RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 CDC42BPAQ5VT25 1732 aa24.65■■□□□ 1.54
SSBP3-205ENST00000417664 ABCC5O15440 1437 aa24.64■■□□□ 1.54
SSBP3-205ENST00000417664 MAPKBP1O60336 1514 aa24.62■■□□□ 1.53
SSBP3-205ENST00000417664 ZNF644Q9H582 1327 aaPredicted RBP24.6■■□□□ 1.53
SSBP3-205ENST00000417664 ZCCHC11Q5TAX3 1644 aaKnown RBP24.59■■□□□ 1.53
SSBP3-205ENST00000417664 CHIC2Q9UKJ5 165 aa24.57■■□□□ 1.52
SSBP3-205ENST00000417664 PREX2Q70Z35 1606 aa24.55■■□□□ 1.52
SSBP3-205ENST00000417664 RRP7BPQ9NSQ0 103 aa24.55■■□□□ 1.52
SSBP3-205ENST00000417664 ADGRL2O95490 1459 aa24.53■■□□□ 1.52
SSBP3-205ENST00000417664 CROCC2H7BZ55 1655 aa24.52■■□□□ 1.52
SSBP3-205ENST00000417664 ZNF777Q9ULD5 760 aaPredicted RBP24.52■■□□□ 1.52
SSBP3-205ENST00000417664 SHANK2Q9UPX8 1470 aa24.52■■□□□ 1.52
SSBP3-205ENST00000417664 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.51■■□□□ 1.517e-9■■■■□ 24.1
SSBP3-205ENST00000417664 TIMELESSQ9UNS1 1208 aa24.51■■□□□ 1.51
SSBP3-205ENST00000417664 ADGBQ8N7X0 1667 aa24.5■■□□□ 1.51
SSBP3-205ENST00000417664 RSPH4AQ5TD94 716 aa24.5■■□□□ 1.51
SSBP3-205ENST00000417664 ARHGEF5Q12774 1597 aa24.49■■□□□ 1.51
SSBP3-205ENST00000417664 CDC42BPBQ9Y5S2 1711 aa24.49■■□□□ 1.51
SSBP3-205ENST00000417664 NCOA1Q15788 1441 aa24.48■■□□□ 1.51
SSBP3-205ENST00000417664 TTC37Q6PGP7 1564 aa24.48■■□□□ 1.51
SSBP3-205ENST00000417664 ANKRD30AQ9BXX3 1397 aa24.46■■□□□ 1.51
SSBP3-205ENST00000417664 MYO5CQ9NQX4 1742 aa24.46■■□□□ 1.51
SSBP3-205ENST00000417664 PLEKHH2Q8IVE3 1493 aa24.44■■□□□ 1.5
SSBP3-205ENST00000417664 SAMD9LQ8IVG5 1584 aa24.43■■□□□ 1.5
SSBP3-205ENST00000417664 MBD5Q9P267 1494 aa24.42■■□□□ 1.5
SSBP3-205ENST00000417664 TSPY4P0CV99 314 aa24.42■■□□□ 1.5
SSBP3-205ENST00000417664 TSPY10P0CW01 314 aa24.42■■□□□ 1.5
SSBP3-205ENST00000417664 ARHGAP5Q13017 1502 aa24.42■■□□□ 1.5
SSBP3-205ENST00000417664 PLCH2O75038 1416 aa24.41■■□□□ 1.5
SSBP3-205ENST00000417664 KIAA1107Q9UPP5 1409 aa24.41■■□□□ 1.5
SSBP3-205ENST00000417664 WDR7Q9Y4E6 1490 aa24.4■■□□□ 1.5
SSBP3-205ENST00000417664 ZNF316A6NFI3 1004 aaPredicted RBP24.4■■□□□ 1.5
SSBP3-205ENST00000417664 KDM6BO15054 1643 aa24.4■■□□□ 1.5
SSBP3-205ENST00000417664 ARAP3Q8WWN8 1544 aa24.4■■□□□ 1.5
SSBP3-205ENST00000417664 CCDC141Q6ZP82 1450 aa24.4■■□□□ 1.5
SSBP3-205ENST00000417664 C9orf84Q5VXU9 1444 aa24.4■■□□□ 1.5
SSBP3-205ENST00000417664 KCNH8Q96L42 1107 aa24.39■■□□□ 1.49
SSBP3-205ENST00000417664 TRIM52Q96A61 297 aa24.37■■□□□ 1.49
SSBP3-205ENST00000417664 HNRNPMP52272 730 aaKnown RBP eCLIP24.34■■□□□ 1.491e-6■■■■□ 26.1
SSBP3-205ENST00000417664 EFCAB2Q5VUJ9 269 aa24.34■■□□□ 1.49
SSBP3-205ENST00000417664 MAST1Q9Y2H9 1570 aa24.32■■□□□ 1.48
SSBP3-205ENST00000417664 NPM1P06748 294 aaKnown RBP eCLIP24.32■■□□□ 1.48
SSBP3-205ENST00000417664 SIN3AQ96ST3 1273 aa24.32■■□□□ 1.48
SSBP3-205ENST00000417664 MPHOSPH9Q99550 1183 aa24.32■■□□□ 1.48
SSBP3-205ENST00000417664 ANKRD50Q9ULJ7 1429 aa24.31■■□□□ 1.48
SSBP3-205ENST00000417664 SYCP2Q9BX26 1530 aa24.31■■□□□ 1.48
SSBP3-205ENST00000417664 ASXL2Q76L83 1435 aa24.29■■□□□ 1.48
SSBP3-205ENST00000417664 NEUROD1Q13562 356 aa24.29■■□□□ 1.48
SSBP3-205ENST00000417664 ABCA9Q8IUA7 1624 aa24.28■■□□□ 1.48
SSBP3-205ENST00000417664 DENND4BO75064 1496 aaPredicted RBP24.28■■□□□ 1.48
SSBP3-205ENST00000417664 KIF15Q9NS87 1388 aa24.26■■□□□ 1.47
SSBP3-205ENST00000417664 ABCC1P33527 1531 aa24.24■■□□□ 1.47
SSBP3-205ENST00000417664 TONSLQ96HA7 1378 aa24.23■■□□□ 1.47
SSBP3-205ENST00000417664 PLXNC1O60486 1568 aa24.22■■□□□ 1.47
SSBP3-205ENST00000417664 DIEXFQ68CQ4 756 aaKnown RBP24.21■■□□□ 1.47
SSBP3-205ENST00000417664 SLC4A1APQ9BWU0 796 aaKnown RBP24.21■■□□□ 1.47
SSBP3-205ENST00000417664 PZPP20742 1482 aa24.2■■□□□ 1.46
SSBP3-205ENST00000417664 PPP1R15AO75807 674 aaPredicted RBP24.2■■□□□ 1.46
SSBP3-205ENST00000417664 KDM5DQ9BY66 1539 aa24.19■■□□□ 1.46
SSBP3-205ENST00000417664 ARHGEF12Q9NZN5 1544 aa24.19■■□□□ 1.46
SSBP3-205ENST00000417664 ANKRD30BQ9BXX2 1392 aa24.17■■□□□ 1.46
SSBP3-205ENST00000417664 FANCAO15360 1455 aa24.15■■□□□ 1.46
SSBP3-205ENST00000417664 RTEL1-TNFRSF6BF6WH68 1400 aa24.14■■□□□ 1.46
SSBP3-205ENST00000417664 DUOX2Q9NRD8 1548 aa24.13■■□□□ 1.45
SSBP3-205ENST00000417664 NUP155O75694 1391 aa24.11■■□□□ 1.45
SSBP3-205ENST00000417664 TRAPPC8Q9Y2L5 1435 aa24.1■■□□□ 1.45
SSBP3-205ENST00000417664 RPRD2Q5VT52 1461 aaKnown RBP24.1■■□□□ 1.45
SSBP3-205ENST00000417664 ERBINQ96RT1 1412 aa24.09■■□□□ 1.45
SSBP3-205ENST00000417664 CFAP74Q9C0B2 1584 aa24.07■■□□□ 1.44
SSBP3-205ENST00000417664 SPAG9O60271 1321 aaKnown RBP24.06■■□□□ 1.44
SSBP3-205ENST00000417664 RIMBP3CA6NJZ7 1639 aa24.06■■□□□ 1.44
SSBP3-205ENST00000417664 RIMBP3BA6NNM3 1639 aa24.06■■□□□ 1.44
SSBP3-205ENST00000417664 RIMBP3Q9UFD9 1639 aa24.06■■□□□ 1.44
SSBP3-205ENST00000417664 ADGRL1O94910 1474 aa24.06■■□□□ 1.44
SSBP3-205ENST00000417664 UNC13BO14795 1591 aa24.05■■□□□ 1.44
SSBP3-205ENST00000417664 PKD2Q13563 968 aa24.05■■□□□ 1.44
SSBP3-205ENST00000417664 CD109Q6YHK3 1445 aa24.04■■□□□ 1.44
SSBP3-205ENST00000417664 FOXD1Q16676 465 aa24.04■■□□□ 1.44
SSBP3-205ENST00000417664 ZFYVE16Q7Z3T8 1539 aa24.02■■□□□ 1.44
SSBP3-205ENST00000417664 SCAPERQ9BY12 1400 aa24.01■■□□□ 1.43
SSBP3-205ENST00000417664 FAM135AQ9P2D6 1515 aa24■■□□□ 1.43
SSBP3-205ENST00000417664 CYB5RLQ6IPT4 315 aa23.99■■□□□ 1.43
SSBP3-205ENST00000417664 AFAP1Q8N556 730 aa23.99■■□□□ 1.43
SSBP3-205ENST00000417664 MAGI2Q86UL8 1455 aa23.99■■□□□ 1.43
SSBP3-205ENST00000417664 INO80Q9ULG1 1556 aaPredicted RBP23.99■■□□□ 1.43
SSBP3-205ENST00000417664 ATP7AQ04656 1500 aa23.97■■□□□ 1.43
SSBP3-205ENST00000417664 IQGAP3Q86VI3 1631 aa23.96■■□□□ 1.43
SSBP3-205ENST00000417664 ZNF518AQ6AHZ1 1483 aa23.96■■□□□ 1.43
SSBP3-205ENST00000417664 TEX14Q8IWB6 1497 aa23.95■■□□□ 1.42
SSBP3-205ENST00000417664 L3MBTL2Q969R5 705 aa23.95■■□□□ 1.42
SSBP3-205ENST00000417664 NEO1Q92859 1461 aa23.94■■□□□ 1.42
SSBP3-205ENST00000417664 GLI2P10070 1586 aa23.93■■□□□ 1.42
SSBP3-205ENST00000417664 POGZQ7Z3K3 1410 aa23.88■■□□□ 1.41
SSBP3-205ENST00000417664 KDM5CP41229 1560 aa23.88■■□□□ 1.41
SSBP3-205ENST00000417664 EIF2AK4Q9P2K8 1649 aaKnown RBP23.87■■□□□ 1.41
SSBP3-205ENST00000417664 MAP3K4Q9Y6R4 1608 aa23.87■■□□□ 1.41
SSBP3-205ENST00000417664 DHX29Q7Z478 1369 aaKnown RBP23.86■■□□□ 1.41
SSBP3-205ENST00000417664 DEPDC5O75140 1603 aa23.85■■□□□ 1.41
SSBP3-205ENST00000417664 MLH3Q9UHC1 1453 aa23.85■■□□□ 1.41
SSBP3-205ENST00000417664 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms