RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 HECW1Q76N89 1606 aa20.79■□□□□ 0.92
HLA-DMB-258ENST00000418107 CEP162Q5TB80 1403 aa20.78■□□□□ 0.92
HLA-DMB-258ENST00000418107 MAGI2Q86UL8 1455 aa20.78■□□□□ 0.92
HLA-DMB-258ENST00000418107 MLECQ14165 292 aa20.77■□□□□ 0.92
HLA-DMB-258ENST00000418107 PLCH2O75038 1416 aa20.77■□□□□ 0.91
HLA-DMB-258ENST00000418107 SCAPERQ9BY12 1400 aa20.77■□□□□ 0.91
HLA-DMB-258ENST00000418107 ATP1B4Q9UN42 357 aaPredicted RBP20.74■□□□□ 0.91
HLA-DMB-258ENST00000418107 FER1L4A9Z1Z3 1794 aa20.71■□□□□ 0.91
HLA-DMB-258ENST00000418107 FMN1Q68DA7 1419 aa20.69■□□□□ 0.9
HLA-DMB-258ENST00000418107 ATP10AO60312 1499 aa20.69■□□□□ 0.9
HLA-DMB-258ENST00000418107 EFCAB2Q5VUJ9 269 aa20.69■□□□□ 0.9
HLA-DMB-258ENST00000418107 CLIP1P30622 1438 aa20.68■□□□□ 0.9
HLA-DMB-258ENST00000418107 C9orf84Q5VXU9 1444 aa20.68■□□□□ 0.9
HLA-DMB-258ENST00000418107 ARHGAP35Q9NRY4 1499 aa20.67■□□□□ 0.9
HLA-DMB-258ENST00000418107 MYO5CQ9NQX4 1742 aa20.67■□□□□ 0.9
HLA-DMB-258ENST00000418107 KIF14Q15058 1648 aa20.66■□□□□ 0.9
HLA-DMB-258ENST00000418107 ARHGEF12Q9NZN5 1544 aa20.66■□□□□ 0.9
HLA-DMB-258ENST00000418107 CDK11AQ9UQ88 783 aaPredicted RBP20.65■□□□□ 0.9
HLA-DMB-258ENST00000418107 TROQ12816 1431 aaPredicted RBP20.62■□□□□ 0.89
HLA-DMB-258ENST00000418107 ZNF518AQ6AHZ1 1483 aa20.62■□□□□ 0.89
HLA-DMB-258ENST00000418107 ARHGAP5Q13017 1502 aa20.61■□□□□ 0.89
HLA-DMB-258ENST00000418107 CEBPAP49715 358 aaPredicted RBP20.61■□□□□ 0.89
HLA-DMB-258ENST00000418107 AFAP1Q8N556 730 aa20.6■□□□□ 0.89
HLA-DMB-258ENST00000418107 CERKQ8TCT0 537 aa20.6■□□□□ 0.89
HLA-DMB-258ENST00000418107 KDM5CP41229 1560 aa20.58■□□□□ 0.89
HLA-DMB-258ENST00000418107 PREX1Q8TCU6 1659 aa20.58■□□□□ 0.88
HLA-DMB-258ENST00000418107 MYT1LQ9UL68 1186 aa20.57■□□□□ 0.88
HLA-DMB-258ENST00000418107 LRRIQ1Q96JM4 1722 aa20.55■□□□□ 0.88
HLA-DMB-258ENST00000418107 DIP2CQ9Y2E4 1556 aa20.55■□□□□ 0.88
HLA-DMB-258ENST00000418107 ABCA6Q8N139 1617 aa20.51■□□□□ 0.87
HLA-DMB-258ENST00000418107 UHRF1BP1Q6BDS2 1440 aa20.51■□□□□ 0.87
HLA-DMB-258ENST00000418107 CDC42BPBQ9Y5S2 1711 aa20.51■□□□□ 0.87
HLA-DMB-258ENST00000418107 MLH3Q9UHC1 1453 aa20.5■□□□□ 0.87
HLA-DMB-258ENST00000418107 REREQ9P2R6 1566 aa20.49■□□□□ 0.87
HLA-DMB-258ENST00000418107 TRAPPC8Q9Y2L5 1435 aa20.49■□□□□ 0.87
HLA-DMB-258ENST00000418107 PREX2Q70Z35 1606 aa20.48■□□□□ 0.87
HLA-DMB-258ENST00000418107 STRCQ7RTU9 1775 aa20.48■□□□□ 0.87
HLA-DMB-258ENST00000418107 ABCC1P33527 1531 aa20.47■□□□□ 0.87
HLA-DMB-258ENST00000418107 DMRT2Q9Y5R5 561 aa20.46■□□□□ 0.87
HLA-DMB-258ENST00000418107 CASKIN1Q8WXD9 1431 aa20.45■□□□□ 0.86
HLA-DMB-258ENST00000418107 CCDC18Q5T9S5 1454 aa20.45■□□□□ 0.86
HLA-DMB-258ENST00000418107 VPS8Q8N3P4 1428 aa20.44■□□□□ 0.86
HLA-DMB-258ENST00000418107 C3P01024 1663 aa20.44■□□□□ 0.86
HLA-DMB-258ENST00000418107 ITSN2Q9NZM3 1697 aa20.44■□□□□ 0.86
HLA-DMB-258ENST00000418107 AGLP35573 1532 aa20.44■□□□□ 0.86
HLA-DMB-258ENST00000418107 SETD1BQ9UPS6 1966 aaKnown RBP20.43■□□□□ 0.86
HLA-DMB-258ENST00000418107 ESF1Q9H501 851 aaKnown RBP20.43■□□□□ 0.86
HLA-DMB-258ENST00000418107 APLP2Q06481 763 aa20.42■□□□□ 0.86
HLA-DMB-258ENST00000418107 KIDINS220Q9ULH0 1771 aa20.4■□□□□ 0.86
HLA-DMB-258ENST00000418107 PPARGC1BQ86YN6 1023 aaKnown RBP20.4■□□□□ 0.86
HLA-DMB-258ENST00000418107 CDC42BPAQ5VT25 1732 aa20.38■□□□□ 0.85
HLA-DMB-258ENST00000418107 PTPRTO14522 1441 aa20.38■□□□□ 0.85
HLA-DMB-258ENST00000418107 ZNF777Q9ULD5 760 aaPredicted RBP20.37■□□□□ 0.85
HLA-DMB-258ENST00000418107 CNTLNQ9NXG0 1405 aa20.36■□□□□ 0.85
HLA-DMB-258ENST00000418107 FYCO1Q9BQS8 1478 aa20.35■□□□□ 0.85
HLA-DMB-258ENST00000418107 SAMD9LQ8IVG5 1584 aa20.35■□□□□ 0.85
HLA-DMB-258ENST00000418107 SYCP2Q9BX26 1530 aa20.34■□□□□ 0.85
HLA-DMB-258ENST00000418107 NCOA1Q15788 1441 aa20.32■□□□□ 0.84
HLA-DMB-258ENST00000418107 DISP3Q9P2K9 1392 aa20.32■□□□□ 0.84
HLA-DMB-258ENST00000418107 GPATCH8Q9UKJ3 1502 aaKnown RBP20.31■□□□□ 0.84
HLA-DMB-258ENST00000418107 SPAG9O60271 1321 aaKnown RBP20.31■□□□□ 0.84
HLA-DMB-258ENST00000418107 HNRNPMP52272 730 aaKnown RBP eCLIP20.31■□□□□ 0.84
HLA-DMB-258ENST00000418107 LTBP4Q8N2S1 1624 aa20.3■□□□□ 0.84
HLA-DMB-258ENST00000418107 TRIM26Q12899 539 aaPredicted RBP20.3■□□□□ 0.84
HLA-DMB-258ENST00000418107 NPATQ14207 1427 aa20.29■□□□□ 0.84
HLA-DMB-258ENST00000418107 ZMYM3Q14202 1370 aa20.27■□□□□ 0.84
HLA-DMB-258ENST00000418107 MROH2AA6NES4 1674 aa20.27■□□□□ 0.84
HLA-DMB-258ENST00000418107 ILDR2Q71H61 639 aa20.27■□□□□ 0.84
HLA-DMB-258ENST00000418107 PCGF6Q9BYE7 350 aa20.27■□□□□ 0.84
HLA-DMB-258ENST00000418107 SUPT6HQ7KZ85 1726 aaKnown RBP20.27■□□□□ 0.83
HLA-DMB-258ENST00000418107 ATP7AQ04656 1500 aa20.27■□□□□ 0.83
HLA-DMB-258ENST00000418107 CAMSAP1Q5T5Y3 1602 aa20.26■□□□□ 0.83
HLA-DMB-258ENST00000418107 CFDP1Q9UEE9 299 aaPredicted RBP20.25■□□□□ 0.83
HLA-DMB-258ENST00000418107 KIAA1107Q9UPP5 1409 aa20.24■□□□□ 0.83
HLA-DMB-258ENST00000418107 A2MP01023 1474 aa20.23■□□□□ 0.83
HLA-DMB-258ENST00000418107 PLEKHH2Q8IVE3 1493 aa20.23■□□□□ 0.83
HLA-DMB-258ENST00000418107 PLXNC1O60486 1568 aa20.23■□□□□ 0.83
HLA-DMB-258ENST00000418107 INO80Q9ULG1 1556 aaPredicted RBP20.23■□□□□ 0.83
HLA-DMB-258ENST00000418107 CCNB3Q8WWL7 1395 aa20.22■□□□□ 0.83
HLA-DMB-258ENST00000418107 CLTCQ00610 1675 aaKnown RBP20.22■□□□□ 0.83
HLA-DMB-258ENST00000418107 NCKAP5LQ9HCH0 1330 aa20.22■□□□□ 0.83
HLA-DMB-258ENST00000418107 IQSEC2Q5JU85 1478 aa20.21■□□□□ 0.83
HLA-DMB-258ENST00000418107 GGT6Q6P531 493 aa20.2■□□□□ 0.82
HLA-DMB-258ENST00000418107 MTUS2Q5JR59 1369 aa20.19■□□□□ 0.82
HLA-DMB-258ENST00000418107 SPATA31D1Q6ZQQ2 1576 aa20.19■□□□□ 0.82
HLA-DMB-258ENST00000418107 MYO3AQ8NEV4 1616 aa20.18■□□□□ 0.82
HLA-DMB-258ENST00000418107 PTPRKQ15262 1439 aa20.18■□□□□ 0.82
HLA-DMB-258ENST00000418107 ZNF335Q9H4Z2 1342 aaPredicted RBP20.17■□□□□ 0.82
HLA-DMB-258ENST00000418107 ZNF142P52746 1687 aaPredicted RBP20.16■□□□□ 0.82
HLA-DMB-258ENST00000418107 ZNF644Q9H582 1327 aaPredicted RBP20.16■□□□□ 0.82
HLA-DMB-258ENST00000418107 CEP170BQ9Y4F5 1589 aaPredicted RBP20.15■□□□□ 0.82
HLA-DMB-258ENST00000418107 SOCS7O14512 581 aa20.15■□□□□ 0.82
HLA-DMB-258ENST00000418107 PLA2R1Q13018 1463 aa20.14■□□□□ 0.82
HLA-DMB-258ENST00000418107 TIAM1Q13009 1591 aa20.13■□□□□ 0.81
HLA-DMB-258ENST00000418107 PKD2Q13563 968 aa20.13■□□□□ 0.81
HLA-DMB-258ENST00000418107 TCOF1Q13428 1488 aaKnown RBP20.13■□□□□ 0.81
HLA-DMB-258ENST00000418107 ADGBQ8N7X0 1667 aa20.12■□□□□ 0.81
HLA-DMB-258ENST00000418107 MBD5Q9P267 1494 aa20.11■□□□□ 0.81
HLA-DMB-258ENST00000418107 PPP6R1Q9UPN7 881 aa20.1■□□□□ 0.81
HLA-DMB-258ENST00000418107 EHBP1L1Q8N3D4 1523 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms