 1675 aaKnown RBP12.29□□□□□ -0.44
ITSN1-214ENST00000419241 CASKIN1Q8WXD9 1431 aa12.28□□□□□ -0.44
ITSN1-214ENST00000419241 FYCO1Q9BQS8 1478 aa12.28□□□□□ -0.44
ITSN1-214ENST00000419241 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.28□□□□□ -0.44
ITSN1-214ENST00000419241 MYO5CQ9NQX4 1742 aa12.28□□□□□ -0.44
ITSN1-214ENST00000419241 MED14O60244 1454 aa12.27□□□□□ -0.44
ITSN1-214ENST00000419241 STRCP1A6NGW2 1772 aa12.26□□□□□ -0.45
ITSN1-214ENST00000419241 ZNF772Q68DY9 489 aaPredicted RBP12.26□□□□□ -0.45
ITSN1-214ENST00000419241 RXRBP28702 533 aa12.24□□□□□ -0.45
ITSN1-214ENST00000419241 ABCC1P33527 1531 aa12.24□□□□□ -0.45
ITSN1-214ENST00000419241 ZRANB1Q9UGI0 708 aa12.24□□□□□ -0.45
ITSN1-214ENST00000419241 KIDINS220Q9ULH0 1771 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms