RNA–Protein interactions for RNA: ENST00000416248.5

HDAC11-208, Transcript of histone deacetylase 11, humanhuman

TSL 4

Gene HDAC11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-208ENST00000416248 SCAPERQ9BY12 1400 aa31.92■■■□□ 2.7
HDAC11-208ENST00000416248 MLECQ14165 292 aa31.86■■■□□ 2.69
HDAC11-208ENST00000416248 MYO5CQ9NQX4 1742 aa31.86■■■□□ 2.69
HDAC11-208ENST00000416248 ATP10AO60312 1499 aa31.83■■■□□ 2.69
HDAC11-208ENST00000416248 ARHGEF12Q9NZN5 1544 aa31.82■■■□□ 2.68
HDAC11-208ENST00000416248 FMN1Q68DA7 1419 aa31.82■■■□□ 2.68
HDAC11-208ENST00000416248 C9orf84Q5VXU9 1444 aa31.81■■■□□ 2.68
HDAC11-208ENST00000416248 EFCAB2Q5VUJ9 269 aa31.79■■■□□ 2.68
HDAC11-208ENST00000416248 KIF14Q15058 1648 aa31.76■■■□□ 2.67
HDAC11-208ENST00000416248 ATP1B4Q9UN42 357 aaPredicted RBP31.76■■■□□ 2.67
HDAC11-208ENST00000416248 CDK11AQ9UQ88 783 aaPredicted RBP31.75■■■□□ 2.67
HDAC11-208ENST00000416248 PREX1Q8TCU6 1659 aa31.75■■■□□ 2.67
HDAC11-208ENST00000416248 ARHGAP35Q9NRY4 1499 aa31.74■■■□□ 2.67
HDAC11-208ENST00000416248 ZNF518AQ6AHZ1 1483 aa31.73■■■□□ 2.67
HDAC11-208ENST00000416248 UBTFP17480 764 aaKnown RBP31.73■■■□□ 2.67
HDAC11-208ENST00000416248 CERKQ8TCT0 537 aa31.72■■■□□ 2.67
HDAC11-208ENST00000416248 KDM5CP41229 1560 aa31.7■■■□□ 2.67
HDAC11-208ENST00000416248 TROQ12816 1431 aaPredicted RBP31.69■■■□□ 2.66
HDAC11-208ENST00000416248 ARHGAP5Q13017 1502 aa31.69■■■□□ 2.66
HDAC11-208ENST00000416248 EHMT2Q96KQ7 1210 aa31.68■■■□□ 2.66
HDAC11-208ENST00000416248 CLIP1P30622 1438 aa31.65■■■□□ 2.66
HDAC11-208ENST00000416248 LRRIQ1Q96JM4 1722 aa31.64■■■□□ 2.66
HDAC11-208ENST00000416248 CEBPAP49715 358 aaPredicted RBP31.64■■■□□ 2.66
HDAC11-208ENST00000416248 AFAP1Q8N556 730 aa31.63■■■□□ 2.65
HDAC11-208ENST00000416248 DIP2CQ9Y2E4 1556 aa31.61■■■□□ 2.65
HDAC11-208ENST00000416248 REREQ9P2R6 1566 aa31.6■■■□□ 2.65
HDAC11-208ENST00000416248 STRCQ7RTU9 1775 aa31.59■■■□□ 2.65
HDAC11-208ENST00000416248 CDC42BPBQ9Y5S2 1711 aa31.59■■■□□ 2.65
HDAC11-208ENST00000416248 SETD1BQ9UPS6 1966 aaKnown RBP31.57■■■□□ 2.65
HDAC11-208ENST00000416248 UHRF1BP1Q6BDS2 1440 aa31.56■■■□□ 2.64
HDAC11-208ENST00000416248 ABCA6Q8N139 1617 aa31.56■■■□□ 2.64
HDAC11-208ENST00000416248 MYT1LQ9UL68 1186 aa31.55■■■□□ 2.64
HDAC11-208ENST00000416248 MLH3Q9UHC1 1453 aa31.54■■■□□ 2.64
HDAC11-208ENST00000416248 DMRT2Q9Y5R5 561 aa31.53■■■□□ 2.64
HDAC11-208ENST00000416248 PREX2Q70Z35 1606 aa31.53■■■□□ 2.64
HDAC11-208ENST00000416248 C3P01024 1663 aa31.51■■■□□ 2.63
HDAC11-208ENST00000416248 ABCC1P33527 1531 aa31.5■■■□□ 2.63
HDAC11-208ENST00000416248 AGLP35573 1532 aa31.49■■■□□ 2.63
HDAC11-208ENST00000416248 ITSN2Q9NZM3 1697 aa31.48■■■□□ 2.63
HDAC11-208ENST00000416248 TRAPPC8Q9Y2L5 1435 aa31.47■■■□□ 2.63
HDAC11-208ENST00000416248 CCDC18Q5T9S5 1454 aa31.46■■■□□ 2.63
HDAC11-208ENST00000416248 CASKIN1Q8WXD9 1431 aa31.42■■■□□ 2.62
HDAC11-208ENST00000416248 KIDINS220Q9ULH0 1771 aa31.41■■■□□ 2.62
HDAC11-208ENST00000416248 ESF1Q9H501 851 aaKnown RBP31.4■■■□□ 2.62
HDAC11-208ENST00000416248 CDC42BPAQ5VT25 1732 aa31.4■■■□□ 2.62
HDAC11-208ENST00000416248 PTPRTO14522 1441 aa31.4■■■□□ 2.62
HDAC11-208ENST00000416248 CHIC1Q5VXU3 224 aa31.37■■■□□ 2.61
HDAC11-208ENST00000416248 CNTLNQ9NXG0 1405 aa31.35■■■□□ 2.61
HDAC11-208ENST00000416248 SAMD9LQ8IVG5 1584 aa31.3■■■□□ 2.6
HDAC11-208ENST00000416248 FYCO1Q9BQS8 1478 aa31.29■■■□□ 2.6
HDAC11-208ENST00000416248 NCOA1Q15788 1441 aa31.28■■■□□ 2.6
HDAC11-208ENST00000416248 MROH2AA6NES4 1674 aa31.28■■■□□ 2.6
HDAC11-208ENST00000416248 DISP3Q9P2K9 1392 aa31.27■■■□□ 2.6
HDAC11-208ENST00000416248 LTBP4Q8N2S1 1624 aa31.27■■■□□ 2.6
HDAC11-208ENST00000416248 SYCP2Q9BX26 1530 aa31.25■■■□□ 2.59
HDAC11-208ENST00000416248 NPATQ14207 1427 aa31.24■■■□□ 2.59
HDAC11-208ENST00000416248 ZNF777Q9ULD5 760 aaPredicted RBP31.23■■■□□ 2.59
HDAC11-208ENST00000416248 GPATCH8Q9UKJ3 1502 aaKnown RBP31.21■■■□□ 2.59
HDAC11-208ENST00000416248 SUPT6HQ7KZ85 1726 aaKnown RBP31.21■■■□□ 2.59
HDAC11-208ENST00000416248 IQSEC2Q5JU85 1478 aa31.21■■■□□ 2.59
HDAC11-208ENST00000416248 SPAG9O60271 1321 aaKnown RBP31.2■■■□□ 2.58
HDAC11-208ENST00000416248 CAMSAP1Q5T5Y3 1602 aa31.2■■■□□ 2.58
HDAC11-208ENST00000416248 ZMYM3Q14202 1370 aa31.18■■■□□ 2.58
HDAC11-208ENST00000416248 ILDR2Q71H61 639 aa31.18■■■□□ 2.58
HDAC11-208ENST00000416248 ATP7AQ04656 1500 aa31.17■■■□□ 2.58
HDAC11-208ENST00000416248 HNRNPMP52272 730 aaKnown RBP eCLIP31.16■■■□□ 2.58
HDAC11-208ENST00000416248 PLXNC1O60486 1568 aa31.15■■■□□ 2.58
HDAC11-208ENST00000416248 INO80Q9ULG1 1556 aaPredicted RBP31.15■■■□□ 2.58
HDAC11-208ENST00000416248 KIAA1107Q9UPP5 1409 aa31.15■■■□□ 2.58
HDAC11-208ENST00000416248 CLTCQ00610 1675 aaKnown RBP31.13■■■□□ 2.57
HDAC11-208ENST00000416248 PLEKHH2Q8IVE3 1493 aa31.13■■■□□ 2.57
HDAC11-208ENST00000416248 SPATA31D1Q6ZQQ2 1576 aa31.13■■■□□ 2.57
HDAC11-208ENST00000416248 ZNF142P52746 1687 aaPredicted RBP31.1■■■□□ 2.57
HDAC11-208ENST00000416248 MYO3AQ8NEV4 1616 aa31.09■■■□□ 2.57
HDAC11-208ENST00000416248 A2MP01023 1474 aa31.09■■■□□ 2.57
HDAC11-208ENST00000416248 CFDP1Q9UEE9 299 aaPredicted RBP31.09■■■□□ 2.57
HDAC11-208ENST00000416248 SOCS7O14512 581 aa31.08■■■□□ 2.57
HDAC11-208ENST00000416248 CCNB3Q8WWL7 1395 aa31.06■■■□□ 2.56
HDAC11-208ENST00000416248 NCKAP5LQ9HCH0 1330 aa31.05■■■□□ 2.56
HDAC11-208ENST00000416248 PLA2R1Q13018 1463 aa31.04■■■□□ 2.56
HDAC11-208ENST00000416248 PTPRKQ15262 1439 aa31.04■■■□□ 2.56
HDAC11-208ENST00000416248 CEP170BQ9Y4F5 1589 aaPredicted RBP31.04■■■□□ 2.56
HDAC11-208ENST00000416248 ADGBQ8N7X0 1667 aa31.03■■■□□ 2.56
HDAC11-208ENST00000416248 ZNF335Q9H4Z2 1342 aaPredicted RBP31■■■□□ 2.55
HDAC11-208ENST00000416248 PKD2Q13563 968 aa31■■■□□ 2.55
HDAC11-208ENST00000416248 GGT6Q6P531 493 aa31■■■□□ 2.55
HDAC11-208ENST00000416248 TCOF1Q13428 1488 aaKnown RBP31■■■□□ 2.55
HDAC11-208ENST00000416248 MTUS2Q5JR59 1369 aa30.99■■■□□ 2.55
HDAC11-208ENST00000416248 PPP6R1Q9UPN7 881 aa30.97■■■□□ 2.55
HDAC11-208ENST00000416248 TIAM1Q13009 1591 aa30.94■■■□□ 2.54
HDAC11-208ENST00000416248 MBD5Q9P267 1494 aa30.91■■■□□ 2.54
HDAC11-208ENST00000416248 ZNF644Q9H582 1327 aaPredicted RBP30.91■■■□□ 2.54
HDAC11-208ENST00000416248 UBAP1LF5GYI3 381 aa30.9■■■□□ 2.54
HDAC11-208ENST00000416248 EHBP1L1Q8N3D4 1523 aa30.88■■■□□ 2.53
HDAC11-208ENST00000416248 RTEL1-TNFRSF6BF6WH68 1400 aa30.88■■■□□ 2.53
HDAC11-208ENST00000416248 A2ML1A8K2U0 1454 aa30.88■■■□□ 2.53
HDAC11-208ENST00000416248 DNMT1P26358 1616 aaKnown RBP30.87■■■□□ 2.53
HDAC11-208ENST00000416248 DHX29Q7Z478 1369 aaKnown RBP30.83■■■□□ 2.53
HDAC11-208ENST00000416248 CEP162Q5TB80 1403 aa30.81■■■□□ 2.52
HDAC11-208ENST00000416248 POLR1AO95602 1720 aaPredicted RBP30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms