RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 NUTM2DQ5VT03 806 aaPredicted RBP17.3■□□□□ 0.36
BDNF-208ENST00000418212 NUDCQ9Y266 331 aa17.29■□□□□ 0.36
BDNF-208ENST00000418212 KANK1Q14678 1352 aa17.29■□□□□ 0.36
BDNF-208ENST00000418212 FTSJ3Q8IY81 847 aaKnown RBP17.28■□□□□ 0.36
BDNF-208ENST00000418212 HAP1P54257 671 aaPredicted RBP17.28■□□□□ 0.36
BDNF-208ENST00000418212 IGF1RP08069 1367 aa17.28■□□□□ 0.36
BDNF-208ENST00000418212 ANKRD30AQ9BXX3 1397 aa17.27■□□□□ 0.35
BDNF-208ENST00000418212 PPP4R2Q9NY27 417 aa17.25■□□□□ 0.35
BDNF-208ENST00000418212 RAD54L2Q9Y4B4 1467 aa17.24■□□□□ 0.35
BDNF-208ENST00000418212 MORC1Q86VD1 984 aa17.24■□□□□ 0.35
BDNF-208ENST00000418212 CCER2I3L3R5 266 aa17.23■□□□□ 0.35
BDNF-208ENST00000418212 DHX57Q6P158 1386 aaKnown RBP17.23■□□□□ 0.35
BDNF-208ENST00000418212 ROCK2O75116 1388 aaKnown RBP17.22■□□□□ 0.35
BDNF-208ENST00000418212 SPAG9O60271 1321 aaKnown RBP17.22■□□□□ 0.35
BDNF-208ENST00000418212 ZNF644Q9H582 1327 aaPredicted RBP17.19■□□□□ 0.34
BDNF-208ENST00000418212 FGD5Q6ZNL6 1462 aa17.19■□□□□ 0.34
BDNF-208ENST00000418212 ST20-MTHFSA0A0A6YYL1 179 aa17.17■□□□□ 0.34
BDNF-208ENST00000418212 ANP32BQ92688 251 aaKnown RBP17.17■□□□□ 0.34
BDNF-208ENST00000418212 CYB5RLQ6IPT4 315 aa17.15■□□□□ 0.34
BDNF-208ENST00000418212 WASHC2CQ9Y4E1 1318 aa17.14■□□□□ 0.33
BDNF-208ENST00000418212 CCDC18Q5T9S5 1454 aa17.14■□□□□ 0.33
BDNF-208ENST00000418212 NUTM2FA1L443 756 aa17.14■□□□□ 0.33
BDNF-208ENST00000418212 U2AF1L5P0DN76 240 aaPredicted RBP17.14■□□□□ 0.33
BDNF-208ENST00000418212 U2AF1Q01081 240 aaKnown RBP eCLIP17.14■□□□□ 0.33
BDNF-208ENST00000418212 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.14■□□□□ 0.33
BDNF-208ENST00000418212 ANO8Q9HCE9 1232 aaPredicted RBP17.13■□□□□ 0.33
BDNF-208ENST00000418212 PTPRGP23470 1445 aa17.13■□□□□ 0.33
BDNF-208ENST00000418212 TRAK1Q9UPV9 953 aa17.13■□□□□ 0.33
BDNF-208ENST00000418212 KTN1Q86UP2 1357 aaKnown RBP17.12■□□□□ 0.33
BDNF-208ENST00000418212 AQRO60306 1485 aaKnown RBP eCLIP17.1■□□□□ 0.33
BDNF-208ENST00000418212 GAPVD1Q14C86 1478 aa17.1■□□□□ 0.33
BDNF-208ENST00000418212 RSPH4AQ5TD94 716 aa17.09■□□□□ 0.33
BDNF-208ENST00000418212 HDGFP51858 240 aaKnown RBP17.08■□□□□ 0.33
BDNF-208ENST00000418212 TPRNQ4KMQ1 711 aa17.07■□□□□ 0.32
BDNF-208ENST00000418212 PAK3O75914 559 aaPredicted RBP17.07■□□□□ 0.32
BDNF-208ENST00000418212 BECN1Q14457 450 aa17.07■□□□□ 0.32
BDNF-208ENST00000418212 NCAPD3P42695 1498 aa17.07■□□□□ 0.32
BDNF-208ENST00000418212 CCDC146Q8IYE0 955 aa17.06■□□□□ 0.32
BDNF-208ENST00000418212 PHLDB1Q86UU1 1377 aa17.06■□□□□ 0.32
BDNF-208ENST00000418212 HDGFL2Q7Z4V5 671 aaPredicted RBP17.05■□□□□ 0.32
BDNF-208ENST00000418212 RCAN3Q9UKA8 241 aa17.05■□□□□ 0.32
BDNF-208ENST00000418212 RALBP1Q15311 655 aa17.03■□□□□ 0.32
BDNF-208ENST00000418212 DDRGK1Q96HY6 314 aa17.03■□□□□ 0.32
BDNF-208ENST00000418212 GLIPR1L2Q4G1C9 344 aa17.02■□□□□ 0.32
BDNF-208ENST00000418212 APBB1O00213 710 aa17.02■□□□□ 0.32
BDNF-208ENST00000418212 NLRP13Q86W25 1043 aa17.02■□□□□ 0.32
BDNF-208ENST00000418212 NOP58Q9Y2X3 529 aaKnown RBP17.02■□□□□ 0.32
BDNF-208ENST00000418212 CLUAP1Q96AJ1 413 aa17.01■□□□□ 0.31
BDNF-208ENST00000418212 PANK3Q9H999 370 aa17.01■□□□□ 0.31
BDNF-208ENST00000418212 DNAJC5BQ9UF47 199 aa17.01■□□□□ 0.31
BDNF-208ENST00000418212 NESP48681 1621 aa17.01■□□□□ 0.31
BDNF-208ENST00000418212 CCDC144AA2RUR9 1427 aa16.99■□□□□ 0.31
BDNF-208ENST00000418212 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.99■□□□□ 0.31
BDNF-208ENST00000418212 PRKRIP1Q9H875 184 aaPredicted RBP16.99■□□□□ 0.31
BDNF-208ENST00000418212 TAOK2Q9UL54 1235 aa16.98■□□□□ 0.31
BDNF-208ENST00000418212 NCLP19338 710 aaKnown RBP16.98■□□□□ 0.31
BDNF-208ENST00000418212 PNNQ9H307 717 aaKnown RBP16.98■□□□□ 0.31
BDNF-208ENST00000418212 RRP7AQ9Y3A4 280 aaKnown RBP16.98■□□□□ 0.31
BDNF-208ENST00000418212 OSCARQ8IYS5 282 aa16.97■□□□□ 0.31
BDNF-208ENST00000418212 OS9Q13438 667 aaPredicted RBP16.96■□□□□ 0.31
BDNF-208ENST00000418212 KIF21BO75037 1637 aa16.96■□□□□ 0.31
BDNF-208ENST00000418212 ARAP1Q96P48 1450 aa16.96■□□□□ 0.31
BDNF-208ENST00000418212 RTF1Q92541 710 aaKnown RBP16.95■□□□□ 0.3
BDNF-208ENST00000418212 FGD6Q6ZV73 1430 aa16.94■□□□□ 0.3
BDNF-208ENST00000418212 AFAP1Q8N556 730 aa16.94■□□□□ 0.3
BDNF-208ENST00000418212 MS4A1P11836 297 aa16.94■□□□□ 0.3
BDNF-208ENST00000418212 SPRYD3Q8NCJ5 442 aa16.93■□□□□ 0.3
BDNF-208ENST00000418212 USP47Q96K76 1375 aa16.93■□□□□ 0.3
BDNF-208ENST00000418212 GOLGA2Q08379 1002 aa16.92■□□□□ 0.3
BDNF-208ENST00000418212 TERF2IPQ9NYB0 399 aa16.92■□□□□ 0.3
BDNF-208ENST00000418212 LTV1Q96GA3 475 aaPredicted RBP16.91■□□□□ 0.3
BDNF-208ENST00000418212 SYNJ1O43426 1573 aa16.91■□□□□ 0.3
BDNF-208ENST00000418212 NGDNQ8NEJ9 315 aaKnown RBP16.91■□□□□ 0.3
BDNF-208ENST00000418212 BCL2L13Q9BXK5 485 aa16.9■□□□□ 0.3
BDNF-208ENST00000418212 ELL2O00472 640 aaPredicted RBP16.89■□□□□ 0.3
BDNF-208ENST00000418212 CASC1Q6TDU7 716 aa16.89■□□□□ 0.3
BDNF-208ENST00000418212 MINK1Q8N4C8 1332 aaPredicted RBP16.89■□□□□ 0.29
BDNF-208ENST00000418212 CFTRP13569 1480 aa16.89■□□□□ 0.29
BDNF-208ENST00000418212 PLIN1O60240 522 aa16.89■□□□□ 0.29
BDNF-208ENST00000418212 ITPRIPQ8IWB1 547 aa16.89■□□□□ 0.29
BDNF-208ENST00000418212 MSH5O43196 834 aa16.89■□□□□ 0.29
BDNF-208ENST00000418212 MYOM3Q5VTT5 1437 aa16.89■□□□□ 0.29
BDNF-208ENST00000418212 LRRC9Q6ZRR7 1453 aa16.88■□□□□ 0.29
BDNF-208ENST00000418212 GOLGA6L22H0YM25 854 aa16.88■□□□□ 0.29
BDNF-208ENST00000418212 KIF15Q9NS87 1388 aa16.88■□□□□ 0.29
BDNF-208ENST00000418212 EIF3AQ14152 1382 aaKnown RBP16.87■□□□□ 0.29
BDNF-208ENST00000418212 SMC4Q9NTJ3 1288 aa16.87■□□□□ 0.29
BDNF-208ENST00000418212 ZNF330Q9Y3S2 320 aaPredicted RBP16.87■□□□□ 0.29
BDNF-208ENST00000418212 FANCIQ9NVI1 1328 aa16.87■□□□□ 0.29
BDNF-208ENST00000418212 CSB-PGBD3P0DP91 1061 aa16.86■□□□□ 0.29
BDNF-208ENST00000418212 CHMP4BQ9H444 224 aaKnown RBP16.86■□□□□ 0.29
BDNF-208ENST00000418212 EID1Q9Y6B2 187 aa16.86■□□□□ 0.29
BDNF-208ENST00000418212 KCNJ4P48050 445 aa16.86■□□□□ 0.29
BDNF-208ENST00000418212 ERICH6BQ5W0A0 696 aa16.85■□□□□ 0.29
BDNF-208ENST00000418212 NPHP1O15259 732 aa16.85■□□□□ 0.29
BDNF-208ENST00000418212 VGFO15240 615 aaPredicted RBP16.84■□□□□ 0.29
BDNF-208ENST00000418212 IPO8O15397 1037 aaKnown RBP16.84■□□□□ 0.29
BDNF-208ENST00000418212 MYBBP1AQ9BQG0 1328 aaKnown RBP16.84■□□□□ 0.29
BDNF-208ENST00000418212 APAF1O14727 1248 aa16.84■□□□□ 0.29
BDNF-208ENST00000418212 FAM69CQ0P6D2 419 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms