RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 ZNF644Q9H582 1327 aaPredicted RBP17.86■□□□□ 0.45
LRRTM1-205ENST00000417012 KDM6BO15054 1643 aa17.85■□□□□ 0.45
LRRTM1-205ENST00000417012 PLB1Q6P1J6 1458 aa17.84■□□□□ 0.45
LRRTM1-205ENST00000417012 MIA2Q96PC5 1412 aa17.83■□□□□ 0.44
LRRTM1-205ENST00000417012 JPH4Q96JJ6 628 aa17.82■□□□□ 0.44
LRRTM1-205ENST00000417012 PRG4Q92954 1404 aaPredicted RBP17.81■□□□□ 0.44
LRRTM1-205ENST00000417012 GCC2Q8IWJ2 1684 aa17.8■□□□□ 0.44
LRRTM1-205ENST00000417012 HNRNPUQ00839 825 aaKnown RBP eCLIP17.8■□□□□ 0.44
LRRTM1-205ENST00000417012 FOXD1Q16676 465 aa17.79■□□□□ 0.44
LRRTM1-205ENST00000417012 CDK11AQ9UQ88 783 aaPredicted RBP17.79■□□□□ 0.44
LRRTM1-205ENST00000417012 KDM5BQ9UGL1 1544 aa17.79■□□□□ 0.44
LRRTM1-205ENST00000417012 DENND4BO75064 1496 aaPredicted RBP17.78■□□□□ 0.44
LRRTM1-205ENST00000417012 DAPK1P53355 1430 aa17.76■□□□□ 0.43
LRRTM1-205ENST00000417012 NUP160Q12769 1436 aa17.75■□□□□ 0.43
LRRTM1-205ENST00000417012 ZNF777Q9ULD5 760 aaPredicted RBP17.75■□□□□ 0.43
LRRTM1-205ENST00000417012 MPHOSPH9Q99550 1183 aa17.74■□□□□ 0.43
LRRTM1-205ENST00000417012 ABCC5O15440 1437 aa17.74■□□□□ 0.43
LRRTM1-205ENST00000417012 CARMIL2Q6F5E8 1435 aa17.74■□□□□ 0.43
LRRTM1-205ENST00000417012 TROQ12816 1431 aaPredicted RBP17.72■□□□□ 0.43
LRRTM1-205ENST00000417012 AKNAQ7Z591 1439 aa17.72■□□□□ 0.43
LRRTM1-205ENST00000417012 CFDP1Q9UEE9 299 aaPredicted RBP17.72■□□□□ 0.43
LRRTM1-205ENST00000417012 KIF14Q15058 1648 aa17.72■□□□□ 0.43
LRRTM1-205ENST00000417012 HSPA5P11021 654 aaKnown RBP17.72■□□□□ 0.43
LRRTM1-205ENST00000417012 WASHC2AQ641Q2 1341 aa17.72■□□□□ 0.43
LRRTM1-205ENST00000417012 DNMT1P26358 1616 aaKnown RBP17.71■□□□□ 0.43
LRRTM1-205ENST00000417012 EIF4G2P78344 907 aaKnown RBP eCLIP17.69■□□□□ 0.42
LRRTM1-205ENST00000417012 CAMSAP2Q08AD1 1489 aa17.67■□□□□ 0.42
LRRTM1-205ENST00000417012 GPATCH8Q9UKJ3 1502 aaKnown RBP17.67■□□□□ 0.42
LRRTM1-205ENST00000417012 CNTLNQ9NXG0 1405 aa17.67■□□□□ 0.42
LRRTM1-205ENST00000417012 IRX6P78412 446 aaPredicted RBP17.67■□□□□ 0.42
LRRTM1-205ENST00000417012 ROCK1Q13464 1354 aa17.66■□□□□ 0.42
LRRTM1-205ENST00000417012 ERICH6BQ5W0A0 696 aa17.66■□□□□ 0.42
LRRTM1-205ENST00000417012 FANCIQ9NVI1 1328 aa17.64■□□□□ 0.41
LRRTM1-205ENST00000417012 PLEKHD1A6NEE1 506 aa17.64■□□□□ 0.41
LRRTM1-205ENST00000417012 L3MBTL2Q969R5 705 aa17.63■□□□□ 0.41
LRRTM1-205ENST00000417012 SLC4A1APQ9BWU0 796 aaKnown RBP17.63■□□□□ 0.41
LRRTM1-205ENST00000417012 ITSN2Q9NZM3 1697 aa17.62■□□□□ 0.41
LRRTM1-205ENST00000417012 ATP10BO94823 1461 aa17.62■□□□□ 0.41
LRRTM1-205ENST00000417012 ABCA8O94911 1581 aa17.62■□□□□ 0.41
LRRTM1-205ENST00000417012 ADCY10Q96PN6 1610 aa17.61■□□□□ 0.41
LRRTM1-205ENST00000417012 MSH5O43196 834 aa17.61■□□□□ 0.41
LRRTM1-205ENST00000417012 PPP4R2Q9NY27 417 aa17.59■□□□□ 0.41
LRRTM1-205ENST00000417012 NCOA1Q15788 1441 aa17.59■□□□□ 0.41
LRRTM1-205ENST00000417012 CCDC7Q96M83 1385 aa17.58■□□□□ 0.41
LRRTM1-205ENST00000417012 ANKRD30BQ9BXX2 1392 aa17.58■□□□□ 0.41
LRRTM1-205ENST00000417012 ERICH6Q7L0X2 663 aa17.58■□□□□ 0.4
LRRTM1-205ENST00000417012 CDC42BPAQ5VT25 1732 aa17.57■□□□□ 0.4
LRRTM1-205ENST00000417012 PRKRIP1Q9H875 184 aaPredicted RBP17.57■□□□□ 0.4
LRRTM1-205ENST00000417012 CHD1O14646 1710 aa17.57■□□□□ 0.4
LRRTM1-205ENST00000417012 PTPRGP23470 1445 aa17.56■□□□□ 0.4
LRRTM1-205ENST00000417012 CCDC184Q52MB2 194 aa17.56■□□□□ 0.4
LRRTM1-205ENST00000417012 MRS2Q9HD23 443 aa17.56■□□□□ 0.4
LRRTM1-205ENST00000417012 FAM9BQ8IZU0 186 aa17.55■□□□□ 0.4
LRRTM1-205ENST00000417012 ADGBQ8N7X0 1667 aa17.54■□□□□ 0.4
LRRTM1-205ENST00000417012 ZBED9Q6R2W3 1325 aa17.54■□□□□ 0.4
LRRTM1-205ENST00000417012 CROCC2H7BZ55 1655 aa17.54■□□□□ 0.4
LRRTM1-205ENST00000417012 ABCC10Q5T3U5 1492 aa17.54■□□□□ 0.4
LRRTM1-205ENST00000417012 NBPF8Q3BBV2 869 aa17.53■□□□□ 0.4
LRRTM1-205ENST00000417012 PZPP20742 1482 aa17.53■□□□□ 0.4
LRRTM1-205ENST00000417012 RPRD2Q5VT52 1461 aaKnown RBP17.53■□□□□ 0.4
LRRTM1-205ENST00000417012 C11orf95C9JLR9 678 aaPredicted RBP17.53■□□□□ 0.4
LRRTM1-205ENST00000417012 HNRNPMP52272 730 aaKnown RBP eCLIP17.52■□□□□ 0.4
LRRTM1-205ENST00000417012 ANKRD30AQ9BXX3 1397 aa17.51■□□□□ 0.39
LRRTM1-205ENST00000417012 TEX14Q8IWB6 1497 aa17.5■□□□□ 0.39
LRRTM1-205ENST00000417012 ADGRL2O95490 1459 aa17.49■□□□□ 0.39
LRRTM1-205ENST00000417012 PKD2Q13563 968 aa17.48■□□□□ 0.39
LRRTM1-205ENST00000417012 ANKRD50Q9ULJ7 1429 aa17.48■□□□□ 0.39
LRRTM1-205ENST00000417012 POLR1AO95602 1720 aaPredicted RBP17.48■□□□□ 0.39
LRRTM1-205ENST00000417012 ERCC6L2Q5T890 1561 aa17.47■□□□□ 0.39
LRRTM1-205ENST00000417012 KIF7Q2M1P5 1343 aa17.47■□□□□ 0.39
LRRTM1-205ENST00000417012 C9orf84Q5VXU9 1444 aa17.47■□□□□ 0.39
LRRTM1-205ENST00000417012 TSPY4P0CV99 314 aa17.46■□□□□ 0.39
LRRTM1-205ENST00000417012 TSPY10P0CW01 314 aa17.46■□□□□ 0.39
LRRTM1-205ENST00000417012 B4GALNT3Q6L9W6 998 aa17.45■□□□□ 0.38
LRRTM1-205ENST00000417012 SPATA31E1Q6ZUB1 1445 aa17.45■□□□□ 0.38
LRRTM1-205ENST00000417012 ZNF326Q5BKZ1 582 aaKnown RBP17.45■□□□□ 0.38
LRRTM1-205ENST00000417012 NUP155O75694 1391 aa17.43■□□□□ 0.38
LRRTM1-205ENST00000417012 KIAA1107Q9UPP5 1409 aa17.43■□□□□ 0.38
LRRTM1-205ENST00000417012 CDC42BPBQ9Y5S2 1711 aa17.42■□□□□ 0.38
LRRTM1-205ENST00000417012 SAMD9LQ8IVG5 1584 aa17.4■□□□□ 0.38
LRRTM1-205ENST00000417012 KIF15Q9NS87 1388 aa17.4■□□□□ 0.38
LRRTM1-205ENST00000417012 SHROOM2Q13796 1616 aa17.4■□□□□ 0.38
LRRTM1-205ENST00000417012 MBD5Q9P267 1494 aa17.39■□□□□ 0.37
LRRTM1-205ENST00000417012 SHANK2Q9UPX8 1470 aa17.39■□□□□ 0.37
LRRTM1-205ENST00000417012 MYT1LQ9UL68 1186 aa17.38■□□□□ 0.37
LRRTM1-205ENST00000417012 SMG6Q86US8 1419 aaKnown RBP17.37■□□□□ 0.37
LRRTM1-205ENST00000417012 TTC37Q6PGP7 1564 aa17.37■□□□□ 0.37
LRRTM1-205ENST00000417012 PREX2Q70Z35 1606 aa17.37■□□□□ 0.37
LRRTM1-205ENST00000417012 ARHGAP5Q13017 1502 aa17.34■□□□□ 0.37
LRRTM1-205ENST00000417012 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.34■□□□□ 0.37
LRRTM1-205ENST00000417012 ARHGEF5Q12774 1597 aa17.34■□□□□ 0.37
LRRTM1-205ENST00000417012 CCDC141Q6ZP82 1450 aa17.34■□□□□ 0.37
LRRTM1-205ENST00000417012 SYCP2Q9BX26 1530 aa17.34■□□□□ 0.37
LRRTM1-205ENST00000417012 DHX29Q7Z478 1369 aaKnown RBP17.33■□□□□ 0.37
LRRTM1-205ENST00000417012 NUDCQ9Y266 331 aa17.33■□□□□ 0.37
LRRTM1-205ENST00000417012 USP47Q96K76 1375 aa17.33■□□□□ 0.36
LRRTM1-205ENST00000417012 POLR3GLQ9BT43 218 aa17.32■□□□□ 0.36
LRRTM1-205ENST00000417012 KDM2AQ9Y2K7 1162 aa17.32■□□□□ 0.36
LRRTM1-205ENST00000417012 ABCC2Q92887 1545 aa17.32■□□□□ 0.36
LRRTM1-205ENST00000417012 CNGB1Q14028 1251 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms